RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 TRAK1Q9UPV9 953 aa19.28■□□□□ 0.68
TNXB-209ENST00000613214 MTMR7Q9Y216 660 aa19.28■□□□□ 0.68
TNXB-209ENST00000613214 EID1Q9Y6B2 187 aa19.27■□□□□ 0.68
TNXB-209ENST00000613214 RCAN3Q9UKA8 241 aa19.27■□□□□ 0.68
TNXB-209ENST00000613214 DHX16O60231 1041 aaKnown RBP19.27■□□□□ 0.67
TNXB-209ENST00000613214 HNRNPMP52272 730 aaKnown RBP eCLIP19.26■□□□□ 0.67
TNXB-209ENST00000613214 TCERG1O14776 1098 aaKnown RBP19.26■□□□□ 0.67
TNXB-209ENST00000613214 TNNT3P45378 269 aaPredicted RBP19.26■□□□□ 0.67
TNXB-209ENST00000613214 RWDD1Q9H446 243 aaPredicted RBP19.26■□□□□ 0.67
TNXB-209ENST00000613214 MCTP1Q6DN14 999 aa19.25■□□□□ 0.67
TNXB-209ENST00000613214 ZNF428Q96B54 188 aa19.25■□□□□ 0.67
TNXB-209ENST00000613214 H3BQV1 296 aa19.25■□□□□ 0.67
TNXB-209ENST00000613214 IFFO2Q5TF58 517 aa19.25■□□□□ 0.67
TNXB-209ENST00000613214 FYB1O15117 783 aa19.25■□□□□ 0.67
TNXB-209ENST00000613214 HTATSF1O43719 755 aaKnown RBP19.24■□□□□ 0.67
TNXB-209ENST00000613214 GOLGA6L1Q8N7Z2 621 aa19.24■□□□□ 0.67
TNXB-209ENST00000613214 PPP1R1BQ9UD71 204 aaPredicted RBP19.24■□□□□ 0.67
TNXB-209ENST00000613214 BAZ1BQ9UIG0 1483 aaKnown RBP19.23■□□□□ 0.67
TNXB-209ENST00000613214 KIF27Q86VH2 1401 aa19.23■□□□□ 0.67
TNXB-209ENST00000613214 PCMTD1Q96MG8 357 aaPredicted RBP19.22■□□□□ 0.67
TNXB-209ENST00000613214 APPP05067 770 aa19.22■□□□□ 0.67
TNXB-209ENST00000613214 SLC4A3P48751 1232 aa19.21■□□□□ 0.67
TNXB-209ENST00000613214 KIF16BQ96L93 1317 aa19.2■□□□□ 0.66
TNXB-209ENST00000613214 TPM3P06753 285 aa19.2■□□□□ 0.66
TNXB-209ENST00000613214 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
TNXB-209ENST00000613214 CALD1Q05682 793 aaKnown RBP19.19■□□□□ 0.66
TNXB-209ENST00000613214 RBM19Q9Y4C8 960 aaKnown RBP19.19■□□□□ 0.66
TNXB-209ENST00000613214 C1orf141Q5JVX7 400 aa19.19■□□□□ 0.66
TNXB-209ENST00000613214 WASHC2CQ9Y4E1 1318 aa19.18■□□□□ 0.66
TNXB-209ENST00000613214 AKAP17AQ02040 695 aaKnown RBP19.18■□□□□ 0.66
TNXB-209ENST00000613214 VPS37DQ86XT2 251 aa19.18■□□□□ 0.66
TNXB-209ENST00000613214 FAM184AQ8NB25 1140 aa19.17■□□□□ 0.66
TNXB-209ENST00000613214 FAM177BA6PVY3 158 aa19.17■□□□□ 0.66
TNXB-209ENST00000613214 SYAP1Q96A49 352 aaPredicted RBP19.17■□□□□ 0.66
TNXB-209ENST00000613214 PLIN1O60240 522 aa19.17■□□□□ 0.66
TNXB-209ENST00000613214 ZNF592Q92610 1267 aa19.16■□□□□ 0.66
TNXB-209ENST00000613214 NUTM2GQ5VZR2 741 aa19.15■□□□□ 0.66
TNXB-209ENST00000613214 NUP155O75694 1391 aa19.15■□□□□ 0.66
TNXB-209ENST00000613214 ANKRD45Q5TZF3 282 aa19.15■□□□□ 0.66
TNXB-209ENST00000613214 HMMRO75330 724 aa19.14■□□□□ 0.65
TNXB-209ENST00000613214 NOL10Q9BSC4 688 aaKnown RBP19.14■□□□□ 0.65
TNXB-209ENST00000613214 GOLGA6L3A6NEY3 463 aa19.12■□□□□ 0.65
TNXB-209ENST00000613214 PMFBP1Q8TBY8 1022 aa19.12■□□□□ 0.65
TNXB-209ENST00000613214 CCDC34Q96HJ3 373 aa19.12■□□□□ 0.65
TNXB-209ENST00000613214 TERF2IPQ9NYB0 399 aa19.12■□□□□ 0.65
TNXB-209ENST00000613214 USP35Q9P2H5 1018 aa19.1■□□□□ 0.65
TNXB-209ENST00000613214 CFAP44Q96MT7 982 aa19.1■□□□□ 0.65
TNXB-209ENST00000613214 TTC5Q8N0Z6 440 aa19.09■□□□□ 0.65
TNXB-209ENST00000613214 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.09■□□□□ 0.65
TNXB-209ENST00000613214 MINK1Q8N4C8 1332 aaPredicted RBP19.09■□□□□ 0.65
TNXB-209ENST00000613214 CUX2O14529 1486 aa19.08■□□□□ 0.65
TNXB-209ENST00000613214 CENPJQ9HC77 1338 aaPredicted RBP19.08■□□□□ 0.65
TNXB-209ENST00000613214 TSR1Q2NL82 804 aaKnown RBP19.08■□□□□ 0.65
TNXB-209ENST00000613214 MPHOSPH9Q99550 1183 aa19.08■□□□□ 0.65
TNXB-209ENST00000613214 EEA1Q15075 1411 aa19.07■□□□□ 0.64
TNXB-209ENST00000613214 CCDC27Q2M243 656 aa19.07■□□□□ 0.64
TNXB-209ENST00000613214 SYNE3Q6ZMZ3 975 aa19.07■□□□□ 0.64
TNXB-209ENST00000613214 C9orf78Q9NZ63 289 aaPredicted RBP19.06■□□□□ 0.64
TNXB-209ENST00000613214 DCAF8L1A6NGE4 600 aa19.06■□□□□ 0.64
TNXB-209ENST00000613214 AIMP1Q12904 312 aaKnown RBP19.06■□□□□ 0.64
TNXB-209ENST00000613214 AMOTL1Q8IY63 956 aa19.06■□□□□ 0.64
TNXB-209ENST00000613214 NFXL1Q6ZNB6 911 aa19.06■□□□□ 0.64
TNXB-209ENST00000613214 ANO2Q9NQ90 1003 aa19.06■□□□□ 0.64
TNXB-209ENST00000613214 KANK4Q5T7N3 995 aaPredicted RBP19.06■□□□□ 0.64
TNXB-209ENST00000613214 TEFQ10587 303 aa19.05■□□□□ 0.64
TNXB-209ENST00000613214 STK11IPQ8N1F8 1099 aa19.05■□□□□ 0.64
TNXB-209ENST00000613214 CCDC43Q96MW1 224 aaKnown RBP19.05■□□□□ 0.64
TNXB-209ENST00000613214 CSPP1Q1MSJ5 1256 aa19.04■□□□□ 0.64
TNXB-209ENST00000613214 CYB5RLQ6IPT4 315 aa19.04■□□□□ 0.64
TNXB-209ENST00000613214 ST18O60284 1047 aa19.04■□□□□ 0.64
TNXB-209ENST00000613214 IBSPP21815 317 aaPredicted RBP19.04■□□□□ 0.64
TNXB-209ENST00000613214 PSME1Q06323 249 aa19.03■□□□□ 0.64
TNXB-209ENST00000613214 SKIDA1Q1XH10 827 aa19.03■□□□□ 0.64
TNXB-209ENST00000613214 TPM2P07951 284 aa19.03■□□□□ 0.64
TNXB-209ENST00000613214 GOLGA6L19H0YKK7 550 aa19.03■□□□□ 0.64
TNXB-209ENST00000613214 CARMIL1Q5VZK9 1371 aa19.03■□□□□ 0.64
TNXB-209ENST00000613214 CEP164Q9UPV0 1460 aa19.02■□□□□ 0.64
TNXB-209ENST00000613214 NAP1L1P55209 391 aaKnown RBP19.02■□□□□ 0.63
TNXB-209ENST00000613214 ARHGAP35Q9NRY4 1499 aa19.02■□□□□ 0.63
TNXB-209ENST00000613214 RBM33Q96EV2 1170 aaKnown RBP19.01■□□□□ 0.63
TNXB-209ENST00000613214 COG3Q96JB2 828 aa19.01■□□□□ 0.63
TNXB-209ENST00000613214 CCDC180Q9P1Z9 1646 aa19.01■□□□□ 0.63
TNXB-209ENST00000613214 BECN2A8MW95 431 aa19.01■□□□□ 0.63
TNXB-209ENST00000613214 IKQ13123 557 aaPredicted RBP19.01■□□□□ 0.63
TNXB-209ENST00000613214 ZFYVE27Q5T4F4 411 aa19■□□□□ 0.63
TNXB-209ENST00000613214 DIAPH3Q9NSV4 1193 aa19■□□□□ 0.63
TNXB-209ENST00000613214 TRIM29Q14134 588 aa19■□□□□ 0.63
TNXB-209ENST00000613214 RB1CC1Q8TDY2 1594 aa18.99■□□□□ 0.63
TNXB-209ENST00000613214 EFCAB2Q5VUJ9 269 aa18.99■□□□□ 0.63
TNXB-209ENST00000613214 EIF3AQ14152 1382 aaKnown RBP18.98■□□□□ 0.63
TNXB-209ENST00000613214 PTMSP20962 102 aa18.98■□□□□ 0.63
TNXB-209ENST00000613214 SETD5Q9C0A6 1442 aa18.98■□□□□ 0.63
TNXB-209ENST00000613214 TMEM132AQ24JP5 1023 aa18.97■□□□□ 0.63
TNXB-209ENST00000613214 CHMP4CQ96CF2 233 aa18.97■□□□□ 0.63
TNXB-209ENST00000613214 PANK3Q9H999 370 aa18.97■□□□□ 0.63
TNXB-209ENST00000613214 NEUROD6Q96NK8 337 aa18.96■□□□□ 0.63
TNXB-209ENST00000613214 TTLL5Q6EMB2 1281 aa18.96■□□□□ 0.63
TNXB-209ENST00000613214 IFIT2P09913 472 aaKnown RBP18.95■□□□□ 0.62
TNXB-209ENST00000613214 NEXNQ0ZGT2 675 aa18.95■□□□□ 0.62
TNXB-209ENST00000613214 RALBP1Q15311 655 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms