RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-215ENST00000582453 C6orf132Q5T0Z8 1188 aa7.54□□□□□ -1.2
MSI2-215ENST00000582453 RBM33Q96EV2 1170 aaKnown RBP7.54□□□□□ -1.2
MSI2-215ENST00000582453 KCNK17Q96T54 332 aa7.54□□□□□ -1.2
MSI2-215ENST00000582453 PRIM1P49642 420 aaKnown RBP7.53□□□□□ -1.2
MSI2-215ENST00000582453 BCANQ96GW7 911 aa7.53□□□□□ -1.2
MSI2-215ENST00000582453 KRTAP3-3Q9BYR6 98 aa7.53□□□□□ -1.2
MSI2-215ENST00000582453 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
MSI2-215ENST00000582453 PPP1R3GB7ZBB8 358 aa7.52□□□□□ -1.21
MSI2-215ENST00000582453 AXIN2Q9Y2T1 843 aa7.52□□□□□ -1.21
MSI2-215ENST00000582453 PSEN2P49810 448 aa7.51□□□□□ -1.21
MSI2-215ENST00000582453 LSM11P83369 360 aaKnown RBP eCLIP7.51□□□□□ -1.21
MSI2-215ENST00000582453 TSR1Q2NL82 804 aaKnown RBP7.5□□□□□ -1.21
MSI2-215ENST00000582453 CERKQ8TCT0 537 aa7.5□□□□□ -1.21
MSI2-215ENST00000582453 SLC4A5Q9BY07 1137 aa7.49□□□□□ -1.21
MSI2-215ENST00000582453 TK2O00142 265 aa7.48□□□□□ -1.21
MSI2-215ENST00000582453 COL9A1P20849 921 aa7.48□□□□□ -1.21
MSI2-215ENST00000582453 RBM26Q5T8P6 1007 aaKnown RBP7.48□□□□□ -1.21
MSI2-215ENST00000582453 DMRTA1Q5VZB9 504 aa7.48□□□□□ -1.21
MSI2-215ENST00000582453 NUTM2FA1L443 756 aa7.47□□□□□ -1.21
MSI2-215ENST00000582453 ZBED2Q9BTP6 218 aa7.47□□□□□ -1.21
MSI2-215ENST00000582453 CDHR5Q9HBB8 845 aa7.47□□□□□ -1.21
MSI2-215ENST00000582453 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.46□□□□□ -1.22
MSI2-215ENST00000582453 PTGDRQ13258 359 aa7.45□□□□□ -1.22
MSI2-215ENST00000582453 LMOD2Q6P5Q4 547 aa7.45□□□□□ -1.22
MSI2-215ENST00000582453 ADGRD1Q6QNK2 874 aa7.45□□□□□ -1.22
MSI2-215ENST00000582453 ANKRD13DQ6ZTN6 518 aa7.45□□□□□ -1.22
MSI2-215ENST00000582453 NPDC1Q9NQX5 325 aaPredicted RBP7.45□□□□□ -1.22
MSI2-215ENST00000582453 RBM27Q9P2N5 1060 aaKnown RBP7.45□□□□□ -1.22
MSI2-215ENST00000582453 VPS9D1Q9Y2B5 631 aa7.45□□□□□ -1.22
MSI2-215ENST00000582453 ONECUT3O60422 494 aaPredicted RBP7.44□□□□□ -1.22
MSI2-215ENST00000582453 FCHSD2O94868 740 aa7.44□□□□□ -1.22
MSI2-215ENST00000582453 GPIHBP1Q8IV16 184 aa7.44□□□□□ -1.22
MSI2-215ENST00000582453 PRSS12P56730 875 aa7.43□□□□□ -1.22
MSI2-215ENST00000582453 CDCA7LQ96GN5 454 aa7.43□□□□□ -1.22
MSI2-215ENST00000582453 PLSCR2Q9NRY7 297 aa7.43□□□□□ -1.22
MSI2-215ENST00000582453 TRIM6-TRIM34B2RNG4 842 aa7.42□□□□□ -1.22
MSI2-215ENST00000582453 HIC1Q14526 733 aa7.42□□□□□ -1.22
MSI2-215ENST00000582453 PROX2Q3B8N5 592 aa7.42□□□□□ -1.22
MSI2-215ENST00000582453 RABGEF1Q9UJ41 708 aa7.42□□□□□ -1.22
MSI2-215ENST00000582453 GPR37O15354 613 aa7.41□□□□□ -1.22
MSI2-215ENST00000582453 HRO43593 1189 aa7.41□□□□□ -1.22
MSI2-215ENST00000582453 PACS2Q86VP3 889 aa7.4□□□□□ -1.22
MSI2-215ENST00000582453 TTC13Q8NBP0 860 aa7.4□□□□□ -1.22
MSI2-215ENST00000582453 NBPF3Q9H094 633 aa7.4□□□□□ -1.22
MSI2-215ENST00000582453 TSKSQ9UJT2 592 aa7.4□□□□□ -1.22
MSI2-215ENST00000582453 BHMG1C9JSJ3 638 aaPredicted RBP7.39□□□□□ -1.23
MSI2-215ENST00000582453 PADI6Q6TGC4 694 aa7.39□□□□□ -1.23
MSI2-215ENST00000582453 GNPATO15228 680 aa7.38□□□□□ -1.23
MSI2-215ENST00000582453 SPNS2Q8IVW8 549 aa7.38□□□□□ -1.23
MSI2-215ENST00000582453 STAC3Q96MF2 364 aa7.38□□□□□ -1.23
MSI2-215ENST00000582453 KIAA1468Q9P260 1216 aa7.38□□□□□ -1.23
MSI2-215ENST00000582453 NBPF26B4DH59 902 aa7.37□□□□□ -1.23
MSI2-215ENST00000582453 FAM198AQ9UFP1 575 aa7.37□□□□□ -1.23
MSI2-215ENST00000582453 LAPTM4BQ86VI4 370 aa7.36□□□□□ -1.23
MSI2-215ENST00000582453 MRPL50Q8N5N7 158 aaKnown RBP7.36□□□□□ -1.23
MSI2-215ENST00000582453 ZC3H15Q8WU90 426 aaKnown RBP7.35□□□□□ -1.23
MSI2-215ENST00000582453 TATDN2Q93075 761 aa7.35□□□□□ -1.23
MSI2-215ENST00000582453 MYT1LQ9UL68 1186 aa7.34□□□□□ -1.23
MSI2-215ENST00000582453 ADGRG1Q9Y653 693 aa7.34□□□□□ -1.23
MSI2-215ENST00000582453 FECHP22830 423 aa7.33□□□□□ -1.24
MSI2-215ENST00000582453 FAM98CQ17RN3 349 aaKnown RBP7.33□□□□□ -1.24
MSI2-215ENST00000582453 NUDT18Q6ZVK8 323 aa7.33□□□□□ -1.24
MSI2-215ENST00000582453 SEPT9Q9UHD8 586 aaPredicted RBP7.33□□□□□ -1.24
MSI2-215ENST00000582453 PNMA3Q9UL41 463 aa7.33□□□□□ -1.24
MSI2-215ENST00000582453 ZMYND10O75800 440 aa7.32□□□□□ -1.24
MSI2-215ENST00000582453 OATP04181 439 aa7.32□□□□□ -1.24
MSI2-215ENST00000582453 MAP2K5Q13163 448 aa7.32□□□□□ -1.24
MSI2-215ENST00000582453 MINK1Q8N4C8 1332 aaPredicted RBP7.31□□□□□ -1.24
MSI2-215ENST00000582453 GOLGA8CPA6NN73 597 aa7.31□□□□□ -1.24
MSI2-215ENST00000582453 C3orf80F5H4A9 247 aa7.31□□□□□ -1.24
MSI2-215ENST00000582453 SMAPO00193 183 aa7.31□□□□□ -1.24
MSI2-215ENST00000582453 MMRN1Q13201 1228 aa7.31□□□□□ -1.24
MSI2-215ENST00000582453 BARGINQ6ZT62 677 aa7.31□□□□□ -1.24
MSI2-215ENST00000582453 RBM46Q8TBY0 533 aaKnown RBP7.31□□□□□ -1.24
MSI2-215ENST00000582453 EYA1Q99502 592 aa7.31□□□□□ -1.24
MSI2-215ENST00000582453 ZFRQ96KR1 1074 aaKnown RBP7.3□□□□□ -1.24
MSI2-215ENST00000582453 IRF6O14896 467 aa7.29□□□□□ -1.24
MSI2-215ENST00000582453 RNF166Q96A37 237 aaPredicted RBP7.29□□□□□ -1.24
MSI2-215ENST00000582453 FAM161AQ3B820 660 aa7.28□□□□□ -1.24
MSI2-215ENST00000582453 METTL3Q86U44 580 aaKnown RBP7.28□□□□□ -1.24
MSI2-215ENST00000582453 ANKK1Q8NFD2 765 aa7.28□□□□□ -1.24
MSI2-215ENST00000582453 PXYLP1Q8TE99 480 aa7.28□□□□□ -1.24
MSI2-215ENST00000582453 WNT2BQ93097 391 aa7.28□□□□□ -1.24
MSI2-215ENST00000582453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.27□□□□□ -1.25
MSI2-215ENST00000582453 DNAJB2P25686 324 aa7.27□□□□□ -1.25
MSI2-215ENST00000582453 KRI1Q8N9T8 703 aaKnown RBP7.27□□□□□ -1.25
MSI2-215ENST00000582453 RCCD1A6NED2 376 aa7.26□□□□□ -1.25
MSI2-215ENST00000582453 HDGFP51858 240 aaKnown RBP7.26□□□□□ -1.25
MSI2-215ENST00000582453 CCDC102AQ96A19 550 aa7.26□□□□□ -1.25
MSI2-215ENST00000582453 KCTD12Q96CX2 325 aaKnown RBP7.26□□□□□ -1.25
MSI2-215ENST00000582453 SOWAHBA6NEL2 793 aa7.25□□□□□ -1.25
MSI2-215ENST00000582453 THSD4Q6ZMP0 1018 aa7.25□□□□□ -1.25
MSI2-215ENST00000582453 SAMD7Q7Z3H4 446 aa7.25□□□□□ -1.25
MSI2-215ENST00000582453 LRCH3Q96II8 777 aa7.25□□□□□ -1.25
MSI2-215ENST00000582453 TMEM134Q9H6X4 195 aa7.25□□□□□ -1.25
MSI2-215ENST00000582453 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.25□□□□□ -1.25
MSI2-215ENST00000582453 SLC4A3P48751 1232 aa7.22□□□□□ -1.25
MSI2-215ENST00000582453 BCAMP50895 628 aa7.22□□□□□ -1.25
MSI2-215ENST00000582453 SWT1Q5T5J6 900 aaKnown RBP7.22□□□□□ -1.25
MSI2-215ENST00000582453 AK7Q96M32 723 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms