RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 POTEB3A0JP26 581 aa8.04□□□□□ -1.12
VMP1-212ENST00000591782 GPR37O15354 613 aa8.04□□□□□ -1.12
VMP1-212ENST00000591782 POTEBQ6S5H4 581 aa8.04□□□□□ -1.12
VMP1-212ENST00000591782 HS3ST6Q96QI5 342 aa8.04□□□□□ -1.12
VMP1-212ENST00000591782 BCL2L12Q9HB09 334 aa8.04□□□□□ -1.12
VMP1-212ENST00000591782 PTGDRQ13258 359 aa8.02□□□□□ -1.13
VMP1-212ENST00000591782 NPDC1Q9NQX5 325 aaPredicted RBP8.02□□□□□ -1.13
VMP1-212ENST00000591782 PTPREP23469 700 aa8.01□□□□□ -1.13
VMP1-212ENST00000591782 POTEEQ6S8J3 1075 aa8.01□□□□□ -1.13
VMP1-212ENST00000591782 FCHSD2O94868 740 aa8□□□□□ -1.13
VMP1-212ENST00000591782 COL9A1P20849 921 aa8□□□□□ -1.13
VMP1-212ENST00000591782 ZNF687Q8N1G0 1237 aa8□□□□□ -1.13
VMP1-212ENST00000591782 KCNK17Q96T54 332 aa8□□□□□ -1.13
VMP1-212ENST00000591782 ZMYND10O75800 440 aa7.99□□□□□ -1.13
VMP1-212ENST00000591782 AXIN2Q9Y2T1 843 aa7.99□□□□□ -1.13
VMP1-212ENST00000591782 FECHP22830 423 aa7.98□□□□□ -1.13
VMP1-212ENST00000591782 PSEN2P49810 448 aa7.98□□□□□ -1.13
VMP1-212ENST00000591782 HIC1Q14526 733 aa7.98□□□□□ -1.13
VMP1-212ENST00000591782 PPP1R3GB7ZBB8 358 aa7.97□□□□□ -1.13
VMP1-212ENST00000591782 ARHGAP33O14559 1287 aa7.97□□□□□ -1.13
VMP1-212ENST00000591782 GNPATO15228 680 aa7.97□□□□□ -1.13
VMP1-212ENST00000591782 CERKQ8TCT0 537 aa7.97□□□□□ -1.13
VMP1-212ENST00000591782 KCNH8Q96L42 1107 aa7.97□□□□□ -1.13
VMP1-212ENST00000591782 BARGINQ6ZT62 677 aa7.96□□□□□ -1.14
VMP1-212ENST00000591782 PBX2P40425 430 aa7.94□□□□□ -1.14
VMP1-212ENST00000591782 PRSS12P56730 875 aa7.94□□□□□ -1.14
VMP1-212ENST00000591782 DMRTA1Q5VZB9 504 aa7.94□□□□□ -1.14
VMP1-212ENST00000591782 POTEGQ6S5H5 508 aa7.94□□□□□ -1.14
VMP1-212ENST00000591782 PADI6Q6TGC4 694 aa7.94□□□□□ -1.14
VMP1-212ENST00000591782 CDCA7LQ96GN5 454 aa7.94□□□□□ -1.14
VMP1-212ENST00000591782 SLC24A3Q9HC58 644 aa7.94□□□□□ -1.14
VMP1-212ENST00000591782 POTEMA6NI47 508 aa7.93□□□□□ -1.14
VMP1-212ENST00000591782 PROX2Q3B8N5 592 aa7.93□□□□□ -1.14
VMP1-212ENST00000591782 MAP2K5Q13163 448 aa7.92□□□□□ -1.14
VMP1-212ENST00000591782 KRI1Q8N9T8 703 aaKnown RBP7.92□□□□□ -1.14
VMP1-212ENST00000591782 ZBED2Q9BTP6 218 aa7.92□□□□□ -1.14
VMP1-212ENST00000591782 RBM27Q9P2N5 1060 aaKnown RBP7.92□□□□□ -1.14
VMP1-212ENST00000591782 TTC13Q8NBP0 860 aa7.91□□□□□ -1.14
VMP1-212ENST00000591782 FAM198AQ9UFP1 575 aa7.91□□□□□ -1.14
VMP1-212ENST00000591782 TSKSQ9UJT2 592 aa7.91□□□□□ -1.14
VMP1-212ENST00000591782 TRIM6-TRIM34B2RNG4 842 aa7.9□□□□□ -1.14
VMP1-212ENST00000591782 MINK1Q8N4C8 1332 aaPredicted RBP7.89□□□□□ -1.15
VMP1-212ENST00000591782 IRF6O14896 467 aa7.89□□□□□ -1.15
VMP1-212ENST00000591782 FAM161AQ3B820 660 aa7.89□□□□□ -1.15
VMP1-212ENST00000591782 LSM11P83369 360 aaKnown RBP eCLIP7.88□□□□□ -1.15
VMP1-212ENST00000591782 CCDC102AQ96A19 550 aa7.88□□□□□ -1.15
VMP1-212ENST00000591782 SLC4A5Q9BY07 1137 aa7.88□□□□□ -1.15
VMP1-212ENST00000591782 KRTAP3-3Q9BYR6 98 aa7.88□□□□□ -1.15
VMP1-212ENST00000591782 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
VMP1-212ENST00000591782 C3orf80F5H4A9 247 aa7.87□□□□□ -1.15
VMP1-212ENST00000591782 CDAN1Q8IWY9 1227 aa7.87□□□□□ -1.15
VMP1-212ENST00000591782 VPS9D1Q9Y2B5 631 aa7.87□□□□□ -1.15
VMP1-212ENST00000591782 ONECUT3O60422 494 aaPredicted RBP7.86□□□□□ -1.15
VMP1-212ENST00000591782 ANKRD13DQ6ZTN6 518 aa7.86□□□□□ -1.15
VMP1-212ENST00000591782 PACS2Q86VP3 889 aa7.86□□□□□ -1.15
VMP1-212ENST00000591782 AK7Q96M32 723 aa7.86□□□□□ -1.15
VMP1-212ENST00000591782 KIAA1468Q9P260 1216 aa7.86□□□□□ -1.15
VMP1-212ENST00000591782 ADGRG1Q9Y653 693 aa7.86□□□□□ -1.15
VMP1-212ENST00000591782 ADGRD1Q6QNK2 874 aa7.85□□□□□ -1.15
VMP1-212ENST00000591782 NUDT18Q6ZVK8 323 aa7.85□□□□□ -1.15
VMP1-212ENST00000591782 RABGEF1Q9UJ41 708 aa7.85□□□□□ -1.15
VMP1-212ENST00000591782 PNMA3Q9UL41 463 aa7.85□□□□□ -1.15
VMP1-212ENST00000591782 NBPF26B4DH59 902 aa7.84□□□□□ -1.15
VMP1-212ENST00000591782 TK2O00142 265 aa7.84□□□□□ -1.15
VMP1-212ENST00000591782 SMAPO00193 183 aa7.84□□□□□ -1.15
VMP1-212ENST00000591782 TATDN2Q93075 761 aa7.84□□□□□ -1.15
VMP1-212ENST00000591782 TRIM66O15016 1216 aa7.83□□□□□ -1.16
VMP1-212ENST00000591782 OATP04181 439 aa7.83□□□□□ -1.16
VMP1-212ENST00000591782 METTL3Q86U44 580 aaKnown RBP7.83□□□□□ -1.16
VMP1-212ENST00000591782 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
VMP1-212ENST00000591782 PXYLP1Q8TE99 480 aa7.83□□□□□ -1.16
VMP1-212ENST00000591782 PHOX2BQ99453 314 aa7.83□□□□□ -1.16
VMP1-212ENST00000591782 EYA1Q99502 592 aa7.82□□□□□ -1.16
VMP1-212ENST00000591782 SEPT9Q9UHD8 586 aaPredicted RBP7.82□□□□□ -1.16
VMP1-212ENST00000591782 BHMG1C9JSJ3 638 aaPredicted RBP7.81□□□□□ -1.16
VMP1-212ENST00000591782 HRO43593 1189 aa7.81□□□□□ -1.16
VMP1-212ENST00000591782 NLRP7Q8WX94 980 aa7.8□□□□□ -1.16
VMP1-212ENST00000591782 PDE4DQ08499 809 aa7.79□□□□□ -1.16
VMP1-212ENST00000591782 AMHR2Q16671 573 aa7.79□□□□□ -1.16
VMP1-212ENST00000591782 NBPF3Q9H094 633 aa7.79□□□□□ -1.16
VMP1-212ENST00000591782 RCCD1A6NED2 376 aa7.78□□□□□ -1.16
VMP1-212ENST00000591782 MRPL50Q8N5N7 158 aaKnown RBP7.78□□□□□ -1.16
VMP1-212ENST00000591782 DNAJB2P25686 324 aa7.77□□□□□ -1.17
VMP1-212ENST00000591782 FAM98CQ17RN3 349 aaKnown RBP7.77□□□□□ -1.17
VMP1-212ENST00000591782 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.76□□□□□ -1.17
VMP1-212ENST00000591782 BRPF1P55201 1214 aaPredicted RBP7.76□□□□□ -1.17
VMP1-212ENST00000591782 MDM2Q00987 491 aaPredicted RBP7.76□□□□□ -1.17
VMP1-212ENST00000591782 TTLL12Q14166 644 aaPredicted RBP7.76□□□□□ -1.17
VMP1-212ENST00000591782 LAPTM4BQ86VI4 370 aa7.76□□□□□ -1.17
VMP1-212ENST00000591782 NEUROD2Q15784 382 aa7.75□□□□□ -1.17
VMP1-212ENST00000591782 PARP9Q8IXQ6 854 aa7.75□□□□□ -1.17
VMP1-212ENST00000591782 STAC3Q96MF2 364 aa7.75□□□□□ -1.17
VMP1-212ENST00000591782 REPIN1Q9BWE0 567 aaKnown RBP7.75□□□□□ -1.17
VMP1-212ENST00000591782 TMEM134Q9H6X4 195 aa7.75□□□□□ -1.17
VMP1-212ENST00000591782 GPBP1L1Q9HC44 474 aaPredicted RBP7.75□□□□□ -1.17
VMP1-212ENST00000591782 CLCN1P35523 988 aa7.74□□□□□ -1.17
VMP1-212ENST00000591782 ZFRQ96KR1 1074 aaKnown RBP7.74□□□□□ -1.17
VMP1-212ENST00000591782 GPCPD1Q9NPB8 672 aa7.74□□□□□ -1.17
VMP1-212ENST00000591782 SWT1Q5T5J6 900 aaKnown RBP7.73□□□□□ -1.17
VMP1-212ENST00000591782 TMUB1Q9BVT8 246 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms