RNA–Protein interactions for RNA: ENST00000564276.1

PKM-211, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-211ENST00000564276 ATP1B4Q9UN42 357 aaPredicted RBP14.99□□□□□ -0.01
PKM-211ENST00000564276 MED14O60244 1454 aa14.99□□□□□ -0.01
PKM-211ENST00000564276 CACNB1Q02641 598 aaPredicted RBP14.98□□□□□ -0.01
PKM-211ENST00000564276 PLXNC1O60486 1568 aa14.98□□□□□ -0.01
PKM-211ENST00000564276 FBXO31Q5XUX0 539 aaPredicted RBP14.97□□□□□ -0.01
PKM-211ENST00000564276 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
PKM-211ENST00000564276 TROQ12816 1431 aaPredicted RBP14.96□□□□□ -0.01
PKM-211ENST00000564276 ROBO1Q9Y6N7 1651 aa14.96□□□□□ -0.01
PKM-211ENST00000564276 TNRQ92752 1358 aa14.96□□□□□ -0.02
PKM-211ENST00000564276 FAM135BQ49AJ0 1406 aa14.94□□□□□ -0.02
PKM-211ENST00000564276 NCBP3Q53F19 620 aaKnown RBP14.94□□□□□ -0.02
PKM-211ENST00000564276 LRRIQ1Q96JM4 1722 aa14.94□□□□□ -0.02
PKM-211ENST00000564276 CDC42BPAQ5VT25 1732 aa14.93□□□□□ -0.02
PKM-211ENST00000564276 A2MP01023 1474 aa14.93□□□□□ -0.02
PKM-211ENST00000564276 ZC3H13Q5T200 1668 aaKnown RBP14.93□□□□□ -0.02
PKM-211ENST00000564276 CDK11AQ9UQ88 783 aaPredicted RBP14.92□□□□□ -0.02
PKM-211ENST00000564276 ATP7AQ04656 1500 aa14.92□□□□□ -0.02
PKM-211ENST00000564276 SPAG9O60271 1321 aaKnown RBP14.92□□□□□ -0.02
PKM-211ENST00000564276 UGGT1Q9NYU2 1555 aa14.91□□□□□ -0.02
PKM-211ENST00000564276 THEMISQ8N1K5 641 aaPredicted RBP14.91□□□□□ -0.02
PKM-211ENST00000564276 CLIP1P30622 1438 aa14.91□□□□□ -0.02
PKM-211ENST00000564276 SYCP2Q9BX26 1530 aa14.9□□□□□ -0.02
PKM-211ENST00000564276 PHLPP1O60346 1717 aa14.89□□□□□ -0.03
PKM-211ENST00000564276 KCNA4P22459 653 aa14.89□□□□□ -0.03
PKM-211ENST00000564276 INO80Q9ULG1 1556 aaPredicted RBP14.89□□□□□ -0.03
PKM-211ENST00000564276 FAM135AQ9P2D6 1515 aa14.88□□□□□ -0.03
PKM-211ENST00000564276 LRP6O75581 1613 aa14.88□□□□□ -0.03
PKM-211ENST00000564276 ZNF777Q9ULD5 760 aaPredicted RBP14.87□□□□□ -0.03
PKM-211ENST00000564276 HNRNPMP52272 730 aaKnown RBP eCLIP14.86□□□□□ -0.03
PKM-211ENST00000564276 SETBP1Q9Y6X0 1596 aa14.85□□□□□ -0.03
PKM-211ENST00000564276 PZPP20742 1482 aa14.85□□□□□ -0.03
PKM-211ENST00000564276 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
PKM-211ENST00000564276 ADGBQ8N7X0 1667 aa14.84□□□□□ -0.03
PKM-211ENST00000564276 ZNF772Q68DY9 489 aaPredicted RBP14.84□□□□□ -0.03
PKM-211ENST00000564276 JCADQ9P266 1359 aa14.84□□□□□ -0.03
PKM-211ENST00000564276 NLRP1Q9C000 1473 aa14.83□□□□□ -0.03
PKM-211ENST00000564276 RXRBP28702 533 aa14.83□□□□□ -0.04
PKM-211ENST00000564276 MIA2Q96PC5 1412 aa14.83□□□□□ -0.04
PKM-211ENST00000564276 MEX3CQ5U5Q3 659 aaKnown RBP14.82□□□□□ -0.04
PKM-211ENST00000564276 RBM33Q96EV2 1170 aaKnown RBP14.8□□□□□ -0.04
PKM-211ENST00000564276 COL16A1Q07092 1604 aaPredicted RBP14.79□□□□□ -0.04
PKM-211ENST00000564276 CFAP65Q6ZU64 1925 aaKnown RBP14.79□□□□□ -0.04
PKM-211ENST00000564276 KDM5DQ9BY66 1539 aa14.78□□□□□ -0.04
PKM-211ENST00000564276 CDK12Q9NYV4 1490 aaPredicted RBP14.78□□□□□ -0.04
PKM-211ENST00000564276 FMN1Q68DA7 1419 aa14.78□□□□□ -0.04
PKM-211ENST00000564276 TMEM94Q12767 1356 aa14.78□□□□□ -0.04
PKM-211ENST00000564276 MAP3K1Q13233 1512 aa14.77□□□□□ -0.04
PKM-211ENST00000564276 ZRANB1Q9UGI0 708 aa14.76□□□□□ -0.05
PKM-211ENST00000564276 RGS12O14924 1447 aa14.75□□□□□ -0.05
PKM-211ENST00000564276 UBR1Q8IWV7 1749 aa14.75□□□□□ -0.05
PKM-211ENST00000564276 LRRC9Q6ZRR7 1453 aa14.75□□□□□ -0.05
PKM-211ENST00000564276 SCAF11Q99590 1463 aaKnown RBP14.75□□□□□ -0.05
PKM-211ENST00000564276 LTKP29376 864 aa14.74□□□□□ -0.05
PKM-211ENST00000564276 SPATA31A6Q5VVP1 1343 aa14.72□□□□□ -0.05
PKM-211ENST00000564276 WASHC2CQ9Y4E1 1318 aa14.72□□□□□ -0.05
PKM-211ENST00000564276 KIF3BO15066 747 aa14.72□□□□□ -0.05
PKM-211ENST00000564276 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
PKM-211ENST00000564276 RNF216Q9NWF9 866 aaPredicted RBP14.72□□□□□ -0.05
PKM-211ENST00000564276 GPATCH8Q9UKJ3 1502 aaKnown RBP14.71□□□□□ -0.05
PKM-211ENST00000564276 SHPRHQ149N8 1683 aa14.71□□□□□ -0.05
PKM-211ENST00000564276 ARHGAP35Q9NRY4 1499 aa14.71□□□□□ -0.05
PKM-211ENST00000564276 NUTM2BA6NNL0 878 aaPredicted RBP14.71□□□□□ -0.05
PKM-211ENST00000564276 NUTM2EB1AL46 878 aaPredicted RBP14.71□□□□□ -0.05
PKM-211ENST00000564276 NUTM2DQ5VT03 806 aaPredicted RBP14.71□□□□□ -0.05
PKM-211ENST00000564276 NUTM2AQ8IVF1 878 aaPredicted RBP14.71□□□□□ -0.05
PKM-211ENST00000564276 CEP162Q5TB80 1403 aa14.7□□□□□ -0.06
PKM-211ENST00000564276 KIAA1107Q9UPP5 1409 aa14.7□□□□□ -0.06
PKM-211ENST00000564276 HOXD11P31277 338 aaPredicted RBP14.7□□□□□ -0.06
PKM-211ENST00000564276 EP400Q96L91 3159 aa14.69□□□□□ -0.06
PKM-211ENST00000564276 TXNDC2Q86VQ3 553 aa14.69□□□□□ -0.06
PKM-211ENST00000564276 DHX29Q7Z478 1369 aaKnown RBP14.69□□□□□ -0.06
PKM-211ENST00000564276 PROSER2Q86WR7 435 aaPredicted RBP14.68□□□□□ -0.06
PKM-211ENST00000564276 SLAIN2Q9P270 581 aa14.68□□□□□ -0.06
PKM-211ENST00000564276 NCOA2Q15596 1464 aa14.68□□□□□ -0.06
PKM-211ENST00000564276 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
PKM-211ENST00000564276 AFF2P51816 1311 aa14.67□□□□□ -0.06
PKM-211ENST00000564276 FGD6Q6ZV73 1430 aa14.67□□□□□ -0.06
PKM-211ENST00000564276 PLEKHH2Q8IVE3 1493 aa14.66□□□□□ -0.06
PKM-211ENST00000564276 ARHGAP23Q9P227 1491 aa14.66□□□□□ -0.06
PKM-211ENST00000564276 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
PKM-211ENST00000564276 SLIT1O75093 1534 aa14.65□□□□□ -0.06
PKM-211ENST00000564276 PRDM15P57071 1507 aaPredicted RBP14.65□□□□□ -0.06
PKM-211ENST00000564276 ERVK-7P63135 1459 aa14.64□□□□□ -0.07
PKM-211ENST00000564276 KCNA6P17658 529 aa14.64□□□□□ -0.07
PKM-211ENST00000564276 MSH6P52701 1360 aa14.63□□□□□ -0.07
PKM-211ENST00000564276 TRIM26Q12899 539 aaPredicted RBP14.63□□□□□ -0.07
PKM-211ENST00000564276 PCGF6Q9BYE7 350 aa14.63□□□□□ -0.07
PKM-211ENST00000564276 CFDP1Q9UEE9 299 aaPredicted RBP14.63□□□□□ -0.07
PKM-211ENST00000564276 ATAD2Q6PL18 1390 aa14.62□□□□□ -0.07
PKM-211ENST00000564276 RBM6P78332 1123 aaKnown RBP14.62□□□□□ -0.07
PKM-211ENST00000564276 CCDC18Q5T9S5 1454 aa14.62□□□□□ -0.07
PKM-211ENST00000564276 ZNF644Q9H582 1327 aaPredicted RBP14.62□□□□□ -0.07
PKM-211ENST00000564276 KDM5AP29375 1690 aaKnown RBP14.61□□□□□ -0.07
PKM-211ENST00000564276 QTRT2Q9H974 415 aaKnown RBP14.61□□□□□ -0.07
PKM-211ENST00000564276 AHDC1Q5TGY3 1603 aaPredicted RBP14.6□□□□□ -0.07
PKM-211ENST00000564276 DIP2AQ14689 1571 aa14.6□□□□□ -0.07
PKM-211ENST00000564276 LRP5O75197 1615 aa14.59□□□□□ -0.07
PKM-211ENST00000564276 RTEL1-TNFRSF6BF6WH68 1400 aa14.59□□□□□ -0.07
PKM-211ENST00000564276 MBD5Q9P267 1494 aa14.59□□□□□ -0.07
PKM-211ENST00000564276 SLC26A8Q96RN1 970 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms