RNA–Protein interactions for RNA: ENST00000564054.1

SH3GL3-206, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 2

Gene SH3GL3, Length 758 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-206ENST00000564054 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
SH3GL3-206ENST00000564054 COL9A1P20849 921 aa11.37□□□□□ -0.59
SH3GL3-206ENST00000564054 EPAS1Q99814 870 aa11.36□□□□□ -0.59
SH3GL3-206ENST00000564054 LAPTM4BQ86VI4 370 aa11.35□□□□□ -0.59
SH3GL3-206ENST00000564054 A0A0G2JS52 829 aa11.34□□□□□ -0.59
SH3GL3-206ENST00000564054 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
SH3GL3-206ENST00000564054 NISCHQ9Y2I1 1504 aa11.32□□□□□ -0.6
SH3GL3-206ENST00000564054 DPYSL4O14531 572 aa11.32□□□□□ -0.6
SH3GL3-206ENST00000564054 CAMK2BQ13554 666 aa11.32□□□□□ -0.6
SH3GL3-206ENST00000564054 C6orf132Q5T0Z8 1188 aa11.32□□□□□ -0.6
SH3GL3-206ENST00000564054 ONECUT3O60422 494 aaPredicted RBP11.31□□□□□ -0.6
SH3GL3-206ENST00000564054 BCAMP50895 628 aa11.31□□□□□ -0.6
SH3GL3-206ENST00000564054 IRX2Q9BZI1 471 aaPredicted RBP11.31□□□□□ -0.6
SH3GL3-206ENST00000564054 ZFRQ96KR1 1074 aaKnown RBP11.3□□□□□ -0.6
SH3GL3-206ENST00000564054 SOWAHBA6NEL2 793 aa11.29□□□□□ -0.6
SH3GL3-206ENST00000564054 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
SH3GL3-206ENST00000564054 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
SH3GL3-206ENST00000564054 TRIM6-TRIM34B2RNG4 842 aa11.27□□□□□ -0.61
SH3GL3-206ENST00000564054 SEPT9Q9UHD8 586 aaPredicted RBP11.27□□□□□ -0.61
SH3GL3-206ENST00000564054 DDX12PQ92771 950 aa11.26□□□□□ -0.61
SH3GL3-206ENST00000564054 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
SH3GL3-206ENST00000564054 BBXQ8WY36 941 aaPredicted RBP11.24□□□□□ -0.61
SH3GL3-206ENST00000564054 NBR1Q14596 966 aa11.23□□□□□ -0.61
SH3GL3-206ENST00000564054 FAM98CQ17RN3 349 aaKnown RBP11.23□□□□□ -0.61
SH3GL3-206ENST00000564054 WBP1LQ9NX94 342 aa11.22□□□□□ -0.61
SH3GL3-206ENST00000564054 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.22□□□□□ -0.61
SH3GL3-206ENST00000564054 MAP3K7O43318 606 aa11.21□□□□□ -0.61
SH3GL3-206ENST00000564054 LRCH3Q96II8 777 aa11.21□□□□□ -0.61
SH3GL3-206ENST00000564054 KCNC4Q03721 635 aa11.2□□□□□ -0.62
SH3GL3-206ENST00000564054 PACS2Q86VP3 889 aa11.2□□□□□ -0.62
SH3GL3-206ENST00000564054 EN1Q05925 392 aaPredicted RBP11.19□□□□□ -0.62
SH3GL3-206ENST00000564054 TSR3Q9UJK0 312 aaKnown RBP11.19□□□□□ -0.62
SH3GL3-206ENST00000564054 SPDYE16A6NNV3 312 aaPredicted RBP11.18□□□□□ -0.62
SH3GL3-206ENST00000564054 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
SH3GL3-206ENST00000564054 PDIA6Q15084 440 aa11.17□□□□□ -0.62
SH3GL3-206ENST00000564054 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
SH3GL3-206ENST00000564054 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
SH3GL3-206ENST00000564054 TSR1Q2NL82 804 aaKnown RBP11.15□□□□□ -0.62
SH3GL3-206ENST00000564054 PPP4CP60510 307 aa11.13□□□□□ -0.63
SH3GL3-206ENST00000564054 WDR70Q9NW82 654 aa11.13□□□□□ -0.63
SH3GL3-206ENST00000564054 TSKSQ9UJT2 592 aa11.13□□□□□ -0.63
SH3GL3-206ENST00000564054 E2F4Q16254 413 aa11.12□□□□□ -0.63
SH3GL3-206ENST00000564054 CERKQ8TCT0 537 aa11.11□□□□□ -0.63
SH3GL3-206ENST00000564054 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
SH3GL3-206ENST00000564054 GRXCR2A6NFK2 248 aa11.09□□□□□ -0.63
SH3GL3-206ENST00000564054 PRSS12P56730 875 aa11.09□□□□□ -0.63
SH3GL3-206ENST00000564054 SMAPO00193 183 aa11.07□□□□□ -0.64
SH3GL3-206ENST00000564054 Q6ZNB5 142 aa11.07□□□□□ -0.64
SH3GL3-206ENST00000564054 SAMD7Q7Z3H4 446 aa11.07□□□□□ -0.64
SH3GL3-206ENST00000564054 NBPF26B4DH59 902 aa11.06□□□□□ -0.64
SH3GL3-206ENST00000564054 HDGFP51858 240 aaKnown RBP11.06□□□□□ -0.64
SH3GL3-206ENST00000564054 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
SH3GL3-206ENST00000564054 TATDN2Q93075 761 aa11.04□□□□□ -0.64
SH3GL3-206ENST00000564054 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
SH3GL3-206ENST00000564054 RNF40O75150 1001 aa11.02□□□□□ -0.65
SH3GL3-206ENST00000564054 ARIH1Q9Y4X5 557 aaPredicted RBP11.02□□□□□ -0.65
SH3GL3-206ENST00000564054 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
SH3GL3-206ENST00000564054 LAPTM4AQ15012 233 aa11□□□□□ -0.65
SH3GL3-206ENST00000564054 FAM198AQ9UFP1 575 aa10.99□□□□□ -0.65
SH3GL3-206ENST00000564054 PRIM1P49642 420 aaKnown RBP10.98□□□□□ -0.65
SH3GL3-206ENST00000564054 AMER1Q5JTC6 1135 aaPredicted RBP10.98□□□□□ -0.65
SH3GL3-206ENST00000564054 TJAP1Q5JTD0 557 aa10.98□□□□□ -0.65
SH3GL3-206ENST00000564054 NUDT18Q6ZVK8 323 aa10.98□□□□□ -0.65
SH3GL3-206ENST00000564054 IL21Q9HBE4 155 aa10.98□□□□□ -0.65
SH3GL3-206ENST00000564054 NECTIN2Q92692 538 aa10.97□□□□□ -0.65
SH3GL3-206ENST00000564054 MTRQ99707 1265 aa10.97□□□□□ -0.65
SH3GL3-206ENST00000564054 RBM27Q9P2N5 1060 aaKnown RBP10.97□□□□□ -0.65
SH3GL3-206ENST00000564054 OSBPP22059 807 aa10.96□□□□□ -0.65
SH3GL3-206ENST00000564054 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.65
SH3GL3-206ENST00000564054 GFRA3O60609 400 aa10.94□□□□□ -0.66
SH3GL3-206ENST00000564054 SLC4A3P48751 1232 aa10.94□□□□□ -0.66
SH3GL3-206ENST00000564054 PRKD2Q9BZL6 878 aa10.93□□□□□ -0.66
SH3GL3-206ENST00000564054 C3orf80F5H4A9 247 aa10.92□□□□□ -0.66
SH3GL3-206ENST00000564054 PPP1R18Q6NYC8 613 aa10.92□□□□□ -0.66
SH3GL3-206ENST00000564054 SLF2Q8IX21 1173 aa10.9□□□□□ -0.66
SH3GL3-206ENST00000564054 APLP1P51693 650 aa10.89□□□□□ -0.67
SH3GL3-206ENST00000564054 PADI6Q6TGC4 694 aa10.89□□□□□ -0.67
SH3GL3-206ENST00000564054 SWT1Q5T5J6 900 aaKnown RBP10.88□□□□□ -0.67
SH3GL3-206ENST00000564054 ZNF516Q92618 1163 aa10.88□□□□□ -0.67
SH3GL3-206ENST00000564054 RTN4Q9NQC3 1192 aaKnown RBP10.88□□□□□ -0.67
SH3GL3-206ENST00000564054 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.88□□□□□ -0.67
SH3GL3-206ENST00000564054 V9GY48 417 aaPredicted RBP10.88□□□□□ -0.67
SH3GL3-206ENST00000564054 GGCXP38435 758 aa10.87□□□□□ -0.67
SH3GL3-206ENST00000564054 TRAF7Q6Q0C0 670 aa10.86□□□□□ -0.67
SH3GL3-206ENST00000564054 NRG2O14511 850 aaPredicted RBP10.84□□□□□ -0.67
SH3GL3-206ENST00000564054 COPS2P61201 443 aa10.84□□□□□ -0.67
SH3GL3-206ENST00000564054 TTC13Q8NBP0 860 aa10.84□□□□□ -0.67
SH3GL3-206ENST00000564054 PRR14Q9BWN1 585 aa10.84□□□□□ -0.67
SH3GL3-206ENST00000564054 NPDC1Q9NQX5 325 aaPredicted RBP10.84□□□□□ -0.67
SH3GL3-206ENST00000564054 NKX2-3Q8TAU0 364 aa10.81□□□□□ -0.68
SH3GL3-206ENST00000564054 ARHGEF1Q92888 912 aaKnown RBP10.78□□□□□ -0.68
SH3GL3-206ENST00000564054 EYA1Q99502 592 aa10.78□□□□□ -0.68
SH3GL3-206ENST00000564054 TMUB1Q9BVT8 246 aa10.78□□□□□ -0.68
SH3GL3-206ENST00000564054 PCDHB3Q9Y5E6 796 aa10.78□□□□□ -0.68
SH3GL3-206ENST00000564054 ZPR1O75312 459 aa10.77□□□□□ -0.69
SH3GL3-206ENST00000564054 PDZRN3Q9UPQ7 1066 aa10.77□□□□□ -0.69
SH3GL3-206ENST00000564054 DNAJB2P25686 324 aa10.75□□□□□ -0.69
SH3GL3-206ENST00000564054 RBM46Q8TBY0 533 aaKnown RBP10.75□□□□□ -0.69
SH3GL3-206ENST00000564054 LCE2BO14633 110 aa10.74□□□□□ -0.69
SH3GL3-206ENST00000564054 MLLT3P42568 568 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms