RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 FOXD4L4Q8WXT5 416 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF11A-205ENST00000616710 ZNF644Q9H582 1327 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF11A-205ENST00000616710 NAIPQ13075 1403 aa17.73■□□□□ 0.43
TNFRSF11A-205ENST00000616710 FTSJ3Q8IY81 847 aaKnown RBP17.72■□□□□ 0.43
TNFRSF11A-205ENST00000616710 CHMP5Q9NZZ3 219 aa17.72■□□□□ 0.43
TNFRSF11A-205ENST00000616710 IGHDP01880 384 aa17.71■□□□□ 0.43
TNFRSF11A-205ENST00000616710 DDX49Q9Y6V7 483 aaKnown RBP17.71■□□□□ 0.43
TNFRSF11A-205ENST00000616710 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
TNFRSF11A-205ENST00000616710 IGF1RP08069 1367 aa17.69■□□□□ 0.42
TNFRSF11A-205ENST00000616710 BCL11BQ9C0K0 894 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF11A-205ENST00000616710 PDCL3Q9H2J4 239 aa17.69■□□□□ 0.42
TNFRSF11A-205ENST00000616710 HFM1A2PYH4 1435 aa17.69■□□□□ 0.42
TNFRSF11A-205ENST00000616710 GBP4Q96PP9 640 aa17.68■□□□□ 0.42
TNFRSF11A-205ENST00000616710 TDRD9Q8NDG6 1382 aaKnown RBP17.68■□□□□ 0.42
TNFRSF11A-205ENST00000616710 ROCK2O75116 1388 aaKnown RBP17.68■□□□□ 0.42
TNFRSF11A-205ENST00000616710 NASPP49321 788 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF11A-205ENST00000616710 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
TNFRSF11A-205ENST00000616710 BRD4O60885 1362 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF11A-205ENST00000616710 XPCQ01831 940 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF11A-205ENST00000616710 DDX11L8A8MPP1 907 aa17.66■□□□□ 0.42
TNFRSF11A-205ENST00000616710 TPM2P07951 284 aa17.66■□□□□ 0.42
TNFRSF11A-205ENST00000616710 FOXD4L6Q3SYB3 417 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF11A-205ENST00000616710 FOXD4L3Q6VB84 417 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF11A-205ENST00000616710 C22orf23Q9BZE7 217 aa17.66■□□□□ 0.42
TNFRSF11A-205ENST00000616710 CFDP1Q9UEE9 299 aaPredicted RBP17.64■□□□□ 0.41
TNFRSF11A-205ENST00000616710 RNF214Q8ND24 703 aa17.63■□□□□ 0.41
TNFRSF11A-205ENST00000616710 MAPK8IP3Q9UPT6 1336 aa17.63■□□□□ 0.41
TNFRSF11A-205ENST00000616710 CENPJQ9HC77 1338 aaPredicted RBP17.63■□□□□ 0.41
TNFRSF11A-205ENST00000616710 UQCRHLA0A096LP55 91 aa17.62■□□□□ 0.41
TNFRSF11A-205ENST00000616710 UQCRHP07919 91 aa17.62■□□□□ 0.41
TNFRSF11A-205ENST00000616710 CDK11BP21127 795 aaKnown RBP17.62■□□□□ 0.41
TNFRSF11A-205ENST00000616710 PDZRN3Q9UPQ7 1066 aa17.62■□□□□ 0.41
TNFRSF11A-205ENST00000616710 CFTRP13569 1480 aa17.62■□□□□ 0.41
TNFRSF11A-205ENST00000616710 ERBB4Q15303 1308 aa17.62■□□□□ 0.41
TNFRSF11A-205ENST00000616710 DHX29Q7Z478 1369 aaKnown RBP17.62■□□□□ 0.41
TNFRSF11A-205ENST00000616710 ERICH3Q5RHP9 1530 aa17.61■□□□□ 0.41
TNFRSF11A-205ENST00000616710 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
TNFRSF11A-205ENST00000616710 NBPF1Q3BBV0 1214 aa17.6■□□□□ 0.41
TNFRSF11A-205ENST00000616710 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF11A-205ENST00000616710 NCOA2Q15596 1464 aa17.59■□□□□ 0.41
TNFRSF11A-205ENST00000616710 IGSF3O75054 1194 aa17.59■□□□□ 0.41
TNFRSF11A-205ENST00000616710 CALD1Q05682 793 aaKnown RBP17.59■□□□□ 0.41
TNFRSF11A-205ENST00000616710 RWDD1Q9H446 243 aaPredicted RBP17.58■□□□□ 0.4
TNFRSF11A-205ENST00000616710 CAVIN1Q6NZI2 390 aaKnown RBP17.58■□□□□ 0.4
TNFRSF11A-205ENST00000616710 TMF1P82094 1093 aa17.57■□□□□ 0.4
TNFRSF11A-205ENST00000616710 ITPRIPQ8IWB1 547 aa17.57■□□□□ 0.4
TNFRSF11A-205ENST00000616710 DUSP27Q5VZP5 1158 aa17.56■□□□□ 0.4
TNFRSF11A-205ENST00000616710 CBX1P83916 185 aa17.56■□□□□ 0.4
TNFRSF11A-205ENST00000616710 MCTP1Q6DN14 999 aa17.55■□□□□ 0.4
TNFRSF11A-205ENST00000616710 MYOM3Q5VTT5 1437 aa17.55■□□□□ 0.4
TNFRSF11A-205ENST00000616710 KDM2BQ8NHM5 1336 aa17.55■□□□□ 0.4
TNFRSF11A-205ENST00000616710 NUP155O75694 1391 aa17.55■□□□□ 0.4
TNFRSF11A-205ENST00000616710 APBB1O00213 710 aa17.55■□□□□ 0.4
TNFRSF11A-205ENST00000616710 PMFBP1Q8TBY8 1022 aa17.55■□□□□ 0.4
TNFRSF11A-205ENST00000616710 FAM177BA6PVY3 158 aa17.54■□□□□ 0.4
TNFRSF11A-205ENST00000616710 TSPY4P0CV99 314 aa17.54■□□□□ 0.4
TNFRSF11A-205ENST00000616710 TSPY10P0CW01 314 aa17.54■□□□□ 0.4
TNFRSF11A-205ENST00000616710 ZSCAN30Q86W11 494 aa17.54■□□□□ 0.4
TNFRSF11A-205ENST00000616710 CGNL1Q0VF96 1302 aa17.54■□□□□ 0.4
TNFRSF11A-205ENST00000616710 BICRAQ9NZM4 1560 aa17.53■□□□□ 0.4
TNFRSF11A-205ENST00000616710 NOL8Q76FK4 1167 aaKnown RBP17.53■□□□□ 0.4
TNFRSF11A-205ENST00000616710 BBXQ8WY36 941 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF11A-205ENST00000616710 GAS2L3Q86XJ1 694 aa17.53■□□□□ 0.4
TNFRSF11A-205ENST00000616710 TNNQ9UQP3 1299 aa17.53■□□□□ 0.4
TNFRSF11A-205ENST00000616710 UNC13AQ9UPW8 1703 aa17.53■□□□□ 0.4
TNFRSF11A-205ENST00000616710 LNPKQ9C0E8 428 aa17.53■□□□□ 0.4
TNFRSF11A-205ENST00000616710 PDE4CQ08493 712 aa17.52■□□□□ 0.4
TNFRSF11A-205ENST00000616710 TNPO1Q92973 898 aaKnown RBP17.52■□□□□ 0.4
TNFRSF11A-205ENST00000616710 SPINK5Q9NQ38 1064 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF11A-205ENST00000616710 TSC1Q92574 1164 aa17.5■□□□□ 0.39
TNFRSF11A-205ENST00000616710 PEG3Q9GZU2 1588 aa17.5■□□□□ 0.39
TNFRSF11A-205ENST00000616710 TBC1D32Q96NH3 1257 aa17.5■□□□□ 0.39
TNFRSF11A-205ENST00000616710 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
TNFRSF11A-205ENST00000616710 ANKRD30BQ9BXX2 1392 aa17.49■□□□□ 0.39
TNFRSF11A-205ENST00000616710 RAD54L2Q9Y4B4 1467 aa17.48■□□□□ 0.39
TNFRSF11A-205ENST00000616710 CCDC173Q0VFZ6 552 aa17.48■□□□□ 0.39
TNFRSF11A-205ENST00000616710 PCF11O94913 1555 aaKnown RBP17.47■□□□□ 0.39
TNFRSF11A-205ENST00000616710 NCAPD3P42695 1498 aa17.47■□□□□ 0.39
TNFRSF11A-205ENST00000616710 PTPN23Q9H3S7 1636 aa17.47■□□□□ 0.39
TNFRSF11A-205ENST00000616710 SPDYE4A6NLX3 237 aa17.46■□□□□ 0.39
TNFRSF11A-205ENST00000616710 SSFA2P28290 1259 aa17.46■□□□□ 0.39
TNFRSF11A-205ENST00000616710 E9PSI1 815 aa17.45■□□□□ 0.38
TNFRSF11A-205ENST00000616710 SMC4Q9NTJ3 1288 aa17.45■□□□□ 0.38
TNFRSF11A-205ENST00000616710 PCDHB15Q9Y5E8 787 aa17.45■□□□□ 0.38
TNFRSF11A-205ENST00000616710 PPP2R1AP30153 589 aa17.45■□□□□ 0.38
TNFRSF11A-205ENST00000616710 ZNF771Q7L3S4 317 aaPredicted RBP17.45■□□□□ 0.38
TNFRSF11A-205ENST00000616710 PLCD3Q8N3E9 789 aa17.45■□□□□ 0.38
TNFRSF11A-205ENST00000616710 VGLL3A8MV65 326 aa17.45■□□□□ 0.38
TNFRSF11A-205ENST00000616710 SLFN5Q08AF3 891 aa17.44■□□□□ 0.38
TNFRSF11A-205ENST00000616710 AAMPQ13685 434 aa17.44■□□□□ 0.38
TNFRSF11A-205ENST00000616710 SKOR2Q2VWA4 1001 aaPredicted RBP17.44■□□□□ 0.38
TNFRSF11A-205ENST00000616710 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
TNFRSF11A-205ENST00000616710 CHGAP10645 457 aaKnown RBP17.44■□□□□ 0.38
TNFRSF11A-205ENST00000616710 FSD2A1L4K1 749 aa17.44■□□□□ 0.38
TNFRSF11A-205ENST00000616710 PRPF40AO75400 957 aaKnown RBP17.43■□□□□ 0.38
TNFRSF11A-205ENST00000616710 USP19O94966 1318 aa17.43■□□□□ 0.38
TNFRSF11A-205ENST00000616710 CUX1P39880 1505 aa17.43■□□□□ 0.38
TNFRSF11A-205ENST00000616710 U2SURPO15042 1029 aaKnown RBP17.43■□□□□ 0.38
TNFRSF11A-205ENST00000616710 KIAA2012Q0VF49 1180 aa17.42■□□□□ 0.38
TNFRSF11A-205ENST00000616710 ANTXR1Q9H6X2 564 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms