RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 NACADO15069 1562 aa24.92■■□□□ 1.58
COL15A1-205ENST00000610452 TRAK2O60296 914 aa24.91■■□□□ 1.58
COL15A1-205ENST00000610452 FOXD1Q16676 465 aa24.91■■□□□ 1.58
COL15A1-205ENST00000610452 PLPPR3Q6T4P5 718 aa24.91■■□□□ 1.58
COL15A1-205ENST00000610452 ARHGAP35Q9NRY4 1499 aa24.9■■□□□ 1.58
COL15A1-205ENST00000610452 MSH5O43196 834 aa24.89■■□□□ 1.58
COL15A1-205ENST00000610452 FOXD4L6Q3SYB3 417 aaPredicted RBP24.89■■□□□ 1.57
COL15A1-205ENST00000610452 FOXD4L3Q6VB84 417 aaPredicted RBP24.89■■□□□ 1.57
COL15A1-205ENST00000610452 BECN2A8MW95 431 aa24.88■■□□□ 1.57
COL15A1-205ENST00000610452 ATP6V1DQ9Y5K8 247 aa24.88■■□□□ 1.57
COL15A1-205ENST00000610452 DHX57Q6P158 1386 aaKnown RBP24.88■■□□□ 1.57
COL15A1-205ENST00000610452 PHLDB1Q86UU1 1377 aa24.88■■□□□ 1.57
COL15A1-205ENST00000610452 HSP90B1P14625 803 aaKnown RBP24.88■■□□□ 1.57
COL15A1-205ENST00000610452 ARGLU1Q9NWB6 273 aaPredicted RBP24.87■■□□□ 1.57
COL15A1-205ENST00000610452 CWC15Q9P013 229 aaKnown RBP24.87■■□□□ 1.57
COL15A1-205ENST00000610452 HMGN5P82970 282 aaKnown RBP24.87■■□□□ 1.57
COL15A1-205ENST00000610452 ZMYND15Q9H091 742 aa24.87■■□□□ 1.57
COL15A1-205ENST00000610452 TRIM6-TRIM34B2RNG4 842 aa24.85■■□□□ 1.57
COL15A1-205ENST00000610452 CCDC173Q0VFZ6 552 aa24.85■■□□□ 1.57
COL15A1-205ENST00000610452 CGNL1Q0VF96 1302 aa24.84■■□□□ 1.57
COL15A1-205ENST00000610452 IFT57Q9NWB7 429 aa24.83■■□□□ 1.57
COL15A1-205ENST00000610452 C14orf37Q86TY3 774 aa24.82■■□□□ 1.56
COL15A1-205ENST00000610452 MYBBP1AQ9BQG0 1328 aaKnown RBP24.82■■□□□ 1.56
COL15A1-205ENST00000610452 MPHOSPH9Q99550 1183 aa24.82■■□□□ 1.56
COL15A1-205ENST00000610452 U2AF1L5P0DN76 240 aaPredicted RBP24.82■■□□□ 1.56
COL15A1-205ENST00000610452 U2AF1Q01081 240 aaKnown RBP eCLIP24.82■■□□□ 1.56
COL15A1-205ENST00000610452 CCDC146Q8IYE0 955 aa24.82■■□□□ 1.56
COL15A1-205ENST00000610452 CCDC34Q96HJ3 373 aa24.81■■□□□ 1.56
COL15A1-205ENST00000610452 CUX2O14529 1486 aa24.81■■□□□ 1.56
COL15A1-205ENST00000610452 MCTP1Q6DN14 999 aa24.81■■□□□ 1.56
COL15A1-205ENST00000610452 HOMER1Q86YM7 354 aa24.8■■□□□ 1.56
COL15A1-205ENST00000610452 MROH2BQ7Z745 1585 aa24.8■■□□□ 1.56
COL15A1-205ENST00000610452 ESPNB1AK53 854 aa24.8■■□□□ 1.56
COL15A1-205ENST00000610452 ROCK2O75116 1388 aaKnown RBP24.8■■□□□ 1.56
COL15A1-205ENST00000610452 NUCB2P80303 420 aa24.8■■□□□ 1.56
COL15A1-205ENST00000610452 PKD2Q13563 968 aa24.8■■□□□ 1.56
COL15A1-205ENST00000610452 PATL2C9JE40 543 aaKnown RBP24.78■■□□□ 1.56
COL15A1-205ENST00000610452 KIF15Q9NS87 1388 aa24.77■■□□□ 1.56
COL15A1-205ENST00000610452 HMMRO75330 724 aa24.77■■□□□ 1.56
COL15A1-205ENST00000610452 UQCRHLA0A096LP55 91 aa24.77■■□□□ 1.56
COL15A1-205ENST00000610452 UQCRHP07919 91 aa24.77■■□□□ 1.56
COL15A1-205ENST00000610452 L3MBTL2Q969R5 705 aa24.76■■□□□ 1.55
COL15A1-205ENST00000610452 COG6Q9Y2V7 657 aa24.76■■□□□ 1.55
COL15A1-205ENST00000610452 TAF3Q5VWG9 929 aa24.76■■□□□ 1.55
COL15A1-205ENST00000610452 MNS1Q8NEH6 495 aa24.76■■□□□ 1.55
COL15A1-205ENST00000610452 C22orf23Q9BZE7 217 aa24.75■■□□□ 1.55
COL15A1-205ENST00000610452 ISY1Q9ULR0 285 aaKnown RBP24.75■■□□□ 1.55
COL15A1-205ENST00000610452 CCDC70Q6NSX1 233 aa24.74■■□□□ 1.55
COL15A1-205ENST00000610452 SF3A1Q15459 793 aaKnown RBP24.73■■□□□ 1.55
COL15A1-205ENST00000610452 ANKRD45Q5TZF3 282 aa24.73■■□□□ 1.55
COL15A1-205ENST00000610452 RNF214Q8ND24 703 aa24.73■■□□□ 1.55
COL15A1-205ENST00000610452 GRPEL1Q9HAV7 217 aa24.73■■□□□ 1.55
COL15A1-205ENST00000610452 HSP90B2PQ58FF3 399 aa24.72■■□□□ 1.55
COL15A1-205ENST00000610452 PLEKHG5O94827 1062 aa24.71■■□□□ 1.55
COL15A1-205ENST00000610452 BCL11BQ9C0K0 894 aaPredicted RBP24.71■■□□□ 1.55
COL15A1-205ENST00000610452 POGKQ9P215 609 aa24.71■■□□□ 1.55
COL15A1-205ENST00000610452 CREBRFQ8IUR6 639 aa24.71■■□□□ 1.55
COL15A1-205ENST00000610452 MAPK8IP2Q13387 824 aaPredicted RBP24.7■■□□□ 1.54
COL15A1-205ENST00000610452 ACBD3Q9H3P7 528 aa24.7■■□□□ 1.54
COL15A1-205ENST00000610452 PDCL3Q9H2J4 239 aa24.69■■□□□ 1.54
COL15A1-205ENST00000610452 BACH2Q9BYV9 841 aa24.69■■□□□ 1.54
COL15A1-205ENST00000610452 KIF3AQ9Y496 699 aa24.69■■□□□ 1.54
COL15A1-205ENST00000610452 FMN1Q68DA7 1419 aa24.68■■□□□ 1.54
COL15A1-205ENST00000610452 CAVIN1Q6NZI2 390 aaKnown RBP24.67■■□□□ 1.54
COL15A1-205ENST00000610452 E9PSI1 815 aa24.67■■□□□ 1.54
COL15A1-205ENST00000610452 RDXP35241 583 aaKnown RBP24.67■■□□□ 1.54
COL15A1-205ENST00000610452 PDE4CQ08493 712 aa24.66■■□□□ 1.54
COL15A1-205ENST00000610452 H0YHG0 523 aa24.66■■□□□ 1.54
COL15A1-205ENST00000610452 BCL2L13Q9BXK5 485 aa24.66■■□□□ 1.54
COL15A1-205ENST00000610452 H3BQV1 296 aa24.65■■□□□ 1.54
COL15A1-205ENST00000610452 IFFO2Q5TF58 517 aa24.65■■□□□ 1.54
COL15A1-205ENST00000610452 ZKSCAN2Q63HK3 967 aa24.64■■□□□ 1.54
COL15A1-205ENST00000610452 A0A0G2JS52 829 aa24.64■■□□□ 1.53
COL15A1-205ENST00000610452 TPD52L1Q16890 204 aaPredicted RBP24.64■■□□□ 1.53
COL15A1-205ENST00000610452 PRDM10Q9NQV6 1147 aa24.63■■□□□ 1.53
COL15A1-205ENST00000610452 CHMP3Q9Y3E7 222 aa24.63■■□□□ 1.53
COL15A1-205ENST00000610452 REC8O95072 547 aa24.63■■□□□ 1.53
COL15A1-205ENST00000610452 TSR1Q2NL82 804 aaKnown RBP24.63■■□□□ 1.53
COL15A1-205ENST00000610452 TPM1P09493 284 aa24.63■■□□□ 1.53
COL15A1-205ENST00000610452 GPATCH3Q96I76 525 aa24.62■■□□□ 1.53
COL15A1-205ENST00000610452 LEKR1Q6ZMV7 388 aa24.61■■□□□ 1.53
COL15A1-205ENST00000610452 RTF1Q92541 710 aaKnown RBP24.61■■□□□ 1.53
COL15A1-205ENST00000610452 AK7Q96M32 723 aa24.6■■□□□ 1.53
COL15A1-205ENST00000610452 SASS6Q6UVJ0 657 aa24.59■■□□□ 1.53
COL15A1-205ENST00000610452 ZSCAN30Q86W11 494 aa24.57■■□□□ 1.52
COL15A1-205ENST00000610452 RILPL2Q969X0 211 aa24.57■■□□□ 1.52
COL15A1-205ENST00000610452 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
COL15A1-205ENST00000610452 MBD3O95983 291 aa24.57■■□□□ 1.52
COL15A1-205ENST00000610452 FAM184AQ8NB25 1140 aa24.57■■□□□ 1.52
COL15A1-205ENST00000610452 BICD2Q8TD16 824 aa24.56■■□□□ 1.52
COL15A1-205ENST00000610452 TSPY26PQ9H489 355 aa24.56■■□□□ 1.52
COL15A1-205ENST00000610452 SRPK2P78362 688 aaKnown RBP24.56■■□□□ 1.52
COL15A1-205ENST00000610452 PES1O00541 588 aaKnown RBP24.55■■□□□ 1.52
COL15A1-205ENST00000610452 RUFY1Q96T51 708 aa24.55■■□□□ 1.52
COL15A1-205ENST00000610452 CLSTN1O94985 981 aa24.55■■□□□ 1.52
COL15A1-205ENST00000610452 NUP155O75694 1391 aa24.55■■□□□ 1.52
COL15A1-205ENST00000610452 RAPGEF2Q9Y4G8 1499 aa24.54■■□□□ 1.52
COL15A1-205ENST00000610452 RRP7AQ9Y3A4 280 aaKnown RBP24.54■■□□□ 1.52
COL15A1-205ENST00000610452 ZHX1Q9UKY1 873 aaPredicted RBP24.53■■□□□ 1.52
COL15A1-205ENST00000610452 SLC4A10Q6U841 1118 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms