RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 KDM5BQ9UGL1 1544 aa16.1■□□□□ 0.17
TP53-220ENST00000610623 PLEKHD1A6NEE1 506 aa16.1■□□□□ 0.17
TP53-220ENST00000610623 UBE2Q2Q8WVN8 375 aa16.1■□□□□ 0.17
TP53-220ENST00000610623 ABCC10Q5T3U5 1492 aa16.1■□□□□ 0.17
TP53-220ENST00000610623 C11orf95C9JLR9 678 aaPredicted RBP16.09■□□□□ 0.17
TP53-220ENST00000610623 PRKRIP1Q9H875 184 aaPredicted RBP16.09■□□□□ 0.17
TP53-220ENST00000610623 CFDP1Q9UEE9 299 aaPredicted RBP16.09■□□□□ 0.17
TP53-220ENST00000610623 ADGRL2O95490 1459 aa16.08■□□□□ 0.16
TP53-220ENST00000610623 SMG6Q86US8 1419 aaKnown RBP16.08■□□□□ 0.16
TP53-220ENST00000610623 RNF123Q5XPI4 1314 aa16.07■□□□□ 0.16
TP53-220ENST00000610623 HSPA5P11021 654 aaKnown RBP16.07■□□□□ 0.16
TP53-220ENST00000610623 CCDC184Q52MB2 194 aa16.07■□□□□ 0.16
TP53-220ENST00000610623 FAM9BQ8IZU0 186 aa16.07■□□□□ 0.16
TP53-220ENST00000610623 CCDC136Q96JN2 1154 aa16.07■□□□□ 0.16
TP53-220ENST00000610623 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
TP53-220ENST00000610623 CLASP1Q7Z460 1538 aa16.06■□□□□ 0.16
TP53-220ENST00000610623 ZNF644Q9H582 1327 aaPredicted RBP16.05■□□□□ 0.16
TP53-220ENST00000610623 EIF4G2P78344 907 aaKnown RBP eCLIP16.05■□□□□ 0.16
TP53-220ENST00000610623 WASHC2CQ9Y4E1 1318 aa16.05■□□□□ 0.16
TP53-220ENST00000610623 SHANK2Q9UPX8 1470 aa16.04■□□□□ 0.16
TP53-220ENST00000610623 DENND4BO75064 1496 aaPredicted RBP16.04■□□□□ 0.16
TP53-220ENST00000610623 ABCC2Q92887 1545 aa16.03■□□□□ 0.16
TP53-220ENST00000610623 PREX2Q70Z35 1606 aa16.02■□□□□ 0.15
TP53-220ENST00000610623 ARHGEF5Q12774 1597 aa16.02■□□□□ 0.15
TP53-220ENST00000610623 NCOA1Q15788 1441 aa16.01■□□□□ 0.15
TP53-220ENST00000610623 MPHOSPH9Q99550 1183 aa16■□□□□ 0.15
TP53-220ENST00000610623 NUDCQ9Y266 331 aa16■□□□□ 0.15
TP53-220ENST00000610623 PPM1GO15355 546 aaPredicted RBP16■□□□□ 0.15
TP53-220ENST00000610623 ANKRD30AQ9BXX3 1397 aa15.99■□□□□ 0.15
TP53-220ENST00000610623 CCDC7Q96M83 1385 aa15.99■□□□□ 0.15
TP53-220ENST00000610623 NEFMP07197 916 aa15.99■□□□□ 0.15
TP53-220ENST00000610623 ERCC6L2Q5T890 1561 aa15.98■□□□□ 0.15
TP53-220ENST00000610623 NPM1P06748 294 aaKnown RBP eCLIP15.97■□□□□ 0.15
TP53-220ENST00000610623 CDC42BPBQ9Y5S2 1711 aa15.97■□□□□ 0.15
TP53-220ENST00000610623 UHRF1BP1LA0JNW5 1464 aa15.97■□□□□ 0.15
TP53-220ENST00000610623 ZNF777Q9ULD5 760 aaPredicted RBP15.96■□□□□ 0.15
TP53-220ENST00000610623 PAXIP1Q6ZW49 1069 aaPredicted RBP15.95■□□□□ 0.14
TP53-220ENST00000610623 TCERG1O14776 1098 aaKnown RBP15.95■□□□□ 0.14
TP53-220ENST00000610623 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.95■□□□□ 0.14
TP53-220ENST00000610623 C9orf84Q5VXU9 1444 aa15.94■□□□□ 0.14
TP53-220ENST00000610623 SAMD9LQ8IVG5 1584 aa15.94■□□□□ 0.14
TP53-220ENST00000610623 MYO5CQ9NQX4 1742 aa15.94■□□□□ 0.14
TP53-220ENST00000610623 PZPP20742 1482 aa15.93■□□□□ 0.14
TP53-220ENST00000610623 ANKRD30BQ9BXX2 1392 aa15.93■□□□□ 0.14
TP53-220ENST00000610623 CFAP44Q96MT7 982 aa15.93■□□□□ 0.14
TP53-220ENST00000610623 RPRD2Q5VT52 1461 aaKnown RBP15.92■□□□□ 0.14
TP53-220ENST00000610623 ZCCHC11Q5TAX3 1644 aaKnown RBP15.92■□□□□ 0.14
TP53-220ENST00000610623 TTC37Q6PGP7 1564 aa15.92■□□□□ 0.14
TP53-220ENST00000610623 CCDC141Q6ZP82 1450 aa15.91■□□□□ 0.14
TP53-220ENST00000610623 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
TP53-220ENST00000610623 RSPH4AQ5TD94 716 aa15.91■□□□□ 0.14
TP53-220ENST00000610623 MBD5Q9P267 1494 aa15.9■□□□□ 0.14
TP53-220ENST00000610623 ANKRD50Q9ULJ7 1429 aa15.9■□□□□ 0.14
TP53-220ENST00000610623 MAST1Q9Y2H9 1570 aa15.9■□□□□ 0.14
TP53-220ENST00000610623 KDM5DQ9BY66 1539 aa15.9■□□□□ 0.14
TP53-220ENST00000610623 POLR1AO95602 1720 aaPredicted RBP15.9■□□□□ 0.14
TP53-220ENST00000610623 PLEKHH2Q8IVE3 1493 aa15.89■□□□□ 0.13
TP53-220ENST00000610623 MS4A1P11836 297 aa15.89■□□□□ 0.13
TP53-220ENST00000610623 BBXQ8WY36 941 aaPredicted RBP15.89■□□□□ 0.13
TP53-220ENST00000610623 TSPY4P0CV99 314 aa15.89■□□□□ 0.13
TP53-220ENST00000610623 TSPY10P0CW01 314 aa15.89■□□□□ 0.13
TP53-220ENST00000610623 LAS1LQ9Y4W2 734 aaKnown RBP15.89■□□□□ 0.13
TP53-220ENST00000610623 ARHGAP5Q13017 1502 aa15.88■□□□□ 0.13
TP53-220ENST00000610623 PDE4AP27815 886 aa15.87■□□□□ 0.13
TP53-220ENST00000610623 GSE1Q14687 1217 aa15.87■□□□□ 0.13
TP53-220ENST00000610623 KIAA1107Q9UPP5 1409 aa15.87■□□□□ 0.13
TP53-220ENST00000610623 NPM2Q86SE8 214 aaKnown RBP15.86■□□□□ 0.13
TP53-220ENST00000610623 BACH2Q9BYV9 841 aa15.86■□□□□ 0.13
TP53-220ENST00000610623 TEX14Q8IWB6 1497 aa15.85■□□□□ 0.13
TP53-220ENST00000610623 DDRGK1Q96HY6 314 aa15.85■□□□□ 0.13
TP53-220ENST00000610623 SYCP2Q9BX26 1530 aa15.84■□□□□ 0.13
TP53-220ENST00000610623 KIF7Q2M1P5 1343 aa15.84■□□□□ 0.13
TP53-220ENST00000610623 KIF15Q9NS87 1388 aa15.83■□□□□ 0.13
TP53-220ENST00000610623 PLXNC1O60486 1568 aa15.83■□□□□ 0.12
TP53-220ENST00000610623 SPATA31E1Q6ZUB1 1445 aa15.83■□□□□ 0.12
TP53-220ENST00000610623 HNRNPMP52272 730 aaKnown RBP eCLIP15.82■□□□□ 0.12
TP53-220ENST00000610623 L3MBTL2Q969R5 705 aa15.82■□□□□ 0.12
TP53-220ENST00000610623 BRPF3Q9ULD4 1205 aa15.82■□□□□ 0.12
TP53-220ENST00000610623 ARAP3Q8WWN8 1544 aa15.81■□□□□ 0.12
TP53-220ENST00000610623 PLCH2O75038 1416 aa15.8■□□□□ 0.12
TP53-220ENST00000610623 RSPH6AQ9H0K4 717 aa15.8■□□□□ 0.12
TP53-220ENST00000610623 HOMEZQ8IX15 550 aa15.79■□□□□ 0.12
TP53-220ENST00000610623 ECM2O94769 699 aaPredicted RBP15.79■□□□□ 0.12
TP53-220ENST00000610623 UNC13BO14795 1591 aa15.79■□□□□ 0.12
TP53-220ENST00000610623 DHX29Q7Z478 1369 aaKnown RBP15.78■□□□□ 0.12
TP53-220ENST00000610623 NUP155O75694 1391 aa15.78■□□□□ 0.12
TP53-220ENST00000610623 EIF5BO60841 1220 aaKnown RBP15.78■□□□□ 0.12
TP53-220ENST00000610623 RRP1P56182 461 aaKnown RBP15.78■□□□□ 0.12
TP53-220ENST00000610623 ABCC1P33527 1531 aa15.76■□□□□ 0.11
TP53-220ENST00000610623 NFKBIBQ15653 356 aa15.76■□□□□ 0.11
TP53-220ENST00000610623 PNISRQ8TF01 805 aaKnown RBP15.76■□□□□ 0.11
TP53-220ENST00000610623 DUOX2Q9NRD8 1548 aa15.74■□□□□ 0.11
TP53-220ENST00000610623 EFCAB2Q5VUJ9 269 aa15.74■□□□□ 0.11
TP53-220ENST00000610623 EXOC6Q8TAG9 804 aa15.74■□□□□ 0.11
TP53-220ENST00000610623 ARID4BQ4LE39 1312 aaPredicted RBP15.74■□□□□ 0.11
TP53-220ENST00000610623 ARHGEF12Q9NZN5 1544 aa15.74■□□□□ 0.11
TP53-220ENST00000610623 FAM43AQ8N2R8 423 aa15.73■□□□□ 0.11
TP53-220ENST00000610623 WDR7Q9Y4E6 1490 aa15.73■□□□□ 0.11
TP53-220ENST00000610623 FAM135AQ9P2D6 1515 aa15.73■□□□□ 0.11
TP53-220ENST00000610623 NBPF8Q3BBV2 869 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms