RNA–Protein interactions for RNA: ENST00000568400.5

TMEM87A-211, Transcript of transmembrane protein 87A, humanhuman

TSL 3

Gene TMEM87A, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-211ENST00000568400 FOSBP53539 338 aa9.06□□□□□ -0.96
TMEM87A-211ENST00000568400 UPF1Q92900 1129 aaKnown RBP eCLIP9.06□□□□□ -0.96
TMEM87A-211ENST00000568400 NBPF3Q9H094 633 aa9.05□□□□□ -0.96
TMEM87A-211ENST00000568400 RIMBP3CA6NJZ7 1639 aa9.05□□□□□ -0.96
TMEM87A-211ENST00000568400 RIMBP3BA6NNM3 1639 aa9.05□□□□□ -0.96
TMEM87A-211ENST00000568400 RIMBP3Q9UFD9 1639 aa9.05□□□□□ -0.96
TMEM87A-211ENST00000568400 WDR62O43379 1518 aa9.02□□□□□ -0.97
TMEM87A-211ENST00000568400 LCE2BO14633 110 aa9□□□□□ -0.97
TMEM87A-211ENST00000568400 HS6ST3Q8IZP7 471 aa9□□□□□ -0.97
TMEM87A-211ENST00000568400 ANKK1Q8NFD2 765 aa8.99□□□□□ -0.97
TMEM87A-211ENST00000568400 JPH4Q96JJ6 628 aa8.99□□□□□ -0.97
TMEM87A-211ENST00000568400 ADAM33Q9BZ11 813 aa8.99□□□□□ -0.97
TMEM87A-211ENST00000568400 SMARCA4P51532 1647 aa8.98□□□□□ -0.97
TMEM87A-211ENST00000568400 ZDHHC16Q969W1 377 aa8.98□□□□□ -0.97
TMEM87A-211ENST00000568400 BCAMP50895 628 aa8.97□□□□□ -0.97
TMEM87A-211ENST00000568400 LAPTM4AQ15012 233 aa8.97□□□□□ -0.97
TMEM87A-211ENST00000568400 MRC2Q9UBG0 1479 aa8.96□□□□□ -0.97
TMEM87A-211ENST00000568400 ANO8Q9HCE9 1232 aaPredicted RBP8.96□□□□□ -0.98
TMEM87A-211ENST00000568400 PDS5BQ9NTI5 1447 aa8.96□□□□□ -0.98
TMEM87A-211ENST00000568400 PEG3Q9GZU2 1588 aa8.95□□□□□ -0.98
TMEM87A-211ENST00000568400 TRAF7Q6Q0C0 670 aa8.95□□□□□ -0.98
TMEM87A-211ENST00000568400 RABGEF1Q9UJ41 708 aa8.95□□□□□ -0.98
TMEM87A-211ENST00000568400 ARHGEF11O15085 1522 aa8.95□□□□□ -0.98
TMEM87A-211ENST00000568400 KCNC4Q03721 635 aa8.94□□□□□ -0.98
TMEM87A-211ENST00000568400 SOWAHBA6NEL2 793 aa8.93□□□□□ -0.98
TMEM87A-211ENST00000568400 CHGAP10645 457 aaKnown RBP8.93□□□□□ -0.98
TMEM87A-211ENST00000568400 PPP1R15BQ5SWA1 713 aa8.93□□□□□ -0.98
TMEM87A-211ENST00000568400 NYAP1Q6ZVC0 841 aa8.93□□□□□ -0.98
TMEM87A-211ENST00000568400 BAZ1BQ9UIG0 1483 aaKnown RBP8.93□□□□□ -0.98
TMEM87A-211ENST00000568400 PPP1R3GB7ZBB8 358 aa8.92□□□□□ -0.98
TMEM87A-211ENST00000568400 EVI5O60447 810 aa8.92□□□□□ -0.98
TMEM87A-211ENST00000568400 GFRA3O60609 400 aa8.92□□□□□ -0.98
TMEM87A-211ENST00000568400 PROX2Q3B8N5 592 aa8.92□□□□□ -0.98
TMEM87A-211ENST00000568400 CRISPLD2Q9H0B8 497 aa8.92□□□□□ -0.98
TMEM87A-211ENST00000568400 RYDENQ9NUL5 291 aaKnown RBP8.9□□□□□ -0.98
TMEM87A-211ENST00000568400 WBP1LQ9NX94 342 aa8.9□□□□□ -0.98
TMEM87A-211ENST00000568400 LAPTM4BQ86VI4 370 aa8.89□□□□□ -0.99
TMEM87A-211ENST00000568400 COL9A1P20849 921 aa8.88□□□□□ -0.99
TMEM87A-211ENST00000568400 ZFRQ96KR1 1074 aaKnown RBP8.88□□□□□ -0.99
TMEM87A-211ENST00000568400 CADPSQ9ULU8 1353 aa8.86□□□□□ -0.99
TMEM87A-211ENST00000568400 ARAP1Q96P48 1450 aa8.84□□□□□ -0.99
TMEM87A-211ENST00000568400 KIAA1468Q9P260 1216 aa8.84□□□□□ -0.99
TMEM87A-211ENST00000568400 PCDHGA10Q9Y5H3 936 aa8.84□□□□□ -0.99
TMEM87A-211ENST00000568400 NRG2O14511 850 aaPredicted RBP8.83□□□□□ -1
TMEM87A-211ENST00000568400 NCKAP5LQ9HCH0 1330 aa8.82□□□□□ -1
TMEM87A-211ENST00000568400 NKX1-1Q15270 411 aaPredicted RBP8.82□□□□□ -1
TMEM87A-211ENST00000568400 MAP3K9P80192 1104 aa8.81□□□□□ -1
TMEM87A-211ENST00000568400 SEPT9Q9UHD8 586 aaPredicted RBP8.81□□□□□ -1
TMEM87A-211ENST00000568400 TSR3Q9UJK0 312 aaKnown RBP8.81□□□□□ -1
TMEM87A-211ENST00000568400 PDE4AP27815 886 aa8.8□□□□□ -1
TMEM87A-211ENST00000568400 PRKD2Q9BZL6 878 aa8.8□□□□□ -1
TMEM87A-211ENST00000568400 CEP164Q9UPV0 1460 aa8.8□□□□□ -1
TMEM87A-211ENST00000568400 ZNF787Q6DD87 383 aa8.79□□□□□ -1
TMEM87A-211ENST00000568400 CYB5RLQ6IPT4 315 aa8.79□□□□□ -1
TMEM87A-211ENST00000568400 HPS5Q9UPZ3 1129 aa8.79□□□□□ -1
TMEM87A-211ENST00000568400 URB2Q14146 1524 aaKnown RBP8.79□□□□□ -1
TMEM87A-211ENST00000568400 ONECUT3O60422 494 aaPredicted RBP8.78□□□□□ -1
TMEM87A-211ENST00000568400 TYW1BQ6NUM6 668 aa8.78□□□□□ -1
TMEM87A-211ENST00000568400 FBXW7Q969H0 707 aa8.78□□□□□ -1
TMEM87A-211ENST00000568400 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.78□□□□□ -1
TMEM87A-211ENST00000568400 LRCH3Q96II8 777 aa8.77□□□□□ -1.01
TMEM87A-211ENST00000568400 MROH2BQ7Z745 1585 aa8.77□□□□□ -1.01
TMEM87A-211ENST00000568400 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1.01
TMEM87A-211ENST00000568400 ZNF608Q9ULD9 1512 aaPredicted RBP8.76□□□□□ -1.01
TMEM87A-211ENST00000568400 FAM98CQ17RN3 349 aaKnown RBP8.76□□□□□ -1.01
TMEM87A-211ENST00000568400 PHF14O94880 888 aa8.75□□□□□ -1.01
TMEM87A-211ENST00000568400 ZNF775Q96BV0 537 aaPredicted RBP8.75□□□□□ -1.01
TMEM87A-211ENST00000568400 TRIM6-TRIM34B2RNG4 842 aa8.74□□□□□ -1.01
TMEM87A-211ENST00000568400 DDX27Q96GQ7 796 aaKnown RBP8.74□□□□□ -1.01
TMEM87A-211ENST00000568400 LARP6Q9BRS8 491 aaKnown RBP8.74□□□□□ -1.01
TMEM87A-211ENST00000568400 EMILIN3Q9NT22 766 aa8.74□□□□□ -1.01
TMEM87A-211ENST00000568400 V9GY48 417 aaPredicted RBP8.73□□□□□ -1.01
TMEM87A-211ENST00000568400 CHD1O14646 1710 aa8.73□□□□□ -1.01
TMEM87A-211ENST00000568400 TJAP1Q5JTD0 557 aa8.72□□□□□ -1.01
TMEM87A-211ENST00000568400 C6orf132Q5T0Z8 1188 aa8.72□□□□□ -1.01
TMEM87A-211ENST00000568400 GTPBP6O43824 516 aaPredicted RBP8.71□□□□□ -1.02
TMEM87A-211ENST00000568400 PPP1R18Q6NYC8 613 aa8.71□□□□□ -1.02
TMEM87A-211ENST00000568400 RSF1Q96T23 1441 aaPredicted RBP8.7□□□□□ -1.02
TMEM87A-211ENST00000568400 CFTRP13569 1480 aa8.7□□□□□ -1.02
TMEM87A-211ENST00000568400 PPP4CP60510 307 aa8.69□□□□□ -1.02
TMEM87A-211ENST00000568400 MFSD10Q14728 455 aa8.69□□□□□ -1.02
TMEM87A-211ENST00000568400 PDZRN3Q9UPQ7 1066 aa8.69□□□□□ -1.02
TMEM87A-211ENST00000568400 EIF4G3O43432 1585 aaKnown RBP8.69□□□□□ -1.02
TMEM87A-211ENST00000568400 MTRQ99707 1265 aa8.67□□□□□ -1.02
TMEM87A-211ENST00000568400 EPAS1Q99814 870 aa8.67□□□□□ -1.02
TMEM87A-211ENST00000568400 IL21Q9HBE4 155 aa8.66□□□□□ -1.02
TMEM87A-211ENST00000568400 IFT140Q96RY7 1462 aa8.65□□□□□ -1.02
TMEM87A-211ENST00000568400 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.65□□□□□ -1.02
TMEM87A-211ENST00000568400 RBM33Q96EV2 1170 aaKnown RBP8.64□□□□□ -1.03
TMEM87A-211ENST00000568400 CLASP1Q7Z460 1538 aa8.64□□□□□ -1.03
TMEM87A-211ENST00000568400 WIZO95785 1651 aa8.63□□□□□ -1.03
TMEM87A-211ENST00000568400 PACS2Q86VP3 889 aa8.62□□□□□ -1.03
TMEM87A-211ENST00000568400 ZNF516Q92618 1163 aa8.62□□□□□ -1.03
TMEM87A-211ENST00000568400 TSKSQ9UJT2 592 aa8.62□□□□□ -1.03
TMEM87A-211ENST00000568400 PRDM2Q13029 1718 aa8.61□□□□□ -1.03
TMEM87A-211ENST00000568400 SAMD7Q7Z3H4 446 aa8.61□□□□□ -1.03
TMEM87A-211ENST00000568400 TARBP1Q13395 1621 aaKnown RBP8.6□□□□□ -1.03
TMEM87A-211ENST00000568400 SMAPO00193 183 aa8.57□□□□□ -1.04
TMEM87A-211ENST00000568400 NKX2-3Q8TAU0 364 aa8.57□□□□□ -1.04
TMEM87A-211ENST00000568400 TOPBP1Q92547 1522 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms