RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 TYW1BQ6NUM6 668 aa11.67□□□□□ -0.54
TARDBP-212ENST00000611008 ITGBL1O95965 494 aaPredicted RBP11.66□□□□□ -0.54
TARDBP-212ENST00000611008 BCAMP50895 628 aa11.66□□□□□ -0.54
TARDBP-212ENST00000611008 LAPTM4BQ86VI4 370 aa11.66□□□□□ -0.54
TARDBP-212ENST00000611008 PHF14O94880 888 aa11.65□□□□□ -0.54
TARDBP-212ENST00000611008 SOWAHBA6NEL2 793 aa11.63□□□□□ -0.55
TARDBP-212ENST00000611008 NYAP1Q6ZVC0 841 aa11.63□□□□□ -0.55
TARDBP-212ENST00000611008 KIAA1468Q9P260 1216 aa11.63□□□□□ -0.55
TARDBP-212ENST00000611008 ZFRQ96KR1 1074 aaKnown RBP11.62□□□□□ -0.55
TARDBP-212ENST00000611008 ONECUT3O60422 494 aaPredicted RBP11.59□□□□□ -0.55
TARDBP-212ENST00000611008 EPAS1Q99814 870 aa11.58□□□□□ -0.56
TARDBP-212ENST00000611008 WBP1LQ9NX94 342 aa11.58□□□□□ -0.56
TARDBP-212ENST00000611008 KCNC4Q03721 635 aa11.57□□□□□ -0.56
TARDBP-212ENST00000611008 C6orf132Q5T0Z8 1188 aa11.57□□□□□ -0.56
TARDBP-212ENST00000611008 SEPT9Q9UHD8 586 aaPredicted RBP11.57□□□□□ -0.56
TARDBP-212ENST00000611008 DCAF8L2P0C7V8 631 aa11.56□□□□□ -0.56
TARDBP-212ENST00000611008 CADPS2Q86UW7 1296 aa11.55□□□□□ -0.56
TARDBP-212ENST00000611008 Q6ZNB5 142 aa11.54□□□□□ -0.56
TARDBP-212ENST00000611008 TRIM6-TRIM34B2RNG4 842 aa11.53□□□□□ -0.56
TARDBP-212ENST00000611008 FAM98CQ17RN3 349 aaKnown RBP11.53□□□□□ -0.56
TARDBP-212ENST00000611008 DPYSL4O14531 572 aa11.51□□□□□ -0.57
TARDBP-212ENST00000611008 RBM33Q96EV2 1170 aaKnown RBP11.51□□□□□ -0.57
TARDBP-212ENST00000611008 LRCH3Q96II8 777 aa11.51□□□□□ -0.57
TARDBP-212ENST00000611008 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.51□□□□□ -0.57
TARDBP-212ENST00000611008 TSR3Q9UJK0 312 aaKnown RBP11.51□□□□□ -0.57
TARDBP-212ENST00000611008 CAMK2BQ13554 666 aa11.5□□□□□ -0.57
TARDBP-212ENST00000611008 HPS5Q9UPZ3 1129 aa11.5□□□□□ -0.57
TARDBP-212ENST00000611008 DDX12PQ92771 950 aa11.47□□□□□ -0.57
TARDBP-212ENST00000611008 PACS2Q86VP3 889 aa11.45□□□□□ -0.58
TARDBP-212ENST00000611008 LAPTM4AQ15012 233 aa11.43□□□□□ -0.58
TARDBP-212ENST00000611008 MAP3K7O43318 606 aa11.41□□□□□ -0.58
TARDBP-212ENST00000611008 PPP4CP60510 307 aa11.41□□□□□ -0.58
TARDBP-212ENST00000611008 NBR1Q14596 966 aa11.41□□□□□ -0.58
TARDBP-212ENST00000611008 EN1Q05925 392 aaPredicted RBP11.4□□□□□ -0.58
TARDBP-212ENST00000611008 TSKSQ9UJT2 592 aa11.4□□□□□ -0.58
TARDBP-212ENST00000611008 TSR1Q2NL82 804 aaKnown RBP11.38□□□□□ -0.59
TARDBP-212ENST00000611008 GFRA3O60609 400 aa11.37□□□□□ -0.59
TARDBP-212ENST00000611008 PDIA6Q15084 440 aa11.34□□□□□ -0.59
TARDBP-212ENST00000611008 TJAP1Q5JTD0 557 aa11.34□□□□□ -0.59
TARDBP-212ENST00000611008 SAMD7Q7Z3H4 446 aa11.34□□□□□ -0.59
TARDBP-212ENST00000611008 CDCA7LQ96GN5 454 aa11.34□□□□□ -0.59
TARDBP-212ENST00000611008 SMAPO00193 183 aa11.33□□□□□ -0.6
TARDBP-212ENST00000611008 TRAF7Q6Q0C0 670 aa11.33□□□□□ -0.6
TARDBP-212ENST00000611008 SPDYE16A6NNV3 312 aaPredicted RBP11.32□□□□□ -0.6
TARDBP-212ENST00000611008 PRSS12P56730 875 aa11.32□□□□□ -0.6
TARDBP-212ENST00000611008 CERKQ8TCT0 537 aa11.31□□□□□ -0.6
TARDBP-212ENST00000611008 PRKD2Q9BZL6 878 aa11.31□□□□□ -0.6
TARDBP-212ENST00000611008 MTRQ99707 1265 aa11.3□□□□□ -0.6
TARDBP-212ENST00000611008 IL21Q9HBE4 155 aa11.3□□□□□ -0.6
TARDBP-212ENST00000611008 NBPF26B4DH59 902 aa11.28□□□□□ -0.6
TARDBP-212ENST00000611008 HDGFP51858 240 aaKnown RBP11.28□□□□□ -0.6
TARDBP-212ENST00000611008 LCE2BO14633 110 aa11.27□□□□□ -0.61
TARDBP-212ENST00000611008 PPP1R18Q6NYC8 613 aa11.27□□□□□ -0.61
TARDBP-212ENST00000611008 TATDN2Q93075 761 aa11.27□□□□□ -0.61
TARDBP-212ENST00000611008 FAM198AQ9UFP1 575 aa11.27□□□□□ -0.61
TARDBP-212ENST00000611008 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
TARDBP-212ENST00000611008 NRG2O14511 850 aaPredicted RBP11.26□□□□□ -0.61
TARDBP-212ENST00000611008 RNF40O75150 1001 aa11.25□□□□□ -0.61
TARDBP-212ENST00000611008 V9GY48 417 aaPredicted RBP11.25□□□□□ -0.61
TARDBP-212ENST00000611008 GRXCR2A6NFK2 248 aa11.24□□□□□ -0.61
TARDBP-212ENST00000611008 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.23□□□□□ -0.61
TARDBP-212ENST00000611008 C3orf80F5H4A9 247 aa11.22□□□□□ -0.61
TARDBP-212ENST00000611008 BBXQ8WY36 941 aaPredicted RBP11.22□□□□□ -0.61
TARDBP-212ENST00000611008 ZNF516Q92618 1163 aa11.22□□□□□ -0.61
TARDBP-212ENST00000611008 PRIM1P49642 420 aaKnown RBP11.21□□□□□ -0.61
TARDBP-212ENST00000611008 NUDT18Q6ZVK8 323 aa11.21□□□□□ -0.61
TARDBP-212ENST00000611008 E2F4Q16254 413 aa11.2□□□□□ -0.62
TARDBP-212ENST00000611008 APLP1P51693 650 aa11.19□□□□□ -0.62
TARDBP-212ENST00000611008 NECTIN2Q92692 538 aa11.19□□□□□ -0.62
TARDBP-212ENST00000611008 RBM27Q9P2N5 1060 aaKnown RBP11.18□□□□□ -0.62
TARDBP-212ENST00000611008 GGCXP38435 758 aa11.17□□□□□ -0.62
TARDBP-212ENST00000611008 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
TARDBP-212ENST00000611008 CDHR5Q9HBB8 845 aa11.16□□□□□ -0.62
TARDBP-212ENST00000611008 PDZRN3Q9UPQ7 1066 aa11.16□□□□□ -0.62
TARDBP-212ENST00000611008 ARIH1Q9Y4X5 557 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-212ENST00000611008 OSBPP22059 807 aa11.15□□□□□ -0.62
TARDBP-212ENST00000611008 SPRYD3Q8NCJ5 442 aa11.15□□□□□ -0.62
TARDBP-212ENST00000611008 WDR70Q9NW82 654 aa11.15□□□□□ -0.62
TARDBP-212ENST00000611008 COPS2P61201 443 aa11.13□□□□□ -0.63
TARDBP-212ENST00000611008 SLF2Q8IX21 1173 aa11.13□□□□□ -0.63
TARDBP-212ENST00000611008 SLC4A3P48751 1232 aa11.12□□□□□ -0.63
TARDBP-212ENST00000611008 SWT1Q5T5J6 900 aaKnown RBP11.12□□□□□ -0.63
TARDBP-212ENST00000611008 ZNF787Q6DD87 383 aa11.11□□□□□ -0.63
TARDBP-212ENST00000611008 TMUB1Q9BVT8 246 aa11.1□□□□□ -0.63
TARDBP-212ENST00000611008 PADI6Q6TGC4 694 aa11.09□□□□□ -0.63
TARDBP-212ENST00000611008 TTC13Q8NBP0 860 aa11.08□□□□□ -0.64
TARDBP-212ENST00000611008 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.08□□□□□ -0.64
TARDBP-212ENST00000611008 ZPR1O75312 459 aa11.07□□□□□ -0.64
TARDBP-212ENST00000611008 PRR14Q9BWN1 585 aa11.06□□□□□ -0.64
TARDBP-212ENST00000611008 NPDC1Q9NQX5 325 aaPredicted RBP11.05□□□□□ -0.64
TARDBP-212ENST00000611008 PCDHB3Q9Y5E6 796 aa11.03□□□□□ -0.64
TARDBP-212ENST00000611008 EYA1Q99502 592 aa11.01□□□□□ -0.65
TARDBP-212ENST00000611008 SLC19A1P41440 591 aa11□□□□□ -0.65
TARDBP-212ENST00000611008 RNF223E7ERA6 249 aa10.99□□□□□ -0.65
TARDBP-212ENST00000611008 ZNF775Q96BV0 537 aaPredicted RBP10.99□□□□□ -0.65
TARDBP-212ENST00000611008 BLOC1S3Q6QNY0 202 aa10.98□□□□□ -0.65
TARDBP-212ENST00000611008 CFAP44Q96MT7 982 aa10.98□□□□□ -0.65
TARDBP-212ENST00000611008 PKDCCQ504Y2 493 aa10.97□□□□□ -0.65
TARDBP-212ENST00000611008 TRIM67Q6ZTA4 783 aa10.97□□□□□ -0.65
TARDBP-212ENST00000611008 PAXIP1Q6ZW49 1069 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms