RNA–Protein interactions for RNA: ENST00000582509.1

TRAPPC8-209, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-209ENST00000582509 C6orf132Q5T0Z8 1188 aa12.31□□□□□ -0.44
TRAPPC8-209ENST00000582509 CDAN1Q8IWY9 1227 aa12.31□□□□□ -0.44
TRAPPC8-209ENST00000582509 RBM33Q96EV2 1170 aaKnown RBP12.31□□□□□ -0.44
TRAPPC8-209ENST00000582509 CERKQ8TCT0 537 aa12.3□□□□□ -0.44
TRAPPC8-209ENST00000582509 KCNK17Q96T54 332 aa12.29□□□□□ -0.44
TRAPPC8-209ENST00000582509 PPP1R3GB7ZBB8 358 aa12.27□□□□□ -0.45
TRAPPC8-209ENST00000582509 NUTM2FA1L443 756 aa12.23□□□□□ -0.45
TRAPPC8-209ENST00000582509 TSR1Q2NL82 804 aaKnown RBP12.23□□□□□ -0.45
TRAPPC8-209ENST00000582509 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRAPPC8-209ENST00000582509 SLC4A5Q9BY07 1137 aa12.23□□□□□ -0.45
TRAPPC8-209ENST00000582509 AXIN2Q9Y2T1 843 aa12.23□□□□□ -0.45
TRAPPC8-209ENST00000582509 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
TRAPPC8-209ENST00000582509 PSEN2P49810 448 aa12.22□□□□□ -0.45
TRAPPC8-209ENST00000582509 LSM11P83369 360 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRAPPC8-209ENST00000582509 RBM26Q5T8P6 1007 aaKnown RBP12.22□□□□□ -0.45
TRAPPC8-209ENST00000582509 POTEEQ6S8J3 1075 aa12.22□□□□□ -0.45
TRAPPC8-209ENST00000582509 TK2O00142 265 aa12.21□□□□□ -0.45
TRAPPC8-209ENST00000582509 FCHSD2O94868 740 aa12.2□□□□□ -0.46
TRAPPC8-209ENST00000582509 LMOD2Q6P5Q4 547 aa12.2□□□□□ -0.46
TRAPPC8-209ENST00000582509 GPIHBP1Q8IV16 184 aa12.2□□□□□ -0.46
TRAPPC8-209ENST00000582509 RBM27Q9P2N5 1060 aaKnown RBP12.19□□□□□ -0.46
TRAPPC8-209ENST00000582509 ONECUT3O60422 494 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC8-209ENST00000582509 KRTAP3-3Q9BYR6 98 aa12.18□□□□□ -0.46
TRAPPC8-209ENST00000582509 KRTAP3-2Q9BYR7 98 aa12.18□□□□□ -0.46
TRAPPC8-209ENST00000582509 COL9A1P20849 921 aa12.17□□□□□ -0.46
TRAPPC8-209ENST00000582509 PTGDRQ13258 359 aa12.17□□□□□ -0.46
TRAPPC8-209ENST00000582509 DMRTA1Q5VZB9 504 aa12.17□□□□□ -0.46
TRAPPC8-209ENST00000582509 ZBED2Q9BTP6 218 aa12.17□□□□□ -0.46
TRAPPC8-209ENST00000582509 ANKRD13DQ6ZTN6 518 aa12.16□□□□□ -0.46
TRAPPC8-209ENST00000582509 CDHR5Q9HBB8 845 aa12.16□□□□□ -0.46
TRAPPC8-209ENST00000582509 HIC1Q14526 733 aa12.15□□□□□ -0.46
TRAPPC8-209ENST00000582509 PRSS12P56730 875 aa12.14□□□□□ -0.47
TRAPPC8-209ENST00000582509 ADGRD1Q6QNK2 874 aa12.14□□□□□ -0.47
TRAPPC8-209ENST00000582509 NPDC1Q9NQX5 325 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC8-209ENST00000582509 CDCA7LQ96GN5 454 aa12.13□□□□□ -0.47
TRAPPC8-209ENST00000582509 VPS9D1Q9Y2B5 631 aa12.13□□□□□ -0.47
TRAPPC8-209ENST00000582509 TRIM6-TRIM34B2RNG4 842 aa12.12□□□□□ -0.47
TRAPPC8-209ENST00000582509 PACS2Q86VP3 889 aa12.12□□□□□ -0.47
TRAPPC8-209ENST00000582509 STAC3Q96MF2 364 aa12.12□□□□□ -0.47
TRAPPC8-209ENST00000582509 RABGEF1Q9UJ41 708 aa12.11□□□□□ -0.47
TRAPPC8-209ENST00000582509 NBPF3Q9H094 633 aa12.1□□□□□ -0.47
TRAPPC8-209ENST00000582509 GNPATO15228 680 aa12.09□□□□□ -0.47
TRAPPC8-209ENST00000582509 PROX2Q3B8N5 592 aa12.08□□□□□ -0.48
TRAPPC8-209ENST00000582509 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
TRAPPC8-209ENST00000582509 GPR37O15354 613 aa12.06□□□□□ -0.48
TRAPPC8-209ENST00000582509 PADI6Q6TGC4 694 aa12.06□□□□□ -0.48
TRAPPC8-209ENST00000582509 TTC13Q8NBP0 860 aa12.06□□□□□ -0.48
TRAPPC8-209ENST00000582509 HRO43593 1189 aa12.05□□□□□ -0.48
TRAPPC8-209ENST00000582509 KIAA1468Q9P260 1216 aa12.05□□□□□ -0.48
TRAPPC8-209ENST00000582509 TSKSQ9UJT2 592 aa12.05□□□□□ -0.48
TRAPPC8-209ENST00000582509 LAPTM4BQ86VI4 370 aa12.04□□□□□ -0.48
TRAPPC8-209ENST00000582509 BHMG1C9JSJ3 638 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC8-209ENST00000582509 MRPL50Q8N5N7 158 aaKnown RBP12.03□□□□□ -0.48
TRAPPC8-209ENST00000582509 ZC3H15Q8WU90 426 aaKnown RBP12.03□□□□□ -0.48
TRAPPC8-209ENST00000582509 OATP04181 439 aa12□□□□□ -0.49
TRAPPC8-209ENST00000582509 TATDN2Q93075 761 aa12□□□□□ -0.49
TRAPPC8-209ENST00000582509 GOLGA8CPA6NN73 597 aa11.99□□□□□ -0.49
TRAPPC8-209ENST00000582509 ZMYND10O75800 440 aa11.99□□□□□ -0.49
TRAPPC8-209ENST00000582509 MAP2K5Q13163 448 aa11.99□□□□□ -0.49
TRAPPC8-209ENST00000582509 RBM46Q8TBY0 533 aaKnown RBP11.99□□□□□ -0.49
TRAPPC8-209ENST00000582509 PNMA3Q9UL41 463 aa11.99□□□□□ -0.49
TRAPPC8-209ENST00000582509 MINK1Q8N4C8 1332 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC8-209ENST00000582509 FAM98CQ17RN3 349 aaKnown RBP11.98□□□□□ -0.49
TRAPPC8-209ENST00000582509 SPNS2Q8IVW8 549 aa11.98□□□□□ -0.49
TRAPPC8-209ENST00000582509 BARGINQ6ZT62 677 aa11.97□□□□□ -0.49
TRAPPC8-209ENST00000582509 NUDT18Q6ZVK8 323 aa11.97□□□□□ -0.49
TRAPPC8-209ENST00000582509 FAM198AQ9UFP1 575 aa11.97□□□□□ -0.49
TRAPPC8-209ENST00000582509 ADGRG1Q9Y653 693 aa11.97□□□□□ -0.49
TRAPPC8-209ENST00000582509 KRI1Q8N9T8 703 aaKnown RBP11.96□□□□□ -0.49
TRAPPC8-209ENST00000582509 MYT1LQ9UL68 1186 aa11.96□□□□□ -0.49
TRAPPC8-209ENST00000582509 FECHP22830 423 aa11.94□□□□□ -0.5
TRAPPC8-209ENST00000582509 HDGFP51858 240 aaKnown RBP11.94□□□□□ -0.5
TRAPPC8-209ENST00000582509 IRF6O14896 467 aa11.93□□□□□ -0.5
TRAPPC8-209ENST00000582509 SEPT9Q9UHD8 586 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC8-209ENST00000582509 EYA1Q99502 592 aa11.92□□□□□ -0.5
TRAPPC8-209ENST00000582509 SLC4A3P48751 1232 aa11.91□□□□□ -0.5
TRAPPC8-209ENST00000582509 ANKK1Q8NFD2 765 aa11.91□□□□□ -0.5
TRAPPC8-209ENST00000582509 ZFRQ96KR1 1074 aaKnown RBP11.91□□□□□ -0.5
TRAPPC8-209ENST00000582509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.9□□□□□ -0.5
TRAPPC8-209ENST00000582509 METTL3Q86U44 580 aaKnown RBP11.9□□□□□ -0.5
TRAPPC8-209ENST00000582509 PXYLP1Q8TE99 480 aa11.9□□□□□ -0.5
TRAPPC8-209ENST00000582509 SMAPO00193 183 aa11.89□□□□□ -0.51
TRAPPC8-209ENST00000582509 DNAJB2P25686 324 aa11.89□□□□□ -0.51
TRAPPC8-209ENST00000582509 WNT2BQ93097 391 aa11.88□□□□□ -0.51
TRAPPC8-209ENST00000582509 RNF166Q96A37 237 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC8-209ENST00000582509 C3orf80F5H4A9 247 aa11.86□□□□□ -0.51
TRAPPC8-209ENST00000582509 NECTIN2Q92692 538 aa11.86□□□□□ -0.51
TRAPPC8-209ENST00000582509 CCDC102AQ96A19 550 aa11.86□□□□□ -0.51
TRAPPC8-209ENST00000582509 LRCH3Q96II8 777 aa11.86□□□□□ -0.51
TRAPPC8-209ENST00000582509 MMRN1Q13201 1228 aa11.85□□□□□ -0.51
TRAPPC8-209ENST00000582509 FAM161AQ3B820 660 aa11.85□□□□□ -0.51
TRAPPC8-209ENST00000582509 AK7Q96M32 723 aa11.85□□□□□ -0.51
TRAPPC8-209ENST00000582509 RCCD1A6NED2 376 aa11.84□□□□□ -0.51
TRAPPC8-209ENST00000582509 KCTD12Q96CX2 325 aaKnown RBP11.84□□□□□ -0.51
TRAPPC8-209ENST00000582509 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC8-209ENST00000582509 TMEM134Q9H6X4 195 aa11.83□□□□□ -0.52
TRAPPC8-209ENST00000582509 SOWAHBA6NEL2 793 aa11.82□□□□□ -0.52
TRAPPC8-209ENST00000582509 TPRNQ4KMQ1 711 aa11.82□□□□□ -0.52
TRAPPC8-209ENST00000582509 SLF2Q8IX21 1173 aa11.82□□□□□ -0.52
TRAPPC8-209ENST00000582509 SAMD7Q7Z3H4 446 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms