RNA–Protein interactions for RNA: ENST00000584261.5

DDX42-218, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 510 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-218ENST00000584261 ADAM33Q9BZ11 813 aa11□□□□□ -0.65
DDX42-218ENST00000584261 ERCC6Q03468 1493 aa11□□□□□ -0.65
DDX42-218ENST00000584261 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
DDX42-218ENST00000584261 NBPF3Q9H094 633 aa10.99□□□□□ -0.65
DDX42-218ENST00000584261 ANO8Q9HCE9 1232 aaPredicted RBP10.99□□□□□ -0.65
DDX42-218ENST00000584261 CADPSQ9ULU8 1353 aa10.99□□□□□ -0.65
DDX42-218ENST00000584261 SUPT5HO00267 1087 aaKnown RBP10.97□□□□□ -0.65
DDX42-218ENST00000584261 PPP1R15BQ5SWA1 713 aa10.97□□□□□ -0.65
DDX42-218ENST00000584261 Q6ZNB5 142 aa10.97□□□□□ -0.65
DDX42-218ENST00000584261 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
DDX42-218ENST00000584261 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
DDX42-218ENST00000584261 JPH4Q96JJ6 628 aa10.97□□□□□ -0.65
DDX42-218ENST00000584261 CRISPLD2Q9H0B8 497 aa10.97□□□□□ -0.65
DDX42-218ENST00000584261 ITGBL1O95965 494 aaPredicted RBP10.95□□□□□ -0.66
DDX42-218ENST00000584261 PDS5BQ9NTI5 1447 aa10.94□□□□□ -0.66
DDX42-218ENST00000584261 EVI5O60447 810 aa10.94□□□□□ -0.66
DDX42-218ENST00000584261 LAMC3Q9Y6N6 1575 aa10.93□□□□□ -0.66
DDX42-218ENST00000584261 ANKK1Q8NFD2 765 aa10.91□□□□□ -0.66
DDX42-218ENST00000584261 CCDC88BA6NC98 1476 aa10.91□□□□□ -0.66
DDX42-218ENST00000584261 BCAMP50895 628 aa10.9□□□□□ -0.66
DDX42-218ENST00000584261 PROX2Q3B8N5 592 aa10.9□□□□□ -0.66
DDX42-218ENST00000584261 RABGEF1Q9UJ41 708 aa10.9□□□□□ -0.66
DDX42-218ENST00000584261 CFTRP13569 1480 aa10.89□□□□□ -0.67
DDX42-218ENST00000584261 NCKAP5LQ9HCH0 1330 aa10.88□□□□□ -0.67
DDX42-218ENST00000584261 NKX1-1Q15270 411 aaPredicted RBP10.88□□□□□ -0.67
DDX42-218ENST00000584261 PPP1R3GB7ZBB8 358 aa10.87□□□□□ -0.67
DDX42-218ENST00000584261 CHGAP10645 457 aaKnown RBP10.87□□□□□ -0.67
DDX42-218ENST00000584261 COL9A1P20849 921 aa10.86□□□□□ -0.67
DDX42-218ENST00000584261 PDE4AP27815 886 aa10.86□□□□□ -0.67
DDX42-218ENST00000584261 SOWAHBA6NEL2 793 aa10.85□□□□□ -0.67
DDX42-218ENST00000584261 PCDHGA10Q9Y5H3 936 aa10.84□□□□□ -0.67
DDX42-218ENST00000584261 CUX2O14529 1486 aa10.84□□□□□ -0.67
DDX42-218ENST00000584261 FANCD2Q9BXW9 1451 aa10.83□□□□□ -0.68
DDX42-218ENST00000584261 MAP3K9P80192 1104 aa10.83□□□□□ -0.68
DDX42-218ENST00000584261 KCNC4Q03721 635 aa10.83□□□□□ -0.68
DDX42-218ENST00000584261 WBP1LQ9NX94 342 aa10.83□□□□□ -0.68
DDX42-218ENST00000584261 LAPTM4BQ86VI4 370 aa10.82□□□□□ -0.68
DDX42-218ENST00000584261 LCE2BO14633 110 aa10.81□□□□□ -0.68
DDX42-218ENST00000584261 NYAP1Q6ZVC0 841 aa10.81□□□□□ -0.68
DDX42-218ENST00000584261 ZFRQ96KR1 1074 aaKnown RBP10.81□□□□□ -0.68
DDX42-218ENST00000584261 KIAA1468Q9P260 1216 aa10.81□□□□□ -0.68
DDX42-218ENST00000584261 CEP164Q9UPV0 1460 aa10.81□□□□□ -0.68
DDX42-218ENST00000584261 LARP6Q9BRS8 491 aaKnown RBP10.8□□□□□ -0.68
DDX42-218ENST00000584261 MRC2Q9UBG0 1479 aa10.8□□□□□ -0.68
DDX42-218ENST00000584261 DNAJC5Q9H3Z4 198 aa10.79□□□□□ -0.68
DDX42-218ENST00000584261 RYDENQ9NUL5 291 aaKnown RBP10.79□□□□□ -0.68
DDX42-218ENST00000584261 LAPTM4AQ15012 233 aa10.77□□□□□ -0.69
DDX42-218ENST00000584261 DDX27Q96GQ7 796 aaKnown RBP10.77□□□□□ -0.69
DDX42-218ENST00000584261 KIF21AQ7Z4S6 1674 aa10.76□□□□□ -0.69
DDX42-218ENST00000584261 GFRA3O60609 400 aa10.76□□□□□ -0.69
DDX42-218ENST00000584261 TRAF7Q6Q0C0 670 aa10.76□□□□□ -0.69
DDX42-218ENST00000584261 EMILIN3Q9NT22 766 aa10.76□□□□□ -0.69
DDX42-218ENST00000584261 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
DDX42-218ENST00000584261 THOC2Q8NI27 1593 aaKnown RBP10.76□□□□□ -0.69
DDX42-218ENST00000584261 TYW1BQ6NUM6 668 aa10.75□□□□□ -0.69
DDX42-218ENST00000584261 FBXW7Q969H0 707 aa10.74□□□□□ -0.69
DDX42-218ENST00000584261 PHF14O94880 888 aa10.73□□□□□ -0.69
DDX42-218ENST00000584261 ONECUT3O60422 494 aaPredicted RBP10.72□□□□□ -0.69
DDX42-218ENST00000584261 WDR62O43379 1518 aa10.72□□□□□ -0.69
DDX42-218ENST00000584261 URB2Q14146 1524 aaKnown RBP10.71□□□□□ -0.69
DDX42-218ENST00000584261 MFSD10Q14728 455 aa10.7□□□□□ -0.7
DDX42-218ENST00000584261 C6orf132Q5T0Z8 1188 aa10.7□□□□□ -0.7
DDX42-218ENST00000584261 TSR3Q9UJK0 312 aaKnown RBP10.7□□□□□ -0.7
DDX42-218ENST00000584261 HPS5Q9UPZ3 1129 aa10.7□□□□□ -0.7
DDX42-218ENST00000584261 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.69□□□□□ -0.7
DDX42-218ENST00000584261 FAM98CQ17RN3 349 aaKnown RBP10.68□□□□□ -0.7
DDX42-218ENST00000584261 TRIM6-TRIM34B2RNG4 842 aa10.67□□□□□ -0.7
DDX42-218ENST00000584261 LRCH3Q96II8 777 aa10.67□□□□□ -0.7
DDX42-218ENST00000584261 ABCC8Q09428 1581 aa10.65□□□□□ -0.7
DDX42-218ENST00000584261 GTPBP6O43824 516 aaPredicted RBP10.65□□□□□ -0.7
DDX42-218ENST00000584261 PRKD2Q9BZL6 878 aa10.65□□□□□ -0.7
DDX42-218ENST00000584261 TOPBP1Q92547 1522 aa10.64□□□□□ -0.71
DDX42-218ENST00000584261 EPAS1Q99814 870 aa10.63□□□□□ -0.71
DDX42-218ENST00000584261 PRDM2Q13029 1718 aa10.62□□□□□ -0.71
DDX42-218ENST00000584261 NRG2O14511 850 aaPredicted RBP10.62□□□□□ -0.71
DDX42-218ENST00000584261 TJAP1Q5JTD0 557 aa10.61□□□□□ -0.71
DDX42-218ENST00000584261 RBM33Q96EV2 1170 aaKnown RBP10.61□□□□□ -0.71
DDX42-218ENST00000584261 PPP4CP60510 307 aa10.6□□□□□ -0.71
DDX42-218ENST00000584261 IFT140Q96RY7 1462 aa10.6□□□□□ -0.71
DDX42-218ENST00000584261 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
DDX42-218ENST00000584261 ZNF787Q6DD87 383 aa10.57□□□□□ -0.72
DDX42-218ENST00000584261 PPP1R18Q6NYC8 613 aa10.57□□□□□ -0.72
DDX42-218ENST00000584261 CADPS2Q86UW7 1296 aa10.56□□□□□ -0.72
DDX42-218ENST00000584261 TSKSQ9UJT2 592 aa10.56□□□□□ -0.72
DDX42-218ENST00000584261 SOGA1O94964 1423 aa10.56□□□□□ -0.72
DDX42-218ENST00000584261 POLA1P09884 1462 aaPredicted RBP10.55□□□□□ -0.72
DDX42-218ENST00000584261 CUX1P39880 1505 aa10.55□□□□□ -0.72
DDX42-218ENST00000584261 PACS2Q86VP3 889 aa10.55□□□□□ -0.72
DDX42-218ENST00000584261 V9GY48 417 aaPredicted RBP10.55□□□□□ -0.72
DDX42-218ENST00000584261 DPYSL4O14531 572 aa10.54□□□□□ -0.72
DDX42-218ENST00000584261 DDX12PQ92771 950 aa10.54□□□□□ -0.72
DDX42-218ENST00000584261 MTRQ99707 1265 aa10.54□□□□□ -0.72
DDX42-218ENST00000584261 RAD54L2Q9Y4B4 1467 aa10.54□□□□□ -0.72
DDX42-218ENST00000584261 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
DDX42-218ENST00000584261 WRNQ14191 1432 aaPredicted RBP eCLIP10.53□□□□□ -0.72
DDX42-218ENST00000584261 FGD5Q6ZNL6 1462 aa10.53□□□□□ -0.72
DDX42-218ENST00000584261 SAMD7Q7Z3H4 446 aa10.52□□□□□ -0.73
DDX42-218ENST00000584261 IL21Q9HBE4 155 aa10.52□□□□□ -0.73
DDX42-218ENST00000584261 TDRD9Q8NDG6 1382 aaKnown RBP10.52□□□□□ -0.73
DDX42-218ENST00000584261 AQRO60306 1485 aaKnown RBP eCLIP10.51□□□□□ -0.736e-7■■■■■ 34.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms