RNA–Protein interactions for RNA: ENST00000615041.1

FAM49B-229, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-229ENST00000615041 ARSIQ5FYB1 569 aa13.76□□□□□ -0.21
FAM49B-229ENST00000615041 KHSRPQ92945 711 aaKnown RBP eCLIP13.76□□□□□ -0.216e-7■□□□□ 9.7
FAM49B-229ENST00000615041 NUDT7P0C024 238 aa13.75□□□□□ -0.21
FAM49B-229ENST00000615041 FBXW7Q969H0 707 aa13.75□□□□□ -0.21
FAM49B-229ENST00000615041 TSR1Q2NL82 804 aaKnown RBP13.74□□□□□ -0.21
FAM49B-229ENST00000615041 KDM4CQ9H3R0 1056 aa13.74□□□□□ -0.21
FAM49B-229ENST00000615041 FOSBP53539 338 aa13.73□□□□□ -0.21
FAM49B-229ENST00000615041 ZSWIM6Q9HCJ5 1215 aa13.73□□□□□ -0.21
FAM49B-229ENST00000615041 NPDC1Q9NQX5 325 aaPredicted RBP13.73□□□□□ -0.21
FAM49B-229ENST00000615041 GPR153Q6NV75 609 aa13.71□□□□□ -0.21
FAM49B-229ENST00000615041 ZNF710Q8N1W2 664 aa13.71□□□□□ -0.21
FAM49B-229ENST00000615041 ZNF454Q8N9F8 522 aa13.71□□□□□ -0.21
FAM49B-229ENST00000615041 AMHR2Q16671 573 aa13.68□□□□□ -0.22
FAM49B-229ENST00000615041 ZDHHC16Q969W1 377 aa13.68□□□□□ -0.22
FAM49B-229ENST00000615041 C6orf132Q5T0Z8 1188 aa13.65□□□□□ -0.22
FAM49B-229ENST00000615041 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
FAM49B-229ENST00000615041 DAXXQ9UER7 740 aaPredicted RBP13.64□□□□□ -0.23
FAM49B-229ENST00000615041 PARP9Q8IXQ6 854 aa13.63□□□□□ -0.23
FAM49B-229ENST00000615041 ADAM33Q9BZ11 813 aa13.63□□□□□ -0.23
FAM49B-229ENST00000615041 LHX6Q9UPM6 363 aa13.63□□□□□ -0.23
FAM49B-229ENST00000615041 SNPHO15079 494 aa13.61□□□□□ -0.23
FAM49B-229ENST00000615041 TTLL12Q14166 644 aaPredicted RBP13.61□□□□□ -0.23
FAM49B-229ENST00000615041 CERKQ8TCT0 537 aa13.61□□□□□ -0.23
FAM49B-229ENST00000615041 PADI6Q6TGC4 694 aa13.58□□□□□ -0.24
FAM49B-229ENST00000615041 FAM117AQ9C073 453 aa13.58□□□□□ -0.24
FAM49B-229ENST00000615041 TIMELESSQ9UNS1 1208 aa13.58□□□□□ -0.24
FAM49B-229ENST00000615041 PPP4R3BQ5MIZ7 849 aa13.57□□□□□ -0.24
FAM49B-229ENST00000615041 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
FAM49B-229ENST00000615041 HOXB1P14653 301 aaPredicted RBP13.54□□□□□ -0.24
FAM49B-229ENST00000615041 FAM161AQ3B820 660 aa13.54□□□□□ -0.24
FAM49B-229ENST00000615041 GIGYF2Q6Y7W6 1299 aaKnown RBP13.53□□□□□ -0.24
FAM49B-229ENST00000615041 DDRGK1Q96HY6 314 aa13.53□□□□□ -0.24
FAM49B-229ENST00000615041 PHOX2BQ99453 314 aa13.53□□□□□ -0.24
FAM49B-229ENST00000615041 RBM27Q9P2N5 1060 aaKnown RBP13.53□□□□□ -0.24
FAM49B-229ENST00000615041 PRSS12P56730 875 aa13.51□□□□□ -0.25
FAM49B-229ENST00000615041 LCE2DQ5TA82 110 aaPredicted RBP13.51□□□□□ -0.25
FAM49B-229ENST00000615041 TTC13Q8NBP0 860 aa13.51□□□□□ -0.25
FAM49B-229ENST00000615041 REPIN1Q9BWE0 567 aaKnown RBP13.51□□□□□ -0.25
FAM49B-229ENST00000615041 BCL2L12Q9HB09 334 aa13.51□□□□□ -0.25
FAM49B-229ENST00000615041 PLEKHG3A1L390 1219 aa13.5□□□□□ -0.25
FAM49B-229ENST00000615041 OATP04181 439 aa13.5□□□□□ -0.25
FAM49B-229ENST00000615041 CLCN1P35523 988 aa13.5□□□□□ -0.25
FAM49B-229ENST00000615041 MDM2Q00987 491 aaPredicted RBP13.5□□□□□ -0.25
FAM49B-229ENST00000615041 ERICH6Q7L0X2 663 aa13.5□□□□□ -0.25
FAM49B-229ENST00000615041 CDCA7LQ96GN5 454 aa13.5□□□□□ -0.25
FAM49B-229ENST00000615041 ADGRG1Q9Y653 693 aa13.5□□□□□ -0.25
FAM49B-229ENST00000615041 METTL3Q86U44 580 aaKnown RBP13.49□□□□□ -0.25
FAM49B-229ENST00000615041 COL9A1P20849 921 aa13.48□□□□□ -0.25
FAM49B-229ENST00000615041 TMUB1Q9BVT8 246 aa13.48□□□□□ -0.25
FAM49B-229ENST00000615041 GPCPD1Q9NPB8 672 aa13.48□□□□□ -0.25
FAM49B-229ENST00000615041 MS4A1P11836 297 aa13.47□□□□□ -0.25
FAM49B-229ENST00000615041 PTPREP23469 700 aa13.47□□□□□ -0.25
FAM49B-229ENST00000615041 PXYLP1Q8TE99 480 aa13.47□□□□□ -0.25
FAM49B-229ENST00000615041 C14orf37Q86TY3 774 aa13.45□□□□□ -0.26
FAM49B-229ENST00000615041 PPP1R3GB7ZBB8 358 aa13.44□□□□□ -0.26
FAM49B-229ENST00000615041 NLRP7Q8WX94 980 aa13.44□□□□□ -0.26
FAM49B-229ENST00000615041 FAM163AQ96GL9 167 aaPredicted RBP13.44□□□□□ -0.26
FAM49B-229ENST00000615041 RBM46Q8TBY0 533 aaKnown RBP13.43□□□□□ -0.26
FAM49B-229ENST00000615041 FAM198AQ9UFP1 575 aa13.43□□□□□ -0.26
FAM49B-229ENST00000615041 SSTR3P32745 418 aaPredicted RBP13.41□□□□□ -0.26
FAM49B-229ENST00000615041 TSKSQ9UJT2 592 aa13.4□□□□□ -0.26
FAM49B-229ENST00000615041 KCNK17Q96T54 332 aa13.38□□□□□ -0.27
FAM49B-229ENST00000615041 FAM217BQ9NTX9 383 aaPredicted RBP13.38□□□□□ -0.27
FAM49B-229ENST00000615041 TRIM6-TRIM34B2RNG4 842 aa13.36□□□□□ -0.27
FAM49B-229ENST00000615041 NUDT18Q6ZVK8 323 aa13.35□□□□□ -0.27
FAM49B-229ENST00000615041 KCNH8Q96L42 1107 aa13.35□□□□□ -0.27
FAM49B-229ENST00000615041 EYA1Q99502 592 aa13.35□□□□□ -0.27
FAM49B-229ENST00000615041 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.34□□□□□ -0.27
FAM49B-229ENST00000615041 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
FAM49B-229ENST00000615041 GOPCQ9HD26 462 aa13.34□□□□□ -0.27
FAM49B-229ENST00000615041 RCCD1A6NED2 376 aa13.33□□□□□ -0.28
FAM49B-229ENST00000615041 C3orf80F5H4A9 247 aa13.33□□□□□ -0.28
FAM49B-229ENST00000615041 PROX2Q3B8N5 592 aa13.33□□□□□ -0.28
FAM49B-229ENST00000615041 PACS2Q86VP3 889 aa13.33□□□□□ -0.28
FAM49B-229ENST00000615041 BEGAINQ9BUH8 593 aa13.33□□□□□ -0.28
FAM49B-229ENST00000615041 PNMA3Q9UL41 463 aa13.33□□□□□ -0.28
FAM49B-229ENST00000615041 ERBB3P21860 1342 aa13.33□□□□□ -0.28
FAM49B-229ENST00000615041 TATDN2Q93075 761 aa13.32□□□□□ -0.28
FAM49B-229ENST00000615041 VARS2Q5ST30 1063 aaKnown RBP13.3□□□□□ -0.28
FAM49B-229ENST00000615041 ST18O60284 1047 aa13.29□□□□□ -0.28
FAM49B-229ENST00000615041 ONECUT3O60422 494 aaPredicted RBP13.29□□□□□ -0.28
FAM49B-229ENST00000615041 PSEN2P49810 448 aa13.29□□□□□ -0.28
FAM49B-229ENST00000615041 SH3D19Q5HYK7 790 aa13.29□□□□□ -0.28
FAM49B-229ENST00000615041 PCMTD1Q96MG8 357 aaPredicted RBP13.29□□□□□ -0.28
FAM49B-229ENST00000615041 DNAJB2P25686 324 aa13.28□□□□□ -0.28
FAM49B-229ENST00000615041 RSPH6AQ9H0K4 717 aa13.28□□□□□ -0.28
FAM49B-229ENST00000615041 SMAPO00193 183 aa13.27□□□□□ -0.29
FAM49B-229ENST00000615041 ZBED2Q9BTP6 218 aa13.27□□□□□ -0.29
FAM49B-229ENST00000615041 EMP3P54852 163 aa13.26□□□□□ -0.29
FAM49B-229ENST00000615041 ARHGAP33O14559 1287 aa13.25□□□□□ -0.29
FAM49B-229ENST00000615041 KIAA1468Q9P260 1216 aa13.25□□□□□ -0.29
FAM49B-229ENST00000615041 SKIV2LQ15477 1246 aaKnown RBP13.23□□□□□ -0.29
FAM49B-229ENST00000615041 POTEEQ6S8J3 1075 aa13.23□□□□□ -0.29
FAM49B-229ENST00000615041 CDAN1Q8IWY9 1227 aa13.23□□□□□ -0.29
FAM49B-229ENST00000615041 MARVELD3Q96A59 401 aa13.23□□□□□ -0.29
FAM49B-229ENST00000615041 TMEM134Q9H6X4 195 aa13.23□□□□□ -0.29
FAM49B-229ENST00000615041 AXIN2Q9Y2T1 843 aa13.22□□□□□ -0.29
FAM49B-229ENST00000615041 SULF1Q8IWU6 871 aa13.21□□□□□ -0.29
FAM49B-229ENST00000615041 DDX11L8A8MPP1 907 aa13.2□□□□□ -0.3
FAM49B-229ENST00000615041 CD46P15529 392 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms