RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 FAM9BQ8IZU0 186 aa16.53■□□□□ 0.24
TMEM170A-205ENST00000568559 GTF3C3Q9Y5Q9 886 aa16.53■□□□□ 0.24
TMEM170A-205ENST00000568559 ST20-MTHFSA0A0A6YYL1 179 aa16.52■□□□□ 0.23
TMEM170A-205ENST00000568559 SHROOM2Q13796 1616 aa16.52■□□□□ 0.23
TMEM170A-205ENST00000568559 ZNF518AQ6AHZ1 1483 aa16.51■□□□□ 0.23
TMEM170A-205ENST00000568559 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
TMEM170A-205ENST00000568559 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
TMEM170A-205ENST00000568559 SHANK2Q9UPX8 1470 aa16.51■□□□□ 0.23
TMEM170A-205ENST00000568559 TTC37Q6PGP7 1564 aa16.5■□□□□ 0.23
TMEM170A-205ENST00000568559 VGFO15240 615 aaPredicted RBP16.49■□□□□ 0.23
TMEM170A-205ENST00000568559 MBD5Q9P267 1494 aa16.48■□□□□ 0.23
TMEM170A-205ENST00000568559 LRRIQ1Q96JM4 1722 aa16.48■□□□□ 0.23
TMEM170A-205ENST00000568559 MAPKBP1O60336 1514 aa16.48■□□□□ 0.23
TMEM170A-205ENST00000568559 DUOX2Q9NRD8 1548 aa16.47■□□□□ 0.23
TMEM170A-205ENST00000568559 USP47Q96K76 1375 aa16.47■□□□□ 0.23
TMEM170A-205ENST00000568559 TEX14Q8IWB6 1497 aa16.47■□□□□ 0.23
TMEM170A-205ENST00000568559 TRAK1Q9UPV9 953 aa16.47■□□□□ 0.23
TMEM170A-205ENST00000568559 KNSTRNQ9Y448 316 aa16.47■□□□□ 0.23
TMEM170A-205ENST00000568559 ADGRL2O95490 1459 aa16.45■□□□□ 0.22
TMEM170A-205ENST00000568559 MYO5CQ9NQX4 1742 aa16.45■□□□□ 0.22
TMEM170A-205ENST00000568559 HNRNPUQ00839 825 aaKnown RBP eCLIP16.45■□□□□ 0.22
TMEM170A-205ENST00000568559 ERBINQ96RT1 1412 aa16.45■□□□□ 0.22
TMEM170A-205ENST00000568559 ADCY10Q96PN6 1610 aa16.44■□□□□ 0.22
TMEM170A-205ENST00000568559 A2MP01023 1474 aa16.44■□□□□ 0.22
TMEM170A-205ENST00000568559 RTEL1-TNFRSF6BF6WH68 1400 aa16.44■□□□□ 0.22
TMEM170A-205ENST00000568559 C14orf37Q86TY3 774 aa16.44■□□□□ 0.22
TMEM170A-205ENST00000568559 SAMD9LQ8IVG5 1584 aa16.43■□□□□ 0.22
TMEM170A-205ENST00000568559 EID1Q9Y6B2 187 aa16.43■□□□□ 0.22
TMEM170A-205ENST00000568559 NBPF1Q3BBV0 1214 aa16.42■□□□□ 0.22
TMEM170A-205ENST00000568559 SRPK2P78362 688 aaKnown RBP16.42■□□□□ 0.22
TMEM170A-205ENST00000568559 STAC3Q96MF2 364 aa16.42■□□□□ 0.22
TMEM170A-205ENST00000568559 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
TMEM170A-205ENST00000568559 EIF3AQ14152 1382 aaKnown RBP16.4■□□□□ 0.22
TMEM170A-205ENST00000568559 CFAP70Q5T0N1 1121 aa16.4■□□□□ 0.22
TMEM170A-205ENST00000568559 SLC52A1Q9NWF4 448 aa16.4■□□□□ 0.22
TMEM170A-205ENST00000568559 PREX2Q70Z35 1606 aa16.4■□□□□ 0.22
TMEM170A-205ENST00000568559 RPRD2Q5VT52 1461 aaKnown RBP16.39■□□□□ 0.21
TMEM170A-205ENST00000568559 ARHGEF5Q12774 1597 aa16.39■□□□□ 0.21
TMEM170A-205ENST00000568559 FBXO31Q5XUX0 539 aaPredicted RBP16.38■□□□□ 0.21
TMEM170A-205ENST00000568559 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
TMEM170A-205ENST00000568559 FAM135AQ9P2D6 1515 aa16.38■□□□□ 0.21
TMEM170A-205ENST00000568559 TMEM132EQ6IEE7 984 aa16.37■□□□□ 0.21
TMEM170A-205ENST00000568559 ATP7AQ04656 1500 aa16.37■□□□□ 0.21
TMEM170A-205ENST00000568559 NEO1Q92859 1461 aa16.37■□□□□ 0.21
TMEM170A-205ENST00000568559 PZPP20742 1482 aa16.36■□□□□ 0.21
TMEM170A-205ENST00000568559 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
TMEM170A-205ENST00000568559 ARHGEF12Q9NZN5 1544 aa16.36■□□□□ 0.21
TMEM170A-205ENST00000568559 IRX6P78412 446 aaPredicted RBP16.34■□□□□ 0.21
TMEM170A-205ENST00000568559 ABCC1P33527 1531 aa16.34■□□□□ 0.21
TMEM170A-205ENST00000568559 IDI1Q13907 227 aa16.33■□□□□ 0.21
TMEM170A-205ENST00000568559 KDM6BO15054 1643 aa16.33■□□□□ 0.21
TMEM170A-205ENST00000568559 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.21
TMEM170A-205ENST00000568559 ZBTB7CA1YPR0 619 aa16.33■□□□□ 0.2
TMEM170A-205ENST00000568559 TNNT2P45379 298 aaPredicted RBP16.33■□□□□ 0.2
TMEM170A-205ENST00000568559 RIMBP3CA6NJZ7 1639 aa16.32■□□□□ 0.2
TMEM170A-205ENST00000568559 RIMBP3BA6NNM3 1639 aa16.32■□□□□ 0.2
TMEM170A-205ENST00000568559 RIMBP3Q9UFD9 1639 aa16.32■□□□□ 0.2
TMEM170A-205ENST00000568559 KIF7Q2M1P5 1343 aa16.31■□□□□ 0.2
TMEM170A-205ENST00000568559 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.31■□□□□ 0.2
TMEM170A-205ENST00000568559 WASHC2AQ641Q2 1341 aa16.31■□□□□ 0.2
TMEM170A-205ENST00000568559 CEBPAP49715 358 aaPredicted RBP16.31■□□□□ 0.2
TMEM170A-205ENST00000568559 GCC2Q8IWJ2 1684 aa16.31■□□□□ 0.2
TMEM170A-205ENST00000568559 NEFMP07197 916 aa16.31■□□□□ 0.2
TMEM170A-205ENST00000568559 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
TMEM170A-205ENST00000568559 PPP6R1Q9UPN7 881 aa16.3■□□□□ 0.2
TMEM170A-205ENST00000568559 CCDC7Q96M83 1385 aa16.29■□□□□ 0.2
TMEM170A-205ENST00000568559 CCER2I3L3R5 266 aa16.28■□□□□ 0.2
TMEM170A-205ENST00000568559 MINK1Q8N4C8 1332 aaPredicted RBP16.27■□□□□ 0.2
TMEM170A-205ENST00000568559 PANK3Q9H999 370 aa16.27■□□□□ 0.2
TMEM170A-205ENST00000568559 CDC42BPBQ9Y5S2 1711 aa16.27■□□□□ 0.2
TMEM170A-205ENST00000568559 YEATS2Q9ULM3 1422 aa16.27■□□□□ 0.2
TMEM170A-205ENST00000568559 RPGRIP1LQ68CZ1 1315 aa16.27■□□□□ 0.2
TMEM170A-205ENST00000568559 CENPJQ9HC77 1338 aaPredicted RBP16.27■□□□□ 0.19
TMEM170A-205ENST00000568559 TXNDC2Q86VQ3 553 aa16.26■□□□□ 0.19
TMEM170A-205ENST00000568559 TSPOAP1O95153 1857 aa16.26■□□□□ 0.19
TMEM170A-205ENST00000568559 ADGRF5Q8IZF2 1346 aa16.26■□□□□ 0.19
TMEM170A-205ENST00000568559 A0A0G2JS52 829 aa16.26■□□□□ 0.19
TMEM170A-205ENST00000568559 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
TMEM170A-205ENST00000568559 CFAP74Q9C0B2 1584 aa16.25■□□□□ 0.19
TMEM170A-205ENST00000568559 KTN1Q86UP2 1357 aaKnown RBP16.25■□□□□ 0.19
TMEM170A-205ENST00000568559 ARAP3Q8WWN8 1544 aa16.25■□□□□ 0.19
TMEM170A-205ENST00000568559 NUTM2FA1L443 756 aa16.25■□□□□ 0.19
TMEM170A-205ENST00000568559 ATP10AO60312 1499 aa16.24■□□□□ 0.19
TMEM170A-205ENST00000568559 ABCA9Q8IUA7 1624 aa16.23■□□□□ 0.19
TMEM170A-205ENST00000568559 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
TMEM170A-205ENST00000568559 HDGFL2Q7Z4V5 671 aaPredicted RBP16.23■□□□□ 0.19
TMEM170A-205ENST00000568559 MORC1Q86VD1 984 aa16.23■□□□□ 0.19
TMEM170A-205ENST00000568559 DNAJC5Q9H3Z4 198 aa16.22■□□□□ 0.19
TMEM170A-205ENST00000568559 THEMISQ8N1K5 641 aaPredicted RBP16.22■□□□□ 0.19
TMEM170A-205ENST00000568559 MLH3Q9UHC1 1453 aa16.21■□□□□ 0.19
TMEM170A-205ENST00000568559 CFAP53Q96M91 514 aa16.21■□□□□ 0.19
TMEM170A-205ENST00000568559 RALBP1Q15311 655 aa16.2■□□□□ 0.18
TMEM170A-205ENST00000568559 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
TMEM170A-205ENST00000568559 C11orf95C9JLR9 678 aaPredicted RBP16.19■□□□□ 0.18
TMEM170A-205ENST00000568559 NOS1P29475 1434 aa16.19■□□□□ 0.18
TMEM170A-205ENST00000568559 CANXP27824 592 aaKnown RBP16.18■□□□□ 0.18
TMEM170A-205ENST00000568559 ZFYVE16Q7Z3T8 1539 aa16.18■□□□□ 0.18
TMEM170A-205ENST00000568559 LMOD2Q6P5Q4 547 aa16.18■□□□□ 0.18
TMEM170A-205ENST00000568559 TERF2IPQ9NYB0 399 aa16.18■□□□□ 0.18
TMEM170A-205ENST00000568559 SOX12O15370 315 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms