RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 ADGRL1O94910 1474 aa10.31□□□□□ -0.76
RPA1-207ENST00000574049 AKNAQ7Z591 1439 aa10.31□□□□□ -0.76
RPA1-207ENST00000574049 SYCP2Q9BX26 1530 aa10.31□□□□□ -0.76
RPA1-207ENST00000574049 KDM5BQ9UGL1 1544 aa10.31□□□□□ -0.76
RPA1-207ENST00000574049 ABCC10Q5T3U5 1492 aa10.3□□□□□ -0.76
RPA1-207ENST00000574049 CCDC141Q6ZP82 1450 aa10.3□□□□□ -0.76
RPA1-207ENST00000574049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.3□□□□□ -0.76
RPA1-207ENST00000574049 KANK1Q14678 1352 aa10.29□□□□□ -0.76
RPA1-207ENST00000574049 PLEKHH2Q8IVE3 1493 aa10.29□□□□□ -0.76
RPA1-207ENST00000574049 TMEM132AQ24JP5 1023 aa10.28□□□□□ -0.76
RPA1-207ENST00000574049 PPP6R1Q9UPN7 881 aa10.28□□□□□ -0.76
RPA1-207ENST00000574049 ZCCHC11Q5TAX3 1644 aaKnown RBP10.28□□□□□ -0.76
RPA1-207ENST00000574049 SHROOM2Q13796 1616 aa10.27□□□□□ -0.76
RPA1-207ENST00000574049 TCOF1Q13428 1488 aaKnown RBP10.27□□□□□ -0.77
RPA1-207ENST00000574049 TTC37Q6PGP7 1564 aa10.27□□□□□ -0.77
RPA1-207ENST00000574049 CARD11Q9BXL7 1154 aa10.27□□□□□ -0.77
RPA1-207ENST00000574049 EIF4G2P78344 907 aaKnown RBP eCLIP10.27□□□□□ -0.77
RPA1-207ENST00000574049 SUPT16HQ9Y5B9 1047 aaKnown RBP10.27□□□□□ -0.77
RPA1-207ENST00000574049 ADCY10Q96PN6 1610 aa10.27□□□□□ -0.77
RPA1-207ENST00000574049 UHRF1BP1LA0JNW5 1464 aa10.26□□□□□ -0.77
RPA1-207ENST00000574049 MRS2Q9HD23 443 aa10.26□□□□□ -0.77
RPA1-207ENST00000574049 ROCK1Q13464 1354 aa10.26□□□□□ -0.77
RPA1-207ENST00000574049 PLEKHG5O94827 1062 aa10.24□□□□□ -0.77
RPA1-207ENST00000574049 HSPA5P11021 654 aaKnown RBP10.24□□□□□ -0.77
RPA1-207ENST00000574049 NBPF8Q3BBV2 869 aa10.23□□□□□ -0.77
RPA1-207ENST00000574049 MBD5Q9P267 1494 aa10.23□□□□□ -0.77
RPA1-207ENST00000574049 ARHGEF12Q9NZN5 1544 aa10.23□□□□□ -0.77
RPA1-207ENST00000574049 KDM6BO15054 1643 aa10.22□□□□□ -0.77
RPA1-207ENST00000574049 SAFB2Q14151 953 aaKnown RBP eCLIP10.22□□□□□ -0.77
RPA1-207ENST00000574049 CFAP44Q96MT7 982 aa10.22□□□□□ -0.77
RPA1-207ENST00000574049 CCDC144AA2RUR9 1427 aa10.21□□□□□ -0.77
RPA1-207ENST00000574049 PPP4R3CPQ6ZMV5 832 aa10.21□□□□□ -0.77
RPA1-207ENST00000574049 ITSN2Q9NZM3 1697 aa10.21□□□□□ -0.77
RPA1-207ENST00000574049 RIMBP3CA6NJZ7 1639 aa10.21□□□□□ -0.77
RPA1-207ENST00000574049 RIMBP3BA6NNM3 1639 aa10.21□□□□□ -0.77
RPA1-207ENST00000574049 RIMBP3Q9UFD9 1639 aa10.21□□□□□ -0.77
RPA1-207ENST00000574049 TMC1Q8TDI8 760 aa10.21□□□□□ -0.78
RPA1-207ENST00000574049 MAPKBP1O60336 1514 aa10.21□□□□□ -0.78
RPA1-207ENST00000574049 FBXO31Q5XUX0 539 aaPredicted RBP10.2□□□□□ -0.78
RPA1-207ENST00000574049 DENND4BO75064 1496 aaPredicted RBP10.2□□□□□ -0.78
RPA1-207ENST00000574049 SAMD9LQ8IVG5 1584 aa10.2□□□□□ -0.78
RPA1-207ENST00000574049 KIAA1107Q9UPP5 1409 aa10.2□□□□□ -0.78
RPA1-207ENST00000574049 VSIG10Q8N0Z9 540 aa10.2□□□□□ -0.78
RPA1-207ENST00000574049 ANKRD30BQ9BXX2 1392 aa10.19□□□□□ -0.78
RPA1-207ENST00000574049 STK26Q9P289 416 aa10.19□□□□□ -0.78
RPA1-207ENST00000574049 DNMT1P26358 1616 aaKnown RBP10.19□□□□□ -0.78
RPA1-207ENST00000574049 CEBPAP49715 358 aaPredicted RBP10.19□□□□□ -0.78
RPA1-207ENST00000574049 CDC42BPAQ5VT25 1732 aa10.19□□□□□ -0.78
RPA1-207ENST00000574049 TSHZ2Q9NRE2 1034 aa10.18□□□□□ -0.78
RPA1-207ENST00000574049 NBPF1Q3BBV0 1214 aa10.18□□□□□ -0.78
RPA1-207ENST00000574049 TSPOAP1O95153 1857 aa10.18□□□□□ -0.78
RPA1-207ENST00000574049 DNAJC5Q9H3Z4 198 aa10.18□□□□□ -0.78
RPA1-207ENST00000574049 B4GALNT3Q6L9W6 998 aa10.17□□□□□ -0.78
RPA1-207ENST00000574049 DHX29Q7Z478 1369 aaKnown RBP10.17□□□□□ -0.78
RPA1-207ENST00000574049 CANXP27824 592 aaKnown RBP10.16□□□□□ -0.78
RPA1-207ENST00000574049 ST20-MTHFSA0A0A6YYL1 179 aa10.16□□□□□ -0.78
RPA1-207ENST00000574049 YEATS2Q9ULM3 1422 aa10.15□□□□□ -0.78
RPA1-207ENST00000574049 MYO5CQ9NQX4 1742 aa10.15□□□□□ -0.78
RPA1-207ENST00000574049 ROCK2O75116 1388 aaKnown RBP10.15□□□□□ -0.78
RPA1-207ENST00000574049 CDC42BPBQ9Y5S2 1711 aa10.14□□□□□ -0.79
RPA1-207ENST00000574049 TMEM132EQ6IEE7 984 aa10.14□□□□□ -0.79
RPA1-207ENST00000574049 ZNF518AQ6AHZ1 1483 aa10.14□□□□□ -0.79
RPA1-207ENST00000574049 TRAK1Q9UPV9 953 aa10.13□□□□□ -0.79
RPA1-207ENST00000574049 PZPP20742 1482 aa10.13□□□□□ -0.79
RPA1-207ENST00000574049 CFAP70Q5T0N1 1121 aa10.13□□□□□ -0.79
RPA1-207ENST00000574049 CCDC136Q96JN2 1154 aa10.13□□□□□ -0.79
RPA1-207ENST00000574049 PREX2Q70Z35 1606 aa10.13□□□□□ -0.79
RPA1-207ENST00000574049 CFAP65Q6ZU64 1925 aaKnown RBP10.12□□□□□ -0.79
RPA1-207ENST00000574049 ARID3AQ99856 593 aa10.12□□□□□ -0.79
RPA1-207ENST00000574049 A2MP01023 1474 aa10.12□□□□□ -0.79
RPA1-207ENST00000574049 IDI1Q13907 227 aa10.11□□□□□ -0.79
RPA1-207ENST00000574049 TNNT2P45379 298 aaPredicted RBP10.11□□□□□ -0.79
RPA1-207ENST00000574049 PAXIP1Q6ZW49 1069 aaPredicted RBP10.11□□□□□ -0.79
RPA1-207ENST00000574049 ADGRL2O95490 1459 aa10.11□□□□□ -0.79
RPA1-207ENST00000574049 RBM19Q9Y4C8 960 aaKnown RBP10.1□□□□□ -0.79
RPA1-207ENST00000574049 SHANK2Q9UPX8 1470 aa10.1□□□□□ -0.79
RPA1-207ENST00000574049 ABCC1P33527 1531 aa10.1□□□□□ -0.79
RPA1-207ENST00000574049 NEUROD2Q15784 382 aa10.1□□□□□ -0.79
RPA1-207ENST00000574049 POGZQ7Z3K3 1410 aa10.1□□□□□ -0.79
RPA1-207ENST00000574049 ATP7AQ04656 1500 aa10.09□□□□□ -0.79
RPA1-207ENST00000574049 DUOX2Q9NRD8 1548 aa10.09□□□□□ -0.79
RPA1-207ENST00000574049 FAM135AQ9P2D6 1515 aa10.08□□□□□ -0.8
RPA1-207ENST00000574049 C11orf95C9JLR9 678 aaPredicted RBP10.08□□□□□ -0.8
RPA1-207ENST00000574049 POGKQ9P215 609 aa10.08□□□□□ -0.8
RPA1-207ENST00000574049 NUTM2FA1L443 756 aa10.07□□□□□ -0.8
RPA1-207ENST00000574049 ANP32AP39687 249 aaKnown RBP10.07□□□□□ -0.8
RPA1-207ENST00000574049 USP47Q96K76 1375 aa10.07□□□□□ -0.8
RPA1-207ENST00000574049 RTEL1-TNFRSF6BF6WH68 1400 aa10.07□□□□□ -0.8
RPA1-207ENST00000574049 CC2D1BQ5T0F9 858 aaKnown RBP10.07□□□□□ -0.8
RPA1-207ENST00000574049 ADGRF5Q8IZF2 1346 aa10.07□□□□□ -0.8
RPA1-207ENST00000574049 ARHGEF5Q12774 1597 aa10.07□□□□□ -0.8
RPA1-207ENST00000574049 RPRD2Q5VT52 1461 aaKnown RBP10.06□□□□□ -0.8
RPA1-207ENST00000574049 FOXD4L1Q9NU39 408 aa10.06□□□□□ -0.8
RPA1-207ENST00000574049 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.06□□□□□ -0.8
RPA1-207ENST00000574049 LAS1LQ9Y4W2 734 aaKnown RBP10.06□□□□□ -0.8
RPA1-207ENST00000574049 TEX14Q8IWB6 1497 aa10.06□□□□□ -0.8
RPA1-207ENST00000574049 ERBINQ96RT1 1412 aa10.06□□□□□ -0.8
RPA1-207ENST00000574049 DEKP35659 375 aaKnown RBP10.06□□□□□ -0.8
RPA1-207ENST00000574049 NEO1Q92859 1461 aa10.05□□□□□ -0.8
RPA1-207ENST00000574049 WASHC2AQ641Q2 1341 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms