RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 GNPATO15228 680 aa10.43□□□□□ -0.74
SF3B3-214ENST00000572365 MAP2K5Q13163 448 aa10.43□□□□□ -0.74
SF3B3-214ENST00000572365 PTGDRQ13258 359 aa10.42□□□□□ -0.74
SF3B3-214ENST00000572365 GTF3C3Q9Y5Q9 886 aa10.42□□□□□ -0.74
SF3B3-214ENST00000572365 EN1Q05925 392 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-214ENST00000572365 CYB5RLQ6IPT4 315 aa10.41□□□□□ -0.74
SF3B3-214ENST00000572365 IRF6O14896 467 aa10.4□□□□□ -0.74
SF3B3-214ENST00000572365 PCDHGA10Q9Y5H3 936 aa10.4□□□□□ -0.74
SF3B3-214ENST00000572365 PDE4DQ08499 809 aa10.39□□□□□ -0.75
SF3B3-214ENST00000572365 POTEGQ6S5H5 508 aa10.39□□□□□ -0.75
SF3B3-214ENST00000572365 RIMBP3CA6NJZ7 1639 aa10.39□□□□□ -0.75
SF3B3-214ENST00000572365 RIMBP3BA6NNM3 1639 aa10.39□□□□□ -0.75
SF3B3-214ENST00000572365 RIMBP3Q9UFD9 1639 aa10.39□□□□□ -0.75
SF3B3-214ENST00000572365 HOXB3P14651 431 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-214ENST00000572365 FECHP22830 423 aa10.38□□□□□ -0.75
SF3B3-214ENST00000572365 DOK7Q18PE1 504 aa10.38□□□□□ -0.75
SF3B3-214ENST00000572365 SLAIN1Q8ND83 568 aa10.38□□□□□ -0.75
SF3B3-214ENST00000572365 CCDC102AQ96A19 550 aa10.38□□□□□ -0.75
SF3B3-214ENST00000572365 JPH4Q96JJ6 628 aa10.38□□□□□ -0.75
SF3B3-214ENST00000572365 GPBP1L1Q9HC44 474 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-214ENST00000572365 BAZ1BQ9UIG0 1483 aaKnown RBP10.37□□□□□ -0.75
SF3B3-214ENST00000572365 TYW1BQ6NUM6 668 aa10.37□□□□□ -0.75
SF3B3-214ENST00000572365 FBXW7Q969H0 707 aa10.37□□□□□ -0.75
SF3B3-214ENST00000572365 NPDC1Q9NQX5 325 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-214ENST00000572365 LAMC3Q9Y6N6 1575 aa10.37□□□□□ -0.75
SF3B3-214ENST00000572365 PDS5BQ9NTI5 1447 aa10.36□□□□□ -0.75
SF3B3-214ENST00000572365 MAP3K7O43318 606 aa10.36□□□□□ -0.75
SF3B3-214ENST00000572365 MAMSTRQ6ZN01 415 aa10.36□□□□□ -0.75
SF3B3-214ENST00000572365 KDM4CQ9H3R0 1056 aa10.36□□□□□ -0.75
SF3B3-214ENST00000572365 ZSWIM6Q9HCJ5 1215 aa10.36□□□□□ -0.75
SF3B3-214ENST00000572365 HMGXB3Q12766 1538 aa10.35□□□□□ -0.75
SF3B3-214ENST00000572365 FOSBP53539 338 aa10.35□□□□□ -0.75
SF3B3-214ENST00000572365 AMHR2Q16671 573 aa10.35□□□□□ -0.75
SF3B3-214ENST00000572365 CDHR5Q9HBB8 845 aa10.35□□□□□ -0.75
SF3B3-214ENST00000572365 SCUBE2Q9NQ36 999 aa10.35□□□□□ -0.75
SF3B3-214ENST00000572365 SMARCA4P51532 1647 aa10.35□□□□□ -0.75
SF3B3-214ENST00000572365 DAXXQ9UER7 740 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-214ENST00000572365 RIMBP2O15034 1052 aa10.33□□□□□ -0.76
SF3B3-214ENST00000572365 RBM33Q96EV2 1170 aaKnown RBP10.33□□□□□ -0.76
SF3B3-214ENST00000572365 MRC2Q9UBG0 1479 aa10.32□□□□□ -0.76
SF3B3-214ENST00000572365 TSR1Q2NL82 804 aaKnown RBP10.32□□□□□ -0.76
SF3B3-214ENST00000572365 ARSIQ5FYB1 569 aa10.32□□□□□ -0.76
SF3B3-214ENST00000572365 GPR153Q6NV75 609 aa10.32□□□□□ -0.76
SF3B3-214ENST00000572365 NUDT7P0C024 238 aa10.31□□□□□ -0.76
SF3B3-214ENST00000572365 KHSRPQ92945 711 aaKnown RBP eCLIP10.3□□□□□ -0.762e-8■□□□□ 10.7
SF3B3-214ENST00000572365 ZDHHC16Q969W1 377 aa10.29□□□□□ -0.76
SF3B3-214ENST00000572365 PARP9Q8IXQ6 854 aa10.28□□□□□ -0.76
SF3B3-214ENST00000572365 ZNF454Q8N9F8 522 aa10.28□□□□□ -0.76
SF3B3-214ENST00000572365 C6orf132Q5T0Z8 1188 aa10.27□□□□□ -0.77
SF3B3-214ENST00000572365 CERKQ8TCT0 537 aa10.27□□□□□ -0.77
SF3B3-214ENST00000572365 WDR62O43379 1518 aa10.27□□□□□ -0.77
SF3B3-214ENST00000572365 ERICH6Q7L0X2 663 aa10.26□□□□□ -0.77
SF3B3-214ENST00000572365 ZNF710Q8N1W2 664 aa10.26□□□□□ -0.77
SF3B3-214ENST00000572365 IL27Q8NEV9 243 aa10.26□□□□□ -0.77
SF3B3-214ENST00000572365 TIMELESSQ9UNS1 1208 aa10.26□□□□□ -0.77
SF3B3-214ENST00000572365 ARHGEF11O15085 1522 aa10.26□□□□□ -0.77
SF3B3-214ENST00000572365 CADPSQ9ULU8 1353 aa10.26□□□□□ -0.77
SF3B3-214ENST00000572365 ADAM33Q9BZ11 813 aa10.24□□□□□ -0.77
SF3B3-214ENST00000572365 FAM117AQ9C073 453 aa10.24□□□□□ -0.77
SF3B3-214ENST00000572365 PCDH10Q9P2E7 1040 aa10.24□□□□□ -0.77
SF3B3-214ENST00000572365 RBM27Q9P2N5 1060 aaKnown RBP10.23□□□□□ -0.77
SF3B3-214ENST00000572365 SNPHO15079 494 aa10.22□□□□□ -0.77
SF3B3-214ENST00000572365 TTLL12Q14166 644 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-214ENST00000572365 TTC13Q8NBP0 860 aa10.22□□□□□ -0.77
SF3B3-214ENST00000572365 DDRGK1Q96HY6 314 aa10.22□□□□□ -0.77
SF3B3-214ENST00000572365 LHX6Q9UPM6 363 aa10.22□□□□□ -0.77
SF3B3-214ENST00000572365 PSDA5PKW4 1024 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-214ENST00000572365 TMUB1Q9BVT8 246 aa10.21□□□□□ -0.77
SF3B3-214ENST00000572365 PLEKHG3A1L390 1219 aa10.2□□□□□ -0.78
SF3B3-214ENST00000572365 GIGYF2Q6Y7W6 1299 aaKnown RBP10.2□□□□□ -0.78
SF3B3-214ENST00000572365 MROH2BQ7Z745 1585 aa10.19□□□□□ -0.78
SF3B3-214ENST00000572365 HOXB1P14653 301 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-214ENST00000572365 PPP4R3BQ5MIZ7 849 aa10.19□□□□□ -0.78
SF3B3-214ENST00000572365 PADI6Q6TGC4 694 aa10.19□□□□□ -0.78
SF3B3-214ENST00000572365 PHOX2BQ99453 314 aa10.19□□□□□ -0.78
SF3B3-214ENST00000572365 REPIN1Q9BWE0 567 aaKnown RBP10.19□□□□□ -0.78
SF3B3-214ENST00000572365 BCL2L12Q9HB09 334 aa10.19□□□□□ -0.78
SF3B3-214ENST00000572365 CEP164Q9UPV0 1460 aa10.18□□□□□ -0.78
SF3B3-214ENST00000572365 OATP04181 439 aa10.18□□□□□ -0.78
SF3B3-214ENST00000572365 METTL3Q86U44 580 aaKnown RBP10.18□□□□□ -0.78
SF3B3-214ENST00000572365 ADGRG1Q9Y653 693 aa10.18□□□□□ -0.78
SF3B3-214ENST00000572365 CLCN1P35523 988 aa10.17□□□□□ -0.78
SF3B3-214ENST00000572365 PRSS12P56730 875 aa10.17□□□□□ -0.78
SF3B3-214ENST00000572365 LCE2DQ5TA82 110 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-214ENST00000572365 FANCD2Q9BXW9 1451 aa10.17□□□□□ -0.78
SF3B3-214ENST00000572365 MS4A1P11836 297 aa10.15□□□□□ -0.78
SF3B3-214ENST00000572365 MDM2Q00987 491 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-214ENST00000572365 FAM161AQ3B820 660 aa10.15□□□□□ -0.78
SF3B3-214ENST00000572365 PXYLP1Q8TE99 480 aa10.15□□□□□ -0.78
SF3B3-214ENST00000572365 CDCA7LQ96GN5 454 aa10.15□□□□□ -0.78
SF3B3-214ENST00000572365 GPCPD1Q9NPB8 672 aa10.15□□□□□ -0.78
SF3B3-214ENST00000572365 ZNF608Q9ULD9 1512 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-214ENST00000572365 URB2Q14146 1524 aaKnown RBP10.14□□□□□ -0.79
SF3B3-214ENST00000572365 ARAP1Q96P48 1450 aa10.14□□□□□ -0.79
SF3B3-214ENST00000572365 COL9A1P20849 921 aa10.13□□□□□ -0.79
SF3B3-214ENST00000572365 GOPCQ9HD26 462 aa10.13□□□□□ -0.79
SF3B3-214ENST00000572365 PPP1R3GB7ZBB8 358 aa10.12□□□□□ -0.79
SF3B3-214ENST00000572365 C14orf37Q86TY3 774 aa10.12□□□□□ -0.79
SF3B3-214ENST00000572365 FAM163AQ96GL9 167 aaPredicted RBP10.12□□□□□ -0.79
SF3B3-214ENST00000572365 PEG3Q9GZU2 1588 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms