RNA–Protein interactions for RNA: ENST00000612761.1

CFDP1-211, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 395 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-211ENST00000612761 SLC24A1O60721 1099 aa10.84□□□□□ -0.67
CFDP1-211ENST00000612761 EN1Q05925 392 aaPredicted RBP10.84□□□□□ -0.67
CFDP1-211ENST00000612761 MLLT3P42568 568 aaPredicted RBP10.83□□□□□ -0.68
CFDP1-211ENST00000612761 C6orf132Q5T0Z8 1188 aa10.83□□□□□ -0.68
CFDP1-211ENST00000612761 DMRTA1Q5VZB9 504 aa10.83□□□□□ -0.68
CFDP1-211ENST00000612761 MAP3K7O43318 606 aa10.82□□□□□ -0.68
CFDP1-211ENST00000612761 OSBPP22059 807 aa10.82□□□□□ -0.68
CFDP1-211ENST00000612761 PPP1R3GB7ZBB8 358 aa10.81□□□□□ -0.68
CFDP1-211ENST00000612761 TK2O00142 265 aa10.8□□□□□ -0.68
CFDP1-211ENST00000612761 ADGRD1Q6QNK2 874 aa10.79□□□□□ -0.68
CFDP1-211ENST00000612761 SPNS2Q8IVW8 549 aa10.79□□□□□ -0.68
CFDP1-211ENST00000612761 TESPA1A2RU30 521 aaPredicted RBP10.78□□□□□ -0.68
CFDP1-211ENST00000612761 PRIM1P49642 420 aaKnown RBP10.78□□□□□ -0.68
CFDP1-211ENST00000612761 SMYD5Q6GMV2 418 aa10.78□□□□□ -0.68
CFDP1-211ENST00000612761 COL9A1P20849 921 aa10.77□□□□□ -0.69
CFDP1-211ENST00000612761 TSR1Q2NL82 804 aaKnown RBP10.77□□□□□ -0.69
CFDP1-211ENST00000612761 SLC4A5Q9BY07 1137 aa10.77□□□□□ -0.69
CFDP1-211ENST00000612761 ZBED2Q9BTP6 218 aa10.76□□□□□ -0.69
CFDP1-211ENST00000612761 VPS9D1Q9Y2B5 631 aa10.76□□□□□ -0.69
CFDP1-211ENST00000612761 PLSCR2Q9NRY7 297 aa10.75□□□□□ -0.69
CFDP1-211ENST00000612761 CERKQ8TCT0 537 aa10.73□□□□□ -0.69
CFDP1-211ENST00000612761 HRO43593 1189 aa10.71□□□□□ -0.69
CFDP1-211ENST00000612761 STAC3Q96MF2 364 aa10.71□□□□□ -0.69
CFDP1-211ENST00000612761 CDHR5Q9HBB8 845 aa10.71□□□□□ -0.69
CFDP1-211ENST00000612761 MMRN1Q13201 1228 aa10.7□□□□□ -0.7
CFDP1-211ENST00000612761 PROX2Q3B8N5 592 aa10.7□□□□□ -0.7
CFDP1-211ENST00000612761 MYT1LQ9UL68 1186 aa10.7□□□□□ -0.7
CFDP1-211ENST00000612761 NUTM2FA1L443 756 aa10.69□□□□□ -0.7
CFDP1-211ENST00000612761 TULP1O00294 542 aaPredicted RBP10.69□□□□□ -0.7
CFDP1-211ENST00000612761 ONECUT3O60422 494 aaPredicted RBP10.68□□□□□ -0.7
CFDP1-211ENST00000612761 RABGEF1Q9UJ41 708 aa10.68□□□□□ -0.7
CFDP1-211ENST00000612761 TRIM6-TRIM34B2RNG4 842 aa10.67□□□□□ -0.7
CFDP1-211ENST00000612761 PRSS12P56730 875 aa10.67□□□□□ -0.7
CFDP1-211ENST00000612761 RBM26Q5T8P6 1007 aaKnown RBP10.67□□□□□ -0.7
CFDP1-211ENST00000612761 NBPF3Q9H094 633 aa10.67□□□□□ -0.7
CFDP1-211ENST00000612761 BHMG1C9JSJ3 638 aaPredicted RBP10.66□□□□□ -0.7
CFDP1-211ENST00000612761 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
CFDP1-211ENST00000612761 NPDC1Q9NQX5 325 aaPredicted RBP10.65□□□□□ -0.7
CFDP1-211ENST00000612761 KIAA1468Q9P260 1216 aa10.65□□□□□ -0.7
CFDP1-211ENST00000612761 PTGDRQ13258 359 aa10.64□□□□□ -0.71
CFDP1-211ENST00000612761 PACS2Q86VP3 889 aa10.64□□□□□ -0.71
CFDP1-211ENST00000612761 MRPL50Q8N5N7 158 aaKnown RBP10.64□□□□□ -0.71
CFDP1-211ENST00000612761 RBM27Q9P2N5 1060 aaKnown RBP10.64□□□□□ -0.71
CFDP1-211ENST00000612761 RNF166Q96A37 237 aaPredicted RBP10.63□□□□□ -0.71
CFDP1-211ENST00000612761 TSKSQ9UJT2 592 aa10.63□□□□□ -0.71
CFDP1-211ENST00000612761 FCHSD2O94868 740 aa10.62□□□□□ -0.71
CFDP1-211ENST00000612761 GOLGA8CPA6NN73 597 aa10.6□□□□□ -0.71
CFDP1-211ENST00000612761 PADI6Q6TGC4 694 aa10.59□□□□□ -0.71
CFDP1-211ENST00000612761 LAPTM4BQ86VI4 370 aa10.59□□□□□ -0.71
CFDP1-211ENST00000612761 GPIHBP1Q8IV16 184 aa10.58□□□□□ -0.72
CFDP1-211ENST00000612761 FAM198AQ9UFP1 575 aa10.58□□□□□ -0.72
CFDP1-211ENST00000612761 NBPF26B4DH59 902 aa10.57□□□□□ -0.72
CFDP1-211ENST00000612761 TTC13Q8NBP0 860 aa10.57□□□□□ -0.72
CFDP1-211ENST00000612761 SEPT9Q9UHD8 586 aaPredicted RBP10.57□□□□□ -0.72
CFDP1-211ENST00000612761 HIC1Q14526 733 aa10.56□□□□□ -0.72
CFDP1-211ENST00000612761 TATDN2Q93075 761 aa10.56□□□□□ -0.72
CFDP1-211ENST00000612761 FAM98CQ17RN3 349 aaKnown RBP10.55□□□□□ -0.72
CFDP1-211ENST00000612761 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.55□□□□□ -0.72
CFDP1-211ENST00000612761 KCTD12Q96CX2 325 aaKnown RBP10.55□□□□□ -0.72
CFDP1-211ENST00000612761 PNMA3Q9UL41 463 aa10.55□□□□□ -0.72
CFDP1-211ENST00000612761 WNT2BQ93097 391 aa10.54□□□□□ -0.72
CFDP1-211ENST00000612761 GPR37O15354 613 aa10.53□□□□□ -0.72
CFDP1-211ENST00000612761 NUDT18Q6ZVK8 323 aa10.53□□□□□ -0.72
CFDP1-211ENST00000612761 ZFRQ96KR1 1074 aaKnown RBP10.53□□□□□ -0.72
CFDP1-211ENST00000612761 SMAPO00193 183 aa10.52□□□□□ -0.73
CFDP1-211ENST00000612761 GNPATO15228 680 aa10.52□□□□□ -0.73
CFDP1-211ENST00000612761 LMOD2Q6P5Q4 547 aa10.52□□□□□ -0.73
CFDP1-211ENST00000612761 ANKK1Q8NFD2 765 aa10.52□□□□□ -0.73
CFDP1-211ENST00000612761 C3orf80F5H4A9 247 aa10.51□□□□□ -0.73
CFDP1-211ENST00000612761 BCANQ96GW7 911 aa10.51□□□□□ -0.73
CFDP1-211ENST00000612761 THSD4Q6ZMP0 1018 aa10.48□□□□□ -0.73
CFDP1-211ENST00000612761 RBM46Q8TBY0 533 aaKnown RBP10.48□□□□□ -0.73
CFDP1-211ENST00000612761 HCSTQ9UBK5 93 aa10.48□□□□□ -0.73
CFDP1-211ENST00000612761 ADGRG1Q9Y653 693 aa10.48□□□□□ -0.73
CFDP1-211ENST00000612761 FECHP22830 423 aa10.47□□□□□ -0.73
CFDP1-211ENST00000612761 EYA1Q99502 592 aa10.47□□□□□ -0.73
CFDP1-211ENST00000612761 HDGFP51858 240 aaKnown RBP10.46□□□□□ -0.73
CFDP1-211ENST00000612761 LRCH3Q96II8 777 aa10.46□□□□□ -0.73
CFDP1-211ENST00000612761 SOWAHBA6NEL2 793 aa10.45□□□□□ -0.74
CFDP1-211ENST00000612761 OATP04181 439 aa10.45□□□□□ -0.74
CFDP1-211ENST00000612761 PTPN5P54829 565 aa10.45□□□□□ -0.74
CFDP1-211ENST00000612761 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.45□□□□□ -0.74
CFDP1-211ENST00000612761 BCAMP50895 628 aa10.44□□□□□ -0.74
CFDP1-211ENST00000612761 FAM161AQ3B820 660 aa10.44□□□□□ -0.74
CFDP1-211ENST00000612761 SAMD7Q7Z3H4 446 aa10.43□□□□□ -0.74
CFDP1-211ENST00000612761 DNAJB2P25686 324 aa10.41□□□□□ -0.74
CFDP1-211ENST00000612761 MAP2K5Q13163 448 aa10.4□□□□□ -0.74
CFDP1-211ENST00000612761 METTL3Q86U44 580 aaKnown RBP10.4□□□□□ -0.74
CFDP1-211ENST00000612761 PXYLP1Q8TE99 480 aa10.4□□□□□ -0.74
CFDP1-211ENST00000612761 RCCD1A6NED2 376 aa10.39□□□□□ -0.75
CFDP1-211ENST00000612761 SLC4A3P48751 1232 aa10.39□□□□□ -0.75
CFDP1-211ENST00000612761 SWT1Q5T5J6 900 aaKnown RBP10.39□□□□□ -0.75
CFDP1-211ENST00000612761 ZC3H15Q8WU90 426 aaKnown RBP10.39□□□□□ -0.75
CFDP1-211ENST00000612761 TSR3Q9UJK0 312 aaKnown RBP10.39□□□□□ -0.75
CFDP1-211ENST00000612761 HPS5Q9UPZ3 1129 aa10.39□□□□□ -0.75
CFDP1-211ENST00000612761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.38□□□□□ -0.75
CFDP1-211ENST00000612761 MINK1Q8N4C8 1332 aaPredicted RBP10.37□□□□□ -0.75
CFDP1-211ENST00000612761 RNF40O75150 1001 aa10.37□□□□□ -0.75
CFDP1-211ENST00000612761 TMEM134Q9H6X4 195 aa10.37□□□□□ -0.75
CFDP1-211ENST00000612761 IRF6O14896 467 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms