RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
UBFD1-207ENST00000567212 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBFD1-207ENST00000567212 MAP7D2Q96T17 732 aa16.56■□□□□ 0.24
UBFD1-207ENST00000567212 TOP2AP11388 1531 aaKnown RBP16.56■□□□□ 0.24
UBFD1-207ENST00000567212 CUX2O14529 1486 aa16.56■□□□□ 0.24
UBFD1-207ENST00000567212 TULP1O00294 542 aaPredicted RBP16.55■□□□□ 0.24
UBFD1-207ENST00000567212 CSPP1Q1MSJ5 1256 aa16.55■□□□□ 0.24
UBFD1-207ENST00000567212 MCTP1Q6DN14 999 aa16.54■□□□□ 0.24
UBFD1-207ENST00000567212 ZHX1Q9UKY1 873 aaPredicted RBP16.54■□□□□ 0.24
UBFD1-207ENST00000567212 ST20-MTHFSA0A0A6YYL1 179 aa16.53■□□□□ 0.24
UBFD1-207ENST00000567212 CHMP3Q9Y3E7 222 aa16.53■□□□□ 0.24
UBFD1-207ENST00000567212 ATAD2BQ9ULI0 1458 aa16.53■□□□□ 0.24
UBFD1-207ENST00000567212 CCAR2Q8N163 923 aaKnown RBP16.53■□□□□ 0.24
UBFD1-207ENST00000567212 IPO8O15397 1037 aaKnown RBP16.53■□□□□ 0.24
UBFD1-207ENST00000567212 SMARCA4P51532 1647 aa16.52■□□□□ 0.23
UBFD1-207ENST00000567212 C22orf23Q9BZE7 217 aa16.51■□□□□ 0.23
UBFD1-207ENST00000567212 MYBBP1AQ9BQG0 1328 aaKnown RBP16.51■□□□□ 0.23
UBFD1-207ENST00000567212 ANKRD45Q5TZF3 282 aa16.51■□□□□ 0.23
UBFD1-207ENST00000567212 CARMIL1Q5VZK9 1371 aa16.5■□□□□ 0.23
UBFD1-207ENST00000567212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.5■□□□□ 0.23
UBFD1-207ENST00000567212 ST18O60284 1047 aa16.5■□□□□ 0.23
UBFD1-207ENST00000567212 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
UBFD1-207ENST00000567212 GRPEL1Q9HAV7 217 aa16.5■□□□□ 0.23
UBFD1-207ENST00000567212 CAVIN1Q6NZI2 390 aaKnown RBP16.49■□□□□ 0.23
UBFD1-207ENST00000567212 A0A0G2JS52 829 aa16.49■□□□□ 0.23
UBFD1-207ENST00000567212 TRIM6-TRIM34B2RNG4 842 aa16.49■□□□□ 0.23
UBFD1-207ENST00000567212 PHF14O94880 888 aa16.49■□□□□ 0.23
UBFD1-207ENST00000567212 APAF1O14727 1248 aa16.48■□□□□ 0.23
UBFD1-207ENST00000567212 WASHC2AQ641Q2 1341 aa16.48■□□□□ 0.23
UBFD1-207ENST00000567212 SAFB2Q14151 953 aaKnown RBP eCLIP16.48■□□□□ 0.23
UBFD1-207ENST00000567212 ESF1Q9H501 851 aaKnown RBP16.48■□□□□ 0.23
UBFD1-207ENST00000567212 UQCRHLA0A096LP55 91 aa16.48■□□□□ 0.23
UBFD1-207ENST00000567212 UQCRHP07919 91 aa16.48■□□□□ 0.23
UBFD1-207ENST00000567212 MTERF4Q7Z6M4 381 aaKnown RBP16.47■□□□□ 0.23
UBFD1-207ENST00000567212 C11orf95C9JLR9 678 aaPredicted RBP16.47■□□□□ 0.23
UBFD1-207ENST00000567212 APPP05067 770 aa16.46■□□□□ 0.23
UBFD1-207ENST00000567212 GNL2Q13823 731 aaKnown RBP16.46■□□□□ 0.23
UBFD1-207ENST00000567212 PANK1Q8TE04 598 aa16.46■□□□□ 0.23
UBFD1-207ENST00000567212 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.23
UBFD1-207ENST00000567212 GOLGA6L1Q8N7Z2 621 aa16.46■□□□□ 0.23
UBFD1-207ENST00000567212 NPHP1O15259 732 aa16.45■□□□□ 0.22
UBFD1-207ENST00000567212 ELL2O00472 640 aaPredicted RBP16.45■□□□□ 0.22
UBFD1-207ENST00000567212 PANK3Q9H999 370 aa16.45■□□□□ 0.22
UBFD1-207ENST00000567212 ROCK2O75116 1388 aaKnown RBP16.45■□□□□ 0.22
UBFD1-207ENST00000567212 CGNL1Q0VF96 1302 aa16.44■□□□□ 0.22
UBFD1-207ENST00000567212 IFT57Q9NWB7 429 aa16.43■□□□□ 0.22
UBFD1-207ENST00000567212 HTATSF1O43719 755 aaKnown RBP16.43■□□□□ 0.22
UBFD1-207ENST00000567212 C14orf37Q86TY3 774 aa16.43■□□□□ 0.22
UBFD1-207ENST00000567212 SOX12O15370 315 aa16.43■□□□□ 0.22
UBFD1-207ENST00000567212 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
UBFD1-207ENST00000567212 CFAP44Q96MT7 982 aa16.43■□□□□ 0.22
UBFD1-207ENST00000567212 LNPKQ9C0E8 428 aa16.42■□□□□ 0.22
UBFD1-207ENST00000567212 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
UBFD1-207ENST00000567212 CBX1P83916 185 aa16.42■□□□□ 0.22
UBFD1-207ENST00000567212 MCM4P33991 863 aa16.41■□□□□ 0.22
UBFD1-207ENST00000567212 KIF15Q9NS87 1388 aa16.41■□□□□ 0.22
UBFD1-207ENST00000567212 KIF7Q2M1P5 1343 aa16.41■□□□□ 0.22
UBFD1-207ENST00000567212 CCDC173Q0VFZ6 552 aa16.39■□□□□ 0.21
UBFD1-207ENST00000567212 HSP90B1P14625 803 aaKnown RBP16.39■□□□□ 0.21
UBFD1-207ENST00000567212 PDCL3Q9H2J4 239 aa16.39■□□□□ 0.21
UBFD1-207ENST00000567212 PRPF40AO75400 957 aaKnown RBP16.38■□□□□ 0.21
UBFD1-207ENST00000567212 PDE4CQ08493 712 aa16.38■□□□□ 0.21
UBFD1-207ENST00000567212 CCDC39Q9UFE4 941 aa16.38■□□□□ 0.21
UBFD1-207ENST00000567212 NOC3LQ8WTT2 800 aaKnown RBP16.38■□□□□ 0.21
UBFD1-207ENST00000567212 ARHGAP35Q9NRY4 1499 aa16.38■□□□□ 0.21
UBFD1-207ENST00000567212 BECN2A8MW95 431 aa16.38■□□□□ 0.21
UBFD1-207ENST00000567212 GOLGA6L19H0YKK7 550 aa16.37■□□□□ 0.21
UBFD1-207ENST00000567212 CREBRFQ8IUR6 639 aa16.37■□□□□ 0.21
UBFD1-207ENST00000567212 AEBP1Q8IUX7 1158 aa16.37■□□□□ 0.21
UBFD1-207ENST00000567212 DIAPH3Q9NSV4 1193 aa16.37■□□□□ 0.21
UBFD1-207ENST00000567212 SLC4A10Q6U841 1118 aa16.37■□□□□ 0.21
UBFD1-207ENST00000567212 TRERF1Q96PN7 1200 aa16.36■□□□□ 0.21
UBFD1-207ENST00000567212 TEX35Q5T0J7 233 aa16.36■□□□□ 0.21
UBFD1-207ENST00000567212 CCDC7Q96M83 1385 aa16.36■□□□□ 0.21
UBFD1-207ENST00000567212 KIF16BQ96L93 1317 aa16.36■□□□□ 0.21
UBFD1-207ENST00000567212 ERICH4A6NGS2 130 aa16.36■□□□□ 0.21
UBFD1-207ENST00000567212 XPCQ01831 940 aaPredicted RBP16.36■□□□□ 0.21
UBFD1-207ENST00000567212 RILPL2Q969X0 211 aa16.36■□□□□ 0.21
UBFD1-207ENST00000567212 FMN1Q68DA7 1419 aa16.35■□□□□ 0.21
UBFD1-207ENST00000567212 HOMER1Q86YM7 354 aa16.35■□□□□ 0.21
UBFD1-207ENST00000567212 CCDC66A2RUB6 948 aa16.35■□□□□ 0.21
UBFD1-207ENST00000567212 E9PSI1 815 aa16.35■□□□□ 0.21
UBFD1-207ENST00000567212 ZKSCAN2Q63HK3 967 aa16.35■□□□□ 0.21
UBFD1-207ENST00000567212 FBXW7Q969H0 707 aa16.35■□□□□ 0.21
UBFD1-207ENST00000567212 SKIDA1Q1XH10 827 aa16.34■□□□□ 0.21
UBFD1-207ENST00000567212 BBXQ8WY36 941 aaPredicted RBP16.34■□□□□ 0.21
UBFD1-207ENST00000567212 CGNQ9P2M7 1197 aaKnown RBP16.34■□□□□ 0.21
UBFD1-207ENST00000567212 FHAD1B1AJZ9 1412 aa16.34■□□□□ 0.21
UBFD1-207ENST00000567212 NUCB2P80303 420 aa16.33■□□□□ 0.2
UBFD1-207ENST00000567212 ZSCAN30Q86W11 494 aa16.33■□□□□ 0.2
UBFD1-207ENST00000567212 SPC24Q8NBT2 197 aa16.33■□□□□ 0.2
UBFD1-207ENST00000567212 PANK2Q9BZ23 570 aa16.33■□□□□ 0.2
UBFD1-207ENST00000567212 SRPK2P78362 688 aaKnown RBP16.33■□□□□ 0.2
UBFD1-207ENST00000567212 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
UBFD1-207ENST00000567212 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
UBFD1-207ENST00000567212 HMGN5P82970 282 aaKnown RBP16.32■□□□□ 0.2
UBFD1-207ENST00000567212 GPS2Q13227 327 aa16.31■□□□□ 0.2
UBFD1-207ENST00000567212 USP47Q96K76 1375 aa16.31■□□□□ 0.2
UBFD1-207ENST00000567212 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
UBFD1-207ENST00000567212 PDZRN3Q9UPQ7 1066 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms