RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 PROX2Q3B8N5 592 aa12.86□□□□□ -0.35
RPRD1A-203ENST00000585879 DPYSL4O14531 572 aa12.8□□□□□ -0.36
RPRD1A-203ENST00000585879 EPAS1Q99814 870 aa12.8□□□□□ -0.36
RPRD1A-203ENST00000585879 RGS20O76081 388 aa12.78□□□□□ -0.36
RPRD1A-203ENST00000585879 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
RPRD1A-203ENST00000585879 LAPTM4BQ86VI4 370 aa12.78□□□□□ -0.36
RPRD1A-203ENST00000585879 A0A0G2JS52 829 aa12.77□□□□□ -0.37
RPRD1A-203ENST00000585879 ONECUT3O60422 494 aaPredicted RBP12.77□□□□□ -0.37
RPRD1A-203ENST00000585879 ANKK1Q8NFD2 765 aa12.77□□□□□ -0.37
RPRD1A-203ENST00000585879 KIAA1468Q9P260 1216 aa12.76□□□□□ -0.37
RPRD1A-203ENST00000585879 BBXQ8WY36 941 aaPredicted RBP12.75□□□□□ -0.37
RPRD1A-203ENST00000585879 SOWAHBA6NEL2 793 aa12.73□□□□□ -0.37
RPRD1A-203ENST00000585879 BCAMP50895 628 aa12.72□□□□□ -0.37
RPRD1A-203ENST00000585879 ZFRQ96KR1 1074 aaKnown RBP12.72□□□□□ -0.37
RPRD1A-203ENST00000585879 ITGBL1O95965 494 aaPredicted RBP12.71□□□□□ -0.37
RPRD1A-203ENST00000585879 TRIM6-TRIM34B2RNG4 842 aa12.7□□□□□ -0.38
RPRD1A-203ENST00000585879 DDX12PQ92771 950 aa12.7□□□□□ -0.38
RPRD1A-203ENST00000585879 SEPT9Q9UHD8 586 aaPredicted RBP12.69□□□□□ -0.38
RPRD1A-203ENST00000585879 PDIA6Q15084 440 aa12.68□□□□□ -0.38
RPRD1A-203ENST00000585879 RBM33Q96EV2 1170 aaKnown RBP12.68□□□□□ -0.38
RPRD1A-203ENST00000585879 NYAP1Q6ZVC0 841 aa12.67□□□□□ -0.38
RPRD1A-203ENST00000585879 EN1Q05925 392 aaPredicted RBP12.65□□□□□ -0.38
RPRD1A-203ENST00000585879 FAM98CQ17RN3 349 aaKnown RBP12.65□□□□□ -0.38
RPRD1A-203ENST00000585879 WBP1LQ9NX94 342 aa12.64□□□□□ -0.39
RPRD1A-203ENST00000585879 NBR1Q14596 966 aa12.62□□□□□ -0.39
RPRD1A-203ENST00000585879 TSR1Q2NL82 804 aaKnown RBP12.62□□□□□ -0.39
RPRD1A-203ENST00000585879 SPDYE16A6NNV3 312 aaPredicted RBP12.61□□□□□ -0.39
RPRD1A-203ENST00000585879 TSKSQ9UJT2 592 aa12.61□□□□□ -0.39
RPRD1A-203ENST00000585879 SPRYD3Q8NCJ5 442 aa12.6□□□□□ -0.39
RPRD1A-203ENST00000585879 IRX2Q9BZI1 471 aaPredicted RBP12.6□□□□□ -0.39
RPRD1A-203ENST00000585879 MAP3K7O43318 606 aa12.59□□□□□ -0.39
RPRD1A-203ENST00000585879 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.4
RPRD1A-203ENST00000585879 TSR3Q9UJK0 312 aaKnown RBP12.58□□□□□ -0.4
RPRD1A-203ENST00000585879 ARIH1Q9Y4X5 557 aaPredicted RBP12.58□□□□□ -0.4
RPRD1A-203ENST00000585879 PACS2Q86VP3 889 aa12.56□□□□□ -0.4
RPRD1A-203ENST00000585879 LRCH3Q96II8 777 aa12.56□□□□□ -0.4
RPRD1A-203ENST00000585879 KCNC4Q03721 635 aa12.55□□□□□ -0.4
RPRD1A-203ENST00000585879 E2F4Q16254 413 aa12.55□□□□□ -0.4
RPRD1A-203ENST00000585879 HPS5Q9UPZ3 1129 aa12.55□□□□□ -0.4
RPRD1A-203ENST00000585879 PRIM1P49642 420 aaKnown RBP12.54□□□□□ -0.4
RPRD1A-203ENST00000585879 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.53□□□□□ -0.4
RPRD1A-203ENST00000585879 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.41
RPRD1A-203ENST00000585879 FAM198AQ9UFP1 575 aa12.52□□□□□ -0.41
RPRD1A-203ENST00000585879 PRSS12P56730 875 aa12.51□□□□□ -0.41
RPRD1A-203ENST00000585879 CERKQ8TCT0 537 aa12.49□□□□□ -0.41
RPRD1A-203ENST00000585879 C3orf80F5H4A9 247 aa12.48□□□□□ -0.41
RPRD1A-203ENST00000585879 SMAPO00193 183 aa12.47□□□□□ -0.41
RPRD1A-203ENST00000585879 GRXCR2A6NFK2 248 aa12.46□□□□□ -0.41
RPRD1A-203ENST00000585879 OSBPP22059 807 aa12.45□□□□□ -0.42
RPRD1A-203ENST00000585879 PPP4CP60510 307 aa12.45□□□□□ -0.42
RPRD1A-203ENST00000585879 SAMD7Q7Z3H4 446 aa12.45□□□□□ -0.42
RPRD1A-203ENST00000585879 WDR70Q9NW82 654 aa12.44□□□□□ -0.42
RPRD1A-203ENST00000585879 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
RPRD1A-203ENST00000585879 PAXIP1Q6ZW49 1069 aaPredicted RBP12.43□□□□□ -0.42
RPRD1A-203ENST00000585879 TATDN2Q93075 761 aa12.43□□□□□ -0.42
RPRD1A-203ENST00000585879 CDHR5Q9HBB8 845 aa12.43□□□□□ -0.42
RPRD1A-203ENST00000585879 NBPF26B4DH59 902 aa12.42□□□□□ -0.42
RPRD1A-203ENST00000585879 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
RPRD1A-203ENST00000585879 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
RPRD1A-203ENST00000585879 PNMA3Q9UL41 463 aa12.42□□□□□ -0.42
RPRD1A-203ENST00000585879 TJAP1Q5JTD0 557 aa12.41□□□□□ -0.42
RPRD1A-203ENST00000585879 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
RPRD1A-203ENST00000585879 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
RPRD1A-203ENST00000585879 TTC13Q8NBP0 860 aa12.36□□□□□ -0.43
RPRD1A-203ENST00000585879 MTRQ99707 1265 aa12.35□□□□□ -0.43
RPRD1A-203ENST00000585879 NPDC1Q9NQX5 325 aaPredicted RBP12.35□□□□□ -0.43
RPRD1A-203ENST00000585879 IL21Q9HBE4 155 aa12.33□□□□□ -0.44
RPRD1A-203ENST00000585879 Q6ZNB5 142 aa12.32□□□□□ -0.44
RPRD1A-203ENST00000585879 APLP1P51693 650 aa12.3□□□□□ -0.44
RPRD1A-203ENST00000585879 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
RPRD1A-203ENST00000585879 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
RPRD1A-203ENST00000585879 LAPTM4AQ15012 233 aa12.28□□□□□ -0.44
RPRD1A-203ENST00000585879 PPP1R18Q6NYC8 613 aa12.28□□□□□ -0.44
RPRD1A-203ENST00000585879 ZNF516Q92618 1163 aa12.28□□□□□ -0.44
RPRD1A-203ENST00000585879 RNF40O75150 1001 aa12.27□□□□□ -0.45
RPRD1A-203ENST00000585879 SWT1Q5T5J6 900 aaKnown RBP12.26□□□□□ -0.45
RPRD1A-203ENST00000585879 PRKD2Q9BZL6 878 aa12.25□□□□□ -0.45
RPRD1A-203ENST00000585879 LCE2BO14633 110 aa12.24□□□□□ -0.45
RPRD1A-203ENST00000585879 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
RPRD1A-203ENST00000585879 EYA1Q99502 592 aa12.24□□□□□ -0.45
RPRD1A-203ENST00000585879 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
RPRD1A-203ENST00000585879 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.22□□□□□ -0.45
RPRD1A-203ENST00000585879 V9GY48 417 aaPredicted RBP12.22□□□□□ -0.45
RPRD1A-203ENST00000585879 GFRA3O60609 400 aa12.21□□□□□ -0.45
RPRD1A-203ENST00000585879 MLLT3P42568 568 aaPredicted RBP12.21□□□□□ -0.45
RPRD1A-203ENST00000585879 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.45
RPRD1A-203ENST00000585879 NKX2-3Q8TAU0 364 aa12.2□□□□□ -0.46
RPRD1A-203ENST00000585879 KCNV2Q8TDN2 545 aa12.17□□□□□ -0.46
RPRD1A-203ENST00000585879 NRG2O14511 850 aaPredicted RBP12.16□□□□□ -0.46
RPRD1A-203ENST00000585879 COPS2P61201 443 aa12.16□□□□□ -0.46
RPRD1A-203ENST00000585879 TSHZ2Q9NRE2 1034 aa12.16□□□□□ -0.46
RPRD1A-203ENST00000585879 PTGDRQ13258 359 aa12.15□□□□□ -0.46
RPRD1A-203ENST00000585879 TRAF7Q6Q0C0 670 aa12.15□□□□□ -0.46
RPRD1A-203ENST00000585879 ZPR1O75312 459 aa12.13□□□□□ -0.47
RPRD1A-203ENST00000585879 SLC4A3P48751 1232 aa12.13□□□□□ -0.47
RPRD1A-203ENST00000585879 TMUB1Q9BVT8 246 aa12.12□□□□□ -0.47
RPRD1A-203ENST00000585879 PRR14Q9BWN1 585 aa12.12□□□□□ -0.47
RPRD1A-203ENST00000585879 DNAJB2P25686 324 aa12.11□□□□□ -0.47
RPRD1A-203ENST00000585879 GGCXP38435 758 aa12.11□□□□□ -0.47
RPRD1A-203ENST00000585879 TMEM134Q9H6X4 195 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms