RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 PCDHGA10Q9Y5H3 936 aa8.97□□□□□ -0.97
RNU6-88P-201ENST00000606801 ZDHHC16Q969W1 377 aa8.96□□□□□ -0.98
RNU6-88P-201ENST00000606801 BCL2L12Q9HB09 334 aa8.96□□□□□ -0.98
RNU6-88P-201ENST00000606801 GPR37O15354 613 aa8.95□□□□□ -0.98
RNU6-88P-201ENST00000606801 ZMYND10O75800 440 aa8.95□□□□□ -0.98
RNU6-88P-201ENST00000606801 SPNS2Q8IVW8 549 aa8.95□□□□□ -0.98
RNU6-88P-201ENST00000606801 LSM11P83369 360 aaKnown RBP eCLIP8.94□□□□□ -0.98
RNU6-88P-201ENST00000606801 ADAM33Q9BZ11 813 aa8.94□□□□□ -0.98
RNU6-88P-201ENST00000606801 PSEN2P49810 448 aa8.93□□□□□ -0.98
RNU6-88P-201ENST00000606801 TYW1BQ6NUM6 668 aa8.93□□□□□ -0.98
RNU6-88P-201ENST00000606801 ANKRD13DQ6ZTN6 518 aa8.93□□□□□ -0.98
RNU6-88P-201ENST00000606801 FBXW7Q969H0 707 aa8.93□□□□□ -0.98
RNU6-88P-201ENST00000606801 EPAS1Q99814 870 aa8.93□□□□□ -0.98
RNU6-88P-201ENST00000606801 DMRTA1Q5VZB9 504 aa8.92□□□□□ -0.98
RNU6-88P-201ENST00000606801 KCNK17Q96T54 332 aa8.92□□□□□ -0.98
RNU6-88P-201ENST00000606801 PLSCR2Q9NRY7 297 aa8.92□□□□□ -0.98
RNU6-88P-201ENST00000606801 PTPREP23469 700 aa8.91□□□□□ -0.98
RNU6-88P-201ENST00000606801 BARGINQ6ZT62 677 aa8.91□□□□□ -0.98
RNU6-88P-201ENST00000606801 GPIHBP1Q8IV16 184 aa8.91□□□□□ -0.98
RNU6-88P-201ENST00000606801 KCNH8Q96L42 1107 aa8.91□□□□□ -0.98
RNU6-88P-201ENST00000606801 SLC24A3Q9HC58 644 aa8.89□□□□□ -0.99
RNU6-88P-201ENST00000606801 NUTM2FA1L443 756 aa8.87□□□□□ -0.99
RNU6-88P-201ENST00000606801 TK2O00142 265 aa8.87□□□□□ -0.99
RNU6-88P-201ENST00000606801 EN1Q05925 392 aaPredicted RBP8.87□□□□□ -0.99
RNU6-88P-201ENST00000606801 C6orf132Q5T0Z8 1188 aa8.87□□□□□ -0.99
RNU6-88P-201ENST00000606801 ADGRD1Q6QNK2 874 aa8.87□□□□□ -0.99
RNU6-88P-201ENST00000606801 NPDC1Q9NQX5 325 aaPredicted RBP8.87□□□□□ -0.99
RNU6-88P-201ENST00000606801 MMRN1Q13201 1228 aa8.86□□□□□ -0.99
RNU6-88P-201ENST00000606801 CDHR5Q9HBB8 845 aa8.86□□□□□ -0.99
RNU6-88P-201ENST00000606801 FECHP22830 423 aa8.85□□□□□ -0.99
RNU6-88P-201ENST00000606801 TSR1Q2NL82 804 aaKnown RBP8.85□□□□□ -0.99
RNU6-88P-201ENST00000606801 RBM33Q96EV2 1170 aaKnown RBP8.85□□□□□ -0.99
RNU6-88P-201ENST00000606801 SLC4A5Q9BY07 1137 aa8.85□□□□□ -0.99
RNU6-88P-201ENST00000606801 PPP1R3GB7ZBB8 358 aa8.84□□□□□ -0.99
RNU6-88P-201ENST00000606801 COL9A1P20849 921 aa8.84□□□□□ -0.99
RNU6-88P-201ENST00000606801 PTGDRQ13258 359 aa8.84□□□□□ -0.99
RNU6-88P-201ENST00000606801 ZBED2Q9BTP6 218 aa8.84□□□□□ -0.99
RNU6-88P-201ENST00000606801 VPS9D1Q9Y2B5 631 aa8.84□□□□□ -0.99
RNU6-88P-201ENST00000606801 HRO43593 1189 aa8.83□□□□□ -1
RNU6-88P-201ENST00000606801 MAP3K7O43318 606 aa8.82□□□□□ -1
RNU6-88P-201ENST00000606801 GNPATO15228 680 aa8.81□□□□□ -1
RNU6-88P-201ENST00000606801 FCHSD2O94868 740 aa8.8□□□□□ -1
RNU6-88P-201ENST00000606801 HIC1Q14526 733 aa8.8□□□□□ -1
RNU6-88P-201ENST00000606801 MYT1LQ9UL68 1186 aa8.8□□□□□ -1
RNU6-88P-201ENST00000606801 BHMG1C9JSJ3 638 aaPredicted RBP8.78□□□□□ -1
RNU6-88P-201ENST00000606801 BRPF1P55201 1214 aaPredicted RBP8.77□□□□□ -1.01
RNU6-88P-201ENST00000606801 PROX2Q3B8N5 592 aa8.77□□□□□ -1.01
RNU6-88P-201ENST00000606801 KRI1Q8N9T8 703 aaKnown RBP8.77□□□□□ -1.01
RNU6-88P-201ENST00000606801 AK7Q96M32 723 aa8.77□□□□□ -1.01
RNU6-88P-201ENST00000606801 IRF6O14896 467 aa8.76□□□□□ -1.01
RNU6-88P-201ENST00000606801 TRIM66O15016 1216 aa8.76□□□□□ -1.01
RNU6-88P-201ENST00000606801 ONECUT3O60422 494 aaPredicted RBP8.76□□□□□ -1.01
RNU6-88P-201ENST00000606801 MAP2K5Q13163 448 aa8.76□□□□□ -1.01
RNU6-88P-201ENST00000606801 CERKQ8TCT0 537 aa8.76□□□□□ -1.01
RNU6-88P-201ENST00000606801 RNF166Q96A37 237 aaPredicted RBP8.76□□□□□ -1.01
RNU6-88P-201ENST00000606801 MINK1Q8N4C8 1332 aaPredicted RBP8.76□□□□□ -1.01
RNU6-88P-201ENST00000606801 STAC3Q96MF2 364 aa8.75□□□□□ -1.01
RNU6-88P-201ENST00000606801 RABGEF1Q9UJ41 708 aa8.75□□□□□ -1.01
RNU6-88P-201ENST00000606801 TRIM6-TRIM34B2RNG4 842 aa8.74□□□□□ -1.01
RNU6-88P-201ENST00000606801 CCDC102AQ96A19 550 aa8.74□□□□□ -1.01
RNU6-88P-201ENST00000606801 TTC13Q8NBP0 860 aa8.73□□□□□ -1.01
RNU6-88P-201ENST00000606801 PRSS12P56730 875 aa8.72□□□□□ -1.01
RNU6-88P-201ENST00000606801 CDCA7LQ96GN5 454 aa8.72□□□□□ -1.01
RNU6-88P-201ENST00000606801 NBPF3Q9H094 633 aa8.72□□□□□ -1.01
RNU6-88P-201ENST00000606801 KIAA1468Q9P260 1216 aa8.72□□□□□ -1.01
RNU6-88P-201ENST00000606801 FAM198AQ9UFP1 575 aa8.72□□□□□ -1.01
RNU6-88P-201ENST00000606801 TSKSQ9UJT2 592 aa8.72□□□□□ -1.01
RNU6-88P-201ENST00000606801 MRPL50Q8N5N7 158 aaKnown RBP8.71□□□□□ -1.02
RNU6-88P-201ENST00000606801 PDE4DQ08499 809 aa8.7□□□□□ -1.02
RNU6-88P-201ENST00000606801 PADI6Q6TGC4 694 aa8.7□□□□□ -1.02
RNU6-88P-201ENST00000606801 FAM161AQ3B820 660 aa8.69□□□□□ -1.02
RNU6-88P-201ENST00000606801 PHOX2BQ99453 314 aa8.69□□□□□ -1.02
RNU6-88P-201ENST00000606801 RBM27Q9P2N5 1060 aaKnown RBP8.69□□□□□ -1.02
RNU6-88P-201ENST00000606801 C3orf80F5H4A9 247 aa8.68□□□□□ -1.02
RNU6-88P-201ENST00000606801 NEUROD2Q15784 382 aa8.68□□□□□ -1.02
RNU6-88P-201ENST00000606801 LAPTM4BQ86VI4 370 aa8.68□□□□□ -1.02
RNU6-88P-201ENST00000606801 PACS2Q86VP3 889 aa8.68□□□□□ -1.02
RNU6-88P-201ENST00000606801 GPBP1L1Q9HC44 474 aaPredicted RBP8.68□□□□□ -1.02
RNU6-88P-201ENST00000606801 AMHR2Q16671 573 aa8.67□□□□□ -1.02
RNU6-88P-201ENST00000606801 KCTD12Q96CX2 325 aaKnown RBP8.67□□□□□ -1.02
RNU6-88P-201ENST00000606801 GOLGA8CPA6NN73 597 aa8.66□□□□□ -1.02
RNU6-88P-201ENST00000606801 REPIN1Q9BWE0 567 aaKnown RBP8.66□□□□□ -1.02
RNU6-88P-201ENST00000606801 ADGRG1Q9Y653 693 aa8.66□□□□□ -1.02
RNU6-88P-201ENST00000606801 SEPT9Q9UHD8 586 aaPredicted RBP8.65□□□□□ -1.02
RNU6-88P-201ENST00000606801 FAM98CQ17RN3 349 aaKnown RBP8.64□□□□□ -1.03
RNU6-88P-201ENST00000606801 TATDN2Q93075 761 aa8.64□□□□□ -1.03
RNU6-88P-201ENST00000606801 WNT2BQ93097 391 aa8.64□□□□□ -1.03
RNU6-88P-201ENST00000606801 TMUB1Q9BVT8 246 aa8.64□□□□□ -1.03
RNU6-88P-201ENST00000606801 METTL3Q86U44 580 aaKnown RBP8.63□□□□□ -1.03
RNU6-88P-201ENST00000606801 PARP9Q8IXQ6 854 aa8.63□□□□□ -1.03
RNU6-88P-201ENST00000606801 PXYLP1Q8TE99 480 aa8.63□□□□□ -1.03
RNU6-88P-201ENST00000606801 ZFRQ96KR1 1074 aaKnown RBP8.63□□□□□ -1.03
RNU6-88P-201ENST00000606801 KDM4CQ9H3R0 1056 aa8.63□□□□□ -1.03
RNU6-88P-201ENST00000606801 NBPF26B4DH59 902 aa8.62□□□□□ -1.03
RNU6-88P-201ENST00000606801 NLRP7Q8WX94 980 aa8.62□□□□□ -1.03
RNU6-88P-201ENST00000606801 HCSTQ9UBK5 93 aa8.62□□□□□ -1.03
RNU6-88P-201ENST00000606801 PNMA3Q9UL41 463 aa8.62□□□□□ -1.03
RNU6-88P-201ENST00000606801 SMAPO00193 183 aa8.61□□□□□ -1.03
RNU6-88P-201ENST00000606801 THSD4Q6ZMP0 1018 aa8.61□□□□□ -1.03
RNU6-88P-201ENST00000606801 NUDT18Q6ZVK8 323 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms