RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	KCNA1	Q09470	495 aa		7.69	□□□□□ -1.18
PAF1-208	ENST00000598594	DCAF8	Q5TAQ9	597 aa		7.69	□□□□□ -1.18
PAF1-208	ENST00000598594	ZNF592	Q92610	1267 aa		7.69	□□□□□ -1.18
PAF1-208	ENST00000598594	PSMD1	Q99460	953 aa		7.69	□□□□□ -1.18
PAF1-208	ENST00000598594	BCCIP	Q9P287	314 aa	Known RBP eCLIP	7.69	□□□□□ -1.18
PAF1-208	ENST00000598594	ACIN1	Q9UKV3	1341 aa	Known RBP	7.69	□□□□□ -1.18
PAF1-208	ENST00000598594	UNCX	A6NJT0	531 aa		7.68	□□□□□ -1.18
PAF1-208	ENST00000598594	SLAIN1	Q8ND83	568 aa		7.68	□□□□□ -1.18
PAF1-208	ENST00000598594	POM121	Q96HA1	1249 aa		7.68	□□□□□ -1.18
PAF1-208	ENST00000598594	ARIH1	Q9Y4X5	557 aa	Predicted RBP	7.68	□□□□□ -1.18
PAF1-208	ENST00000598594	PPP1R15A	O75807	674 aa	Predicted RBP	7.67	□□□□□ -1.18
PAF1-208	ENST00000598594	IRX5	P78411	483 aa	Predicted RBP	7.67	□□□□□ -1.18
PAF1-208	ENST00000598594	GOPC	Q9HD26	462 aa		7.67	□□□□□ -1.18
PAF1-208	ENST00000598594	IGSF5	Q9NSI5	407 aa		7.67	□□□□□ -1.18
PAF1-208	ENST00000598594	TICAM2	Q86XR7	235 aa		7.66	□□□□□ -1.18
PAF1-208	ENST00000598594	BRPF3	Q9ULD4	1205 aa		7.66	□□□□□ -1.18
PAF1-208	ENST00000598594	BRD1	O95696	1058 aa		7.65	□□□□□ -1.18
PAF1-208	ENST00000598594	CDAN1	Q8IWY9	1227 aa		7.65	□□□□□ -1.18
PAF1-208	ENST00000598594	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	7.65	□□□□□ -1.18
PAF1-208	ENST00000598594	SMARCA5	O60264	1052 aa	Predicted RBP	7.64	□□□□□ -1.19
PAF1-208	ENST00000598594	CLSTN1	O94985	981 aa		7.64	□□□□□ -1.19
PAF1-208	ENST00000598594	CC2D2B	Q6DHV5	1058 aa		7.64	□□□□□ -1.19
PAF1-208	ENST00000598594	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.64	□□□□□ -1.19
PAF1-208	ENST00000598594	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	7.63	□□□□□ -1.19
PAF1-208	ENST00000598594	OCEL1	Q9H607	264 aa		7.63	□□□□□ -1.19
PAF1-208	ENST00000598594	ST18	O60284	1047 aa		7.62	□□□□□ -1.19
PAF1-208	ENST00000598594	NEFL	P07196	543 aa		7.62	□□□□□ -1.19
PAF1-208	ENST00000598594	CADPS	Q9ULU8	1353 aa		7.61	□□□□□ -1.19
PAF1-208	ENST00000598594	SNPH	O15079	494 aa		7.61	□□□□□ -1.19
PAF1-208	ENST00000598594	KDM4A	O75164	1064 aa		7.61	□□□□□ -1.19
PAF1-208	ENST00000598594	SPATA32	Q96LK8	384 aa		7.61	□□□□□ -1.19
PAF1-208	ENST00000598594	ANKRD13A	Q8IZ07	590 aa		7.6	□□□□□ -1.19
PAF1-208	ENST00000598594	PYGB	P11216	843 aa		7.59	□□□□□ -1.19
PAF1-208	ENST00000598594	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.59	□□□□□ -1.19
PAF1-208	ENST00000598594	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	7.59	□□□□□ -1.19
PAF1-208	ENST00000598594	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.59	□□□□□ -1.19
PAF1-208	ENST00000598594	NCL	P19338	710 aa	Known RBP	7.58	□□□□□ -1.2
PAF1-208	ENST00000598594	MLLT3	P42568	568 aa	Predicted RBP	7.58	□□□□□ -1.2
PAF1-208	ENST00000598594	TMED8	Q6PL24	325 aa	Predicted RBP	7.58	□□□□□ -1.2
PAF1-208	ENST00000598594	PARP9	Q8IXQ6	854 aa		7.58	□□□□□ -1.2
PAF1-208	ENST00000598594	IVNS1ABP	Q9Y6Y0	642 aa		7.58	□□□□□ -1.2
PAF1-208	ENST00000598594	CHRM1	P11229	460 aa	Predicted RBP	7.57	□□□□□ -1.2
PAF1-208	ENST00000598594	ZNF467	Q7Z7K2	595 aa	Predicted RBP	7.57	□□□□□ -1.2
PAF1-208	ENST00000598594	DRC1	Q96MC2	740 aa		7.57	□□□□□ -1.2
PAF1-208	ENST00000598594	RBM47	A0AV96	593 aa	Known RBP	7.56	□□□□□ -1.2
PAF1-208	ENST00000598594	ZNF526	Q8TF50	670 aa	Predicted RBP	7.56	□□□□□ -1.2
PAF1-208	ENST00000598594	PCDHB8	Q9UN66	801 aa		7.55	□□□□□ -1.2
PAF1-208	ENST00000598594	COG6	Q9Y2V7	657 aa		7.54	□□□□□ -1.2
PAF1-208	ENST00000598594	GOLGA2	Q08379	1002 aa		7.53	□□□□□ -1.2
PAF1-208	ENST00000598594	AMHR2	Q16671	573 aa		7.53	□□□□□ -1.2
PAF1-208	ENST00000598594	C3orf67	Q6ZVT6	689 aa		7.53	□□□□□ -1.2
PAF1-208	ENST00000598594	MRRF	Q96E11	262 aa	Known RBP	7.53	□□□□□ -1.2
PAF1-208	ENST00000598594	KIAA1522	Q9P206	1035 aa	Predicted RBP	7.53	□□□□□ -1.2
PAF1-208	ENST00000598594	MINK1	Q8N4C8	1332 aa	Predicted RBP	7.52	□□□□□ -1.2
PAF1-208	ENST00000598594	IRX6	P78412	446 aa	Predicted RBP	7.52	□□□□□ -1.21
PAF1-208	ENST00000598594	NOL8	Q76FK4	1167 aa	Known RBP	7.52	□□□□□ -1.21
PAF1-208	ENST00000598594	PDCD7	Q8N8D1	485 aa	Known RBP	7.52	□□□□□ -1.21
PAF1-208	ENST00000598594	L3MBTL3	Q96JM7	780 aa	Predicted RBP	7.52	□□□□□ -1.21
PAF1-208	ENST00000598594	UST	Q9Y2C2	406 aa		7.52	□□□□□ -1.21
PAF1-208	ENST00000598594	CCDC102A	Q96A19	550 aa		7.51	□□□□□ -1.21
PAF1-208	ENST00000598594	CALR3	Q96L12	384 aa	Known RBP	7.51	□□□□□ -1.21
PAF1-208	ENST00000598594	BCL11A	Q9H165	835 aa		7.51	□□□□□ -1.21
PAF1-208	ENST00000598594	PRDM16	Q9HAZ2	1276 aa		7.51	□□□□□ -1.21
PAF1-208	ENST00000598594	CARNS1	A5YM72	827 aa		7.5	□□□□□ -1.21
PAF1-208	ENST00000598594	ANKRD62	A6NC57	917 aa		7.5	□□□□□ -1.21
PAF1-208	ENST00000598594	CSB-PGBD3	P0DP91	1061 aa		7.5	□□□□□ -1.21
PAF1-208	ENST00000598594	SREK1	Q8WXA9	508 aa	Known RBP	7.5	□□□□□ -1.21
PAF1-208	ENST00000598594	TSR1	Q2NL82	804 aa	Known RBP	7.49	□□□□□ -1.21
PAF1-208	ENST00000598594	LARP6	Q9BRS8	491 aa	Known RBP	7.49	□□□□□ -1.21
PAF1-208	ENST00000598594	PPP1R37	O75864	691 aa		7.48	□□□□□ -1.21
PAF1-208	ENST00000598594	PBXIP1	Q96AQ6	731 aa		7.48	□□□□□ -1.21
PAF1-208	ENST00000598594	MFRP	Q9BY79	579 aa		7.48	□□□□□ -1.21
PAF1-208	ENST00000598594	GPR37	O15354	613 aa		7.47	□□□□□ -1.21
PAF1-208	ENST00000598594	TBC1D12	O60347	775 aa		7.47	□□□□□ -1.21
PAF1-208	ENST00000598594	MMRN1	Q13201	1228 aa		7.47	□□□□□ -1.21
PAF1-208	ENST00000598594	TTLL12	Q14166	644 aa	Predicted RBP	7.47	□□□□□ -1.21
PAF1-208	ENST00000598594	SPNS2	Q8IVW8	549 aa		7.47	□□□□□ -1.21
PAF1-208	ENST00000598594	NCKAP5L	Q9HCH0	1330 aa		7.47	□□□□□ -1.21
PAF1-208	ENST00000598594	ZC3H4	Q9UPT8	1303 aa	Known RBP	7.47	□□□□□ -1.21
PAF1-208	ENST00000598594	SPDYE5	A6NIY4	337 aa		7.46	□□□□□ -1.22
PAF1-208	ENST00000598594	IRF6	O14896	467 aa		7.46	□□□□□ -1.22
PAF1-208	ENST00000598594	MARCH6	O60337	910 aa		7.46	□□□□□ -1.22
PAF1-208	ENST00000598594	PSEN1	P49768	467 aa		7.46	□□□□□ -1.22
PAF1-208	ENST00000598594	MAP2K5	Q13163	448 aa		7.46	□□□□□ -1.22
PAF1-208	ENST00000598594	SKIV2L	Q15477	1246 aa	Known RBP	7.46	□□□□□ -1.22
PAF1-208	ENST00000598594	SH3D19	Q5HYK7	790 aa		7.46	□□□□□ -1.22
PAF1-208	ENST00000598594	C8orf37	Q96NL8	207 aa		7.46	□□□□□ -1.22
PAF1-208	ENST00000598594	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.46	□□□□□ -1.22
PAF1-208	ENST00000598594	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	7.46	□□□□□ -1.22
PAF1-208	ENST00000598594	LOC102724159	A0A0B4J2E5	919 aa		7.45	□□□□□ -1.22
PAF1-208	ENST00000598594	MS4A1	P11836	297 aa		7.45	□□□□□ -1.22
PAF1-208	ENST00000598594	TCF3	P15923	654 aa		7.45	□□□□□ -1.22
PAF1-208	ENST00000598594	PWP2	Q15269	919 aa	Known RBP	7.45	□□□□□ -1.22
PAF1-208	ENST00000598594	ILDR1	Q86SU0	546 aa	Predicted RBP	7.45	□□□□□ -1.22
PAF1-208	ENST00000598594	MARVELD3	Q96A59	401 aa		7.45	□□□□□ -1.22
PAF1-208	ENST00000598594	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.45	□□□□□ -1.22
PAF1-208	ENST00000598594	ATP1B4	Q9UN42	357 aa	Predicted RBP	7.45	□□□□□ -1.22
PAF1-208	ENST00000598594	PLEKHD1	A6NEE1	506 aa		7.44	□□□□□ -1.22
PAF1-208	ENST00000598594	EMP3	P54852	163 aa		7.44	□□□□□ -1.22
PAF1-208	ENST00000598594	PDAP1	Q13442	181 aa	Known RBP	7.44	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms