RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 AAMPQ13685 434 aa7.89□□□□□ -1.15
LINC01538-201ENST00000588074 SH3D19Q5HYK7 790 aa7.89□□□□□ -1.15
LINC01538-201ENST00000588074 UNCXA6NJT0 531 aa7.89□□□□□ -1.15
LINC01538-201ENST00000588074 SNRKQ9NRH2 765 aa7.89□□□□□ -1.15
LINC01538-201ENST00000588074 PPP1R15BQ5SWA1 713 aa7.88□□□□□ -1.15
LINC01538-201ENST00000588074 FBXO31Q5XUX0 539 aaPredicted RBP7.88□□□□□ -1.15
LINC01538-201ENST00000588074 SPDYE1Q8NFV5 336 aaPredicted RBP7.88□□□□□ -1.15
LINC01538-201ENST00000588074 GNPATO15228 680 aa7.88□□□□□ -1.15
LINC01538-201ENST00000588074 HMGB1P09429 215 aaKnown RBP7.87□□□□□ -1.15
LINC01538-201ENST00000588074 GRXCR2A6NFK2 248 aa7.87□□□□□ -1.15
LINC01538-201ENST00000588074 IFNL1Q8IU54 200 aa7.87□□□□□ -1.15
LINC01538-201ENST00000588074 ZNF579Q8NAF0 562 aaKnown RBP7.86□□□□□ -1.15
LINC01538-201ENST00000588074 POM121CA8CG34 1229 aa7.85□□□□□ -1.15
LINC01538-201ENST00000588074 POLR3EQ9NVU0 708 aa7.84□□□□□ -1.15
LINC01538-201ENST00000588074 FAM177A1Q8N128 213 aaPredicted RBP7.84□□□□□ -1.15
LINC01538-201ENST00000588074 FANCIQ9NVI1 1328 aa7.83□□□□□ -1.16
LINC01538-201ENST00000588074 ZNF326Q5BKZ1 582 aaKnown RBP7.83□□□□□ -1.16
LINC01538-201ENST00000588074 CCDC61Q9Y6R9 512 aa7.83□□□□□ -1.16
LINC01538-201ENST00000588074 PPP1R15AO75807 674 aaPredicted RBP7.82□□□□□ -1.16
LINC01538-201ENST00000588074 CCDC27Q2M243 656 aa7.82□□□□□ -1.16
LINC01538-201ENST00000588074 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.82□□□□□ -1.16
LINC01538-201ENST00000588074 SPDYE5A6NIY4 337 aa7.82□□□□□ -1.16
LINC01538-201ENST00000588074 SKIV2LQ15477 1246 aaKnown RBP7.82□□□□□ -1.16
LINC01538-201ENST00000588074 GDPD2Q9HCC8 539 aa7.82□□□□□ -1.16
LINC01538-201ENST00000588074 IVNS1ABPQ9Y6Y0 642 aa7.82□□□□□ -1.16
LINC01538-201ENST00000588074 RBM10P98175 930 aaKnown RBP7.81□□□□□ -1.16
LINC01538-201ENST00000588074 ATP1B4Q9UN42 357 aaPredicted RBP7.81□□□□□ -1.16
LINC01538-201ENST00000588074 RBM19Q9Y4C8 960 aaKnown RBP7.81□□□□□ -1.16
LINC01538-201ENST00000588074 SPDYE16A6NNV3 312 aaPredicted RBP7.81□□□□□ -1.16
LINC01538-201ENST00000588074 BRD1O95696 1058 aa7.81□□□□□ -1.16
LINC01538-201ENST00000588074 BRD2P25440 801 aaKnown RBP7.81□□□□□ -1.16
LINC01538-201ENST00000588074 PRIM1P49642 420 aaKnown RBP7.81□□□□□ -1.16
LINC01538-201ENST00000588074 CALR3Q96L12 384 aaKnown RBP7.81□□□□□ -1.16
LINC01538-201ENST00000588074 AMOTL2Q9Y2J4 779 aa7.81□□□□□ -1.16
LINC01538-201ENST00000588074 OSBPP22059 807 aa7.8□□□□□ -1.16
LINC01538-201ENST00000588074 KCNA1Q09470 495 aa7.8□□□□□ -1.16
LINC01538-201ENST00000588074 HIC1Q14526 733 aa7.8□□□□□ -1.16
LINC01538-201ENST00000588074 GLMNQ92990 594 aa7.8□□□□□ -1.16
LINC01538-201ENST00000588074 DSG2Q14126 1118 aa7.8□□□□□ -1.16
LINC01538-201ENST00000588074 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.8□□□□□ -1.16
LINC01538-201ENST00000588074 A0A0U1RQG5 324 aaPredicted RBP7.79□□□□□ -1.16
LINC01538-201ENST00000588074 RFX1P22670 979 aa7.79□□□□□ -1.16
LINC01538-201ENST00000588074 PHOX2BQ99453 314 aa7.79□□□□□ -1.16
LINC01538-201ENST00000588074 IGSF5Q9NSI5 407 aa7.79□□□□□ -1.16
LINC01538-201ENST00000588074 RSPH4AQ5TD94 716 aa7.79□□□□□ -1.16
LINC01538-201ENST00000588074 TMUB1Q9BVT8 246 aa7.79□□□□□ -1.16
LINC01538-201ENST00000588074 GPHNQ9NQX3 736 aaPredicted RBP7.79□□□□□ -1.16
LINC01538-201ENST00000588074 CHADLQ6NUI6 762 aa7.77□□□□□ -1.17
LINC01538-201ENST00000588074 SND1Q7KZF4 910 aaKnown RBP eCLIP7.77□□□□□ -1.17
LINC01538-201ENST00000588074 MTMR14Q8NCE2 650 aa7.77□□□□□ -1.17
LINC01538-201ENST00000588074 FCHSD2O94868 740 aa7.76□□□□□ -1.17
LINC01538-201ENST00000588074 MDM2Q00987 491 aaPredicted RBP7.76□□□□□ -1.17
LINC01538-201ENST00000588074 BEGAINQ9BUH8 593 aa7.76□□□□□ -1.17
LINC01538-201ENST00000588074 MAP3K13O43283 966 aa7.75□□□□□ -1.17
LINC01538-201ENST00000588074 RFC5P40937 340 aa7.75□□□□□ -1.17
LINC01538-201ENST00000588074 ADAMTS19Q8TE59 1207 aa7.75□□□□□ -1.17
LINC01538-201ENST00000588074 NLRP7Q8WX94 980 aa7.75□□□□□ -1.17
LINC01538-201ENST00000588074 PBXIP1Q96AQ6 731 aa7.74□□□□□ -1.17
LINC01538-201ENST00000588074 SSTR3P32745 418 aaPredicted RBP7.74□□□□□ -1.17
LINC01538-201ENST00000588074 SRPK2P78362 688 aaKnown RBP7.74□□□□□ -1.17
LINC01538-201ENST00000588074 MYSM1Q5VVJ2 828 aa7.74□□□□□ -1.17
LINC01538-201ENST00000588074 ABL2P42684 1182 aa7.73□□□□□ -1.17
LINC01538-201ENST00000588074 PTGDRQ13258 359 aa7.73□□□□□ -1.17
LINC01538-201ENST00000588074 CCER1Q8TC90 406 aaPredicted RBP7.73□□□□□ -1.17
LINC01538-201ENST00000588074 KIAA1522Q9P206 1035 aaPredicted RBP7.73□□□□□ -1.17
LINC01538-201ENST00000588074 DDX12PQ92771 950 aa7.73□□□□□ -1.17
LINC01538-201ENST00000588074 TBC1D12O60347 775 aa7.72□□□□□ -1.17
LINC01538-201ENST00000588074 CFAP70Q5T0N1 1121 aa7.72□□□□□ -1.17
LINC01538-201ENST00000588074 YTHDC1Q96MU7 727 aaKnown RBP7.72□□□□□ -1.17
LINC01538-201ENST00000588074 TBC1D2BQ9UPU7 963 aa7.72□□□□□ -1.17
LINC01538-201ENST00000588074 PATL2C9JE40 543 aaKnown RBP7.72□□□□□ -1.17
LINC01538-201ENST00000588074 USTQ9Y2C2 406 aa7.71□□□□□ -1.17
LINC01538-201ENST00000588074 C11orf95C9JLR9 678 aaPredicted RBP7.71□□□□□ -1.18
LINC01538-201ENST00000588074 GPCPD1Q9NPB8 672 aa7.71□□□□□ -1.18
LINC01538-201ENST00000588074 CLK2P49760 499 aaKnown RBP7.69□□□□□ -1.18
LINC01538-201ENST00000588074 REM2Q8IYK8 340 aaPredicted RBP7.69□□□□□ -1.18
LINC01538-201ENST00000588074 CSB-PGBD3P0DP91 1061 aa7.69□□□□□ -1.18
LINC01538-201ENST00000588074 CLCN1P35523 988 aa7.69□□□□□ -1.18
LINC01538-201ENST00000588074 BANK1Q8NDB2 785 aa7.68□□□□□ -1.18
LINC01538-201ENST00000588074 DHX37Q8IY37 1157 aaKnown RBP7.68□□□□□ -1.18
LINC01538-201ENST00000588074 NAP1L5Q96NT1 182 aaPredicted RBP7.68□□□□□ -1.18
LINC01538-201ENST00000588074 LIMD1Q9UGP4 676 aa7.68□□□□□ -1.18
LINC01538-201ENST00000588074 TMEM88BA6NKF7 163 aa7.67□□□□□ -1.18
LINC01538-201ENST00000588074 FAM161AQ3B820 660 aa7.67□□□□□ -1.18
LINC01538-201ENST00000588074 CDHR5Q9HBB8 845 aa7.67□□□□□ -1.18
LINC01538-201ENST00000588074 TXNDC2Q86VQ3 553 aa7.67□□□□□ -1.18
LINC01538-201ENST00000588074 RBM47A0AV96 593 aaKnown RBP7.66□□□□□ -1.18
LINC01538-201ENST00000588074 HDGFL1Q5TGJ6 251 aa7.66□□□□□ -1.18
LINC01538-201ENST00000588074 CCDC125Q86Z20 511 aa7.66□□□□□ -1.18
LINC01538-201ENST00000588074 MRRFQ96E11 262 aaKnown RBP7.66□□□□□ -1.18
LINC01538-201ENST00000588074 KIF12Q96FN5 646 aa7.66□□□□□ -1.18
LINC01538-201ENST00000588074 FAM217BQ9NTX9 383 aaPredicted RBP7.66□□□□□ -1.18
LINC01538-201ENST00000588074 AKT1S1Q96B36 256 aa7.66□□□□□ -1.18
LINC01538-201ENST00000588074 FOXK1P85037 733 aa7.64□□□□□ -1.19
LINC01538-201ENST00000588074 CDCA8Q53HL2 280 aa7.64□□□□□ -1.19
LINC01538-201ENST00000588074 NOM1Q5C9Z4 860 aaKnown RBP7.64□□□□□ -1.19
LINC01538-201ENST00000588074 UPF1Q92900 1129 aaKnown RBP eCLIP7.64□□□□□ -1.19
LINC01538-201ENST00000588074 PITPNM1O00562 1244 aa7.64□□□□□ -1.19
LINC01538-201ENST00000588074 PPM1GO15355 546 aaPredicted RBP7.64□□□□□ -1.19
LINC01538-201ENST00000588074 VRTNQ9H8Y1 702 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms