RNA–Protein interactions for RNA: ENST00000566249.5

KARS-206, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-206ENST00000566249 GNPATO15228 680 aa12.49□□□□□ -0.41
KARS-206ENST00000566249 C6orf132Q5T0Z8 1188 aa12.49□□□□□ -0.41
KARS-206ENST00000566249 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
KARS-206ENST00000566249 NPDC1Q9NQX5 325 aaPredicted RBP12.48□□□□□ -0.41
KARS-206ENST00000566249 FECHP22830 423 aa12.45□□□□□ -0.42
KARS-206ENST00000566249 ERBB3P21860 1342 aa12.44□□□□□ -0.42
KARS-206ENST00000566249 EMP3P54852 163 aa12.44□□□□□ -0.42
KARS-206ENST00000566249 MARVELD3Q96A59 401 aa12.44□□□□□ -0.42
KARS-206ENST00000566249 BCL2L12Q9HB09 334 aa12.44□□□□□ -0.42
KARS-206ENST00000566249 MAP2K5Q13163 448 aa12.43□□□□□ -0.42
KARS-206ENST00000566249 AK7Q96M32 723 aa12.43□□□□□ -0.42
KARS-206ENST00000566249 VARS2Q5ST30 1063 aaKnown RBP12.42□□□□□ -0.42
KARS-206ENST00000566249 CERKQ8TCT0 537 aa12.42□□□□□ -0.42
KARS-206ENST00000566249 MINK1Q8N4C8 1332 aaPredicted RBP12.41□□□□□ -0.42
KARS-206ENST00000566249 PTPREP23469 700 aa12.41□□□□□ -0.42
KARS-206ENST00000566249 IRF6O14896 467 aa12.38□□□□□ -0.43
KARS-206ENST00000566249 COL9A1P20849 921 aa12.38□□□□□ -0.43
KARS-206ENST00000566249 CCDC102AQ96A19 550 aa12.38□□□□□ -0.43
KARS-206ENST00000566249 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
KARS-206ENST00000566249 PADI6Q6TGC4 694 aa12.36□□□□□ -0.43
KARS-206ENST00000566249 KCNK17Q96T54 332 aa12.36□□□□□ -0.43
KARS-206ENST00000566249 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
KARS-206ENST00000566249 TRIM66O15016 1216 aa12.34□□□□□ -0.43
KARS-206ENST00000566249 PRSS12P56730 875 aa12.34□□□□□ -0.43
KARS-206ENST00000566249 LCE2DQ5TA82 110 aaPredicted RBP12.34□□□□□ -0.43
KARS-206ENST00000566249 CDCA7LQ96GN5 454 aa12.34□□□□□ -0.43
KARS-206ENST00000566249 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
KARS-206ENST00000566249 RBM27Q9P2N5 1060 aaKnown RBP12.33□□□□□ -0.44
KARS-206ENST00000566249 BRPF1P55201 1214 aaPredicted RBP12.32□□□□□ -0.44
KARS-206ENST00000566249 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
KARS-206ENST00000566249 PSEN2P49810 448 aa12.31□□□□□ -0.44
KARS-206ENST00000566249 HS3ST6Q96QI5 342 aa12.31□□□□□ -0.44
KARS-206ENST00000566249 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
KARS-206ENST00000566249 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
KARS-206ENST00000566249 ARHGAP33O14559 1287 aa12.29□□□□□ -0.44
KARS-206ENST00000566249 PDE4DQ08499 809 aa12.29□□□□□ -0.44
KARS-206ENST00000566249 ZNF687Q8N1G0 1237 aa12.29□□□□□ -0.44
KARS-206ENST00000566249 AXIN2Q9Y2T1 843 aa12.29□□□□□ -0.44
KARS-206ENST00000566249 POTEB3A0JP26 581 aa12.28□□□□□ -0.44
KARS-206ENST00000566249 POTEBQ6S5H4 581 aa12.28□□□□□ -0.44
KARS-206ENST00000566249 POTEEQ6S8J3 1075 aa12.28□□□□□ -0.44
KARS-206ENST00000566249 FAM198AQ9UFP1 575 aa12.27□□□□□ -0.45
KARS-206ENST00000566249 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
KARS-206ENST00000566249 ADGRG1Q9Y653 693 aa12.27□□□□□ -0.45
KARS-206ENST00000566249 TRIM6-TRIM34B2RNG4 842 aa12.26□□□□□ -0.45
KARS-206ENST00000566249 PBX2P40425 430 aa12.26□□□□□ -0.45
KARS-206ENST00000566249 PROX2Q3B8N5 592 aa12.26□□□□□ -0.45
KARS-206ENST00000566249 OATP04181 439 aa12.25□□□□□ -0.45
KARS-206ENST00000566249 ZBED2Q9BTP6 218 aa12.25□□□□□ -0.45
KARS-206ENST00000566249 AMHR2Q16671 573 aa12.24□□□□□ -0.45
KARS-206ENST00000566249 GPBP1L1Q9HC44 474 aaPredicted RBP12.24□□□□□ -0.45
KARS-206ENST00000566249 DMRTA1Q5VZB9 504 aa12.23□□□□□ -0.45
KARS-206ENST00000566249 METTL3Q86U44 580 aaKnown RBP12.23□□□□□ -0.45
KARS-206ENST00000566249 PACS2Q86VP3 889 aa12.22□□□□□ -0.45
KARS-206ENST00000566249 PXYLP1Q8TE99 480 aa12.22□□□□□ -0.45
KARS-206ENST00000566249 RBM46Q8TBY0 533 aaKnown RBP12.21□□□□□ -0.45
KARS-206ENST00000566249 PHOX2BQ99453 314 aa12.21□□□□□ -0.45
KARS-206ENST00000566249 PLSCR2Q9NRY7 297 aa12.21□□□□□ -0.45
KARS-206ENST00000566249 NBPF26B4DH59 902 aa12.2□□□□□ -0.46
KARS-206ENST00000566249 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
KARS-206ENST00000566249 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
KARS-206ENST00000566249 NUDT18Q6ZVK8 323 aa12.2□□□□□ -0.46
KARS-206ENST00000566249 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
KARS-206ENST00000566249 C3orf80F5H4A9 247 aa12.19□□□□□ -0.46
KARS-206ENST00000566249 PARP9Q8IXQ6 854 aa12.19□□□□□ -0.46
KARS-206ENST00000566249 KDM4CQ9H3R0 1056 aa12.19□□□□□ -0.46
KARS-206ENST00000566249 KIAA1468Q9P260 1216 aa12.19□□□□□ -0.46
KARS-206ENST00000566249 NLRP7Q8WX94 980 aa12.18□□□□□ -0.46
KARS-206ENST00000566249 TATDN2Q93075 761 aa12.18□□□□□ -0.46
KARS-206ENST00000566249 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
KARS-206ENST00000566249 MDM2Q00987 491 aaPredicted RBP12.17□□□□□ -0.46
KARS-206ENST00000566249 EYA1Q99502 592 aa12.17□□□□□ -0.46
KARS-206ENST00000566249 SMAPO00193 183 aa12.16□□□□□ -0.46
KARS-206ENST00000566249 CLCN1P35523 988 aa12.15□□□□□ -0.46
KARS-206ENST00000566249 RABGEF1Q9UJ41 708 aa12.15□□□□□ -0.46
KARS-206ENST00000566249 VPS9D1Q9Y2B5 631 aa12.15□□□□□ -0.46
KARS-206ENST00000566249 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
KARS-206ENST00000566249 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
KARS-206ENST00000566249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
KARS-206ENST00000566249 RCCD1A6NED2 376 aa12.13□□□□□ -0.47
KARS-206ENST00000566249 GIGYF2Q6Y7W6 1299 aaKnown RBP12.13□□□□□ -0.47
KARS-206ENST00000566249 LSM11P83369 360 aaKnown RBP eCLIP12.12□□□□□ -0.47
KARS-206ENST00000566249 DNAJB2P25686 324 aa12.11□□□□□ -0.47
KARS-206ENST00000566249 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
KARS-206ENST00000566249 SEPT9Q9UHD8 586 aaPredicted RBP12.11□□□□□ -0.47
KARS-206ENST00000566249 TK2O00142 265 aa12.1□□□□□ -0.47
KARS-206ENST00000566249 TMEM132AQ24JP5 1023 aa12.09□□□□□ -0.47
KARS-206ENST00000566249 ADGRD1Q6QNK2 874 aa12.08□□□□□ -0.48
KARS-206ENST00000566249 MS4A1P11836 297 aa12.07□□□□□ -0.48
KARS-206ENST00000566249 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
KARS-206ENST00000566249 IL27Q8NEV9 243 aa12.07□□□□□ -0.48
KARS-206ENST00000566249 FAM117AQ9C073 453 aa12.07□□□□□ -0.48
KARS-206ENST00000566249 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
KARS-206ENST00000566249 TMEM134Q9H6X4 195 aa12.06□□□□□ -0.48
KARS-206ENST00000566249 DAXXQ9UER7 740 aaPredicted RBP12.06□□□□□ -0.48
KARS-206ENST00000566249 SSTR3P32745 418 aaPredicted RBP12.05□□□□□ -0.48
KARS-206ENST00000566249 FAM217BQ9NTX9 383 aaPredicted RBP12.05□□□□□ -0.48
KARS-206ENST00000566249 BHMG1C9JSJ3 638 aaPredicted RBP12.04□□□□□ -0.48
KARS-206ENST00000566249 FAM98CQ17RN3 349 aaKnown RBP12.04□□□□□ -0.48
KARS-206ENST00000566249 POTEGQ6S5H5 508 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms