RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 DMRTA1Q5VZB9 504 aa12.55□□□□□ -0.4
FARP1-241ENST00000602272 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
FARP1-241ENST00000602272 BCL2L12Q9HB09 334 aa12.55□□□□□ -0.4
FARP1-241ENST00000602272 HCSTQ9UBK5 93 aa12.55□□□□□ -0.4
FARP1-241ENST00000602272 EVI5O60447 810 aa12.54□□□□□ -0.4
FARP1-241ENST00000602272 FOSBP53539 338 aa12.54□□□□□ -0.4
FARP1-241ENST00000602272 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
FARP1-241ENST00000602272 HMGXB3Q12766 1538 aa12.53□□□□□ -0.4
FARP1-241ENST00000602272 HRO43593 1189 aa12.53□□□□□ -0.4
FARP1-241ENST00000602272 JPH4Q96JJ6 628 aa12.52□□□□□ -0.41
FARP1-241ENST00000602272 PTPREP23469 700 aa12.51□□□□□ -0.41
FARP1-241ENST00000602272 CADPS2Q86UW7 1296 aa12.5□□□□□ -0.41
FARP1-241ENST00000602272 SLC4A5Q9BY07 1137 aa12.5□□□□□ -0.41
FARP1-241ENST00000602272 WIZO95785 1651 aa12.5□□□□□ -0.41
FARP1-241ENST00000602272 RSF1Q96T23 1441 aaPredicted RBP12.49□□□□□ -0.41
FARP1-241ENST00000602272 BAZ1BQ9UIG0 1483 aaKnown RBP12.48□□□□□ -0.41
FARP1-241ENST00000602272 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
FARP1-241ENST00000602272 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
FARP1-241ENST00000602272 EMILIN3Q9NT22 766 aa12.45□□□□□ -0.42
FARP1-241ENST00000602272 CAMK2BQ13554 666 aa12.4□□□□□ -0.42
FARP1-241ENST00000602272 FBXW7Q969H0 707 aa12.4□□□□□ -0.42
FARP1-241ENST00000602272 KCTD12Q96CX2 325 aaKnown RBP12.4□□□□□ -0.42
FARP1-241ENST00000602272 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
FARP1-241ENST00000602272 ADAM33Q9BZ11 813 aa12.39□□□□□ -0.43
FARP1-241ENST00000602272 PLA2G2EQ9NZK7 142 aa12.38□□□□□ -0.43
FARP1-241ENST00000602272 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
FARP1-241ENST00000602272 PHF14O94880 888 aa12.37□□□□□ -0.43
FARP1-241ENST00000602272 TYW1BQ6NUM6 668 aa12.36□□□□□ -0.43
FARP1-241ENST00000602272 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
FARP1-241ENST00000602272 PCDHGA10Q9Y5H3 936 aa12.36□□□□□ -0.43
FARP1-241ENST00000602272 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
FARP1-241ENST00000602272 BHMG1C9JSJ3 638 aaPredicted RBP12.35□□□□□ -0.43
FARP1-241ENST00000602272 PPP1R3GB7ZBB8 358 aa12.34□□□□□ -0.43
FARP1-241ENST00000602272 MRPL50Q8N5N7 158 aaKnown RBP12.34□□□□□ -0.43
FARP1-241ENST00000602272 EPAS1Q99814 870 aa12.34□□□□□ -0.43
FARP1-241ENST00000602272 DPYSL4O14531 572 aa12.3□□□□□ -0.44
FARP1-241ENST00000602272 WNT2BQ93097 391 aa12.28□□□□□ -0.44
FARP1-241ENST00000602272 RABGEF1Q9UJ41 708 aa12.28□□□□□ -0.44
FARP1-241ENST00000602272 WDR70Q9NW82 654 aa12.27□□□□□ -0.45
FARP1-241ENST00000602272 PTPN5P54829 565 aa12.26□□□□□ -0.45
FARP1-241ENST00000602272 THSD4Q6ZMP0 1018 aa12.26□□□□□ -0.45
FARP1-241ENST00000602272 ONECUT3O60422 494 aaPredicted RBP12.25□□□□□ -0.45
FARP1-241ENST00000602272 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
FARP1-241ENST00000602272 LAMC3Q9Y6N6 1575 aa12.24□□□□□ -0.45
FARP1-241ENST00000602272 C6orf132Q5T0Z8 1188 aa12.23□□□□□ -0.45
FARP1-241ENST00000602272 COL9A1P20849 921 aa12.22□□□□□ -0.45
FARP1-241ENST00000602272 LAPTM4BQ86VI4 370 aa12.22□□□□□ -0.45
FARP1-241ENST00000602272 NESP48681 1621 aa12.22□□□□□ -0.45
FARP1-241ENST00000602272 PDIA6Q15084 440 aa12.21□□□□□ -0.45
FARP1-241ENST00000602272 E2F4Q16254 413 aa12.2□□□□□ -0.46
FARP1-241ENST00000602272 PROX2Q3B8N5 592 aa12.2□□□□□ -0.46
FARP1-241ENST00000602272 ANKK1Q8NFD2 765 aa12.2□□□□□ -0.46
FARP1-241ENST00000602272 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
FARP1-241ENST00000602272 DDX12PQ92771 950 aa12.19□□□□□ -0.46
FARP1-241ENST00000602272 SUPT5HO00267 1087 aaKnown RBP12.18□□□□□ -0.46
FARP1-241ENST00000602272 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
FARP1-241ENST00000602272 KCNV2Q8TDN2 545 aa12.18□□□□□ -0.46
FARP1-241ENST00000602272 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
FARP1-241ENST00000602272 KIAA1468Q9P260 1216 aa12.17□□□□□ -0.46
FARP1-241ENST00000602272 ARIH1Q9Y4X5 557 aaPredicted RBP12.17□□□□□ -0.46
FARP1-241ENST00000602272 P3H3Q8IVL6 736 aa12.16□□□□□ -0.46
FARP1-241ENST00000602272 RBM33Q96EV2 1170 aaKnown RBP12.16□□□□□ -0.46
FARP1-241ENST00000602272 CFTRP13569 1480 aa12.14□□□□□ -0.47
FARP1-241ENST00000602272 TRIM6-TRIM34B2RNG4 842 aa12.14□□□□□ -0.47
FARP1-241ENST00000602272 EN1Q05925 392 aaPredicted RBP12.14□□□□□ -0.47
FARP1-241ENST00000602272 NBR1Q14596 966 aa12.14□□□□□ -0.47
FARP1-241ENST00000602272 PRDM2Q13029 1718 aa12.14□□□□□ -0.47
FARP1-241ENST00000602272 NYAP1Q6ZVC0 841 aa12.13□□□□□ -0.47
FARP1-241ENST00000602272 BCANQ96GW7 911 aa12.13□□□□□ -0.47
FARP1-241ENST00000602272 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
FARP1-241ENST00000602272 MAP3K7O43318 606 aa12.12□□□□□ -0.47
FARP1-241ENST00000602272 ERCC6Q03468 1493 aa12.12□□□□□ -0.47
FARP1-241ENST00000602272 ZFRQ96KR1 1074 aaKnown RBP12.11□□□□□ -0.47
FARP1-241ENST00000602272 PDS5BQ9NTI5 1447 aa12.11□□□□□ -0.47
FARP1-241ENST00000602272 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
FARP1-241ENST00000602272 RGS20O76081 388 aa12.1□□□□□ -0.47
FARP1-241ENST00000602272 PACS2Q86VP3 889 aa12.1□□□□□ -0.47
FARP1-241ENST00000602272 CERKQ8TCT0 537 aa12.1□□□□□ -0.47
FARP1-241ENST00000602272 FAM98CQ17RN3 349 aaKnown RBP12.09□□□□□ -0.47
FARP1-241ENST00000602272 ARHGEF1Q92888 912 aaKnown RBP12.07□□□□□ -0.48
FARP1-241ENST00000602272 THOC2Q8NI27 1593 aaKnown RBP12.06□□□□□ -0.48
FARP1-241ENST00000602272 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
FARP1-241ENST00000602272 FANCD2Q9BXW9 1451 aa12.05□□□□□ -0.48
FARP1-241ENST00000602272 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
FARP1-241ENST00000602272 BCAMP50895 628 aa12.04□□□□□ -0.48
FARP1-241ENST00000602272 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
FARP1-241ENST00000602272 GRXCR2A6NFK2 248 aa12.03□□□□□ -0.48
FARP1-241ENST00000602272 LRCH3Q96II8 777 aa12.02□□□□□ -0.49
FARP1-241ENST00000602272 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.02□□□□□ -0.49
FARP1-241ENST00000602272 A0A0G2JS52 829 aa12.01□□□□□ -0.49
FARP1-241ENST00000602272 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
FARP1-241ENST00000602272 PRSS12P56730 875 aa12.01□□□□□ -0.49
FARP1-241ENST00000602272 CDCA7LQ96GN5 454 aa12□□□□□ -0.49
FARP1-241ENST00000602272 TSR3Q9UJK0 312 aaKnown RBP12□□□□□ -0.49
FARP1-241ENST00000602272 TSKSQ9UJT2 592 aa12□□□□□ -0.49
FARP1-241ENST00000602272 MRC2Q9UBG0 1479 aa12□□□□□ -0.49
FARP1-241ENST00000602272 WDR62O43379 1518 aa11.98□□□□□ -0.49
FARP1-241ENST00000602272 CUX2O14529 1486 aa11.98□□□□□ -0.49
FARP1-241ENST00000602272 WBP1LQ9NX94 342 aa11.98□□□□□ -0.49
FARP1-241ENST00000602272 NBPF26B4DH59 902 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms