RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
LINC00254-201ENST00000563416 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
LINC00254-201ENST00000563416 C6orf132Q5T0Z8 1188 aa11.65□□□□□ -0.54
LINC00254-201ENST00000563416 AXIN2Q9Y2T1 843 aa11.63□□□□□ -0.55
LINC00254-201ENST00000563416 PPP1R3GB7ZBB8 358 aa11.62□□□□□ -0.55
LINC00254-201ENST00000563416 PSEN2P49810 448 aa11.61□□□□□ -0.55
LINC00254-201ENST00000563416 TSR1Q2NL82 804 aaKnown RBP11.61□□□□□ -0.55
LINC00254-201ENST00000563416 POTEEQ6S8J3 1075 aa11.61□□□□□ -0.55
LINC00254-201ENST00000563416 CERKQ8TCT0 537 aa11.61□□□□□ -0.55
LINC00254-201ENST00000563416 PRIM1P49642 420 aaKnown RBP11.6□□□□□ -0.55
LINC00254-201ENST00000563416 LSM11P83369 360 aaKnown RBP eCLIP11.6□□□□□ -0.55
LINC00254-201ENST00000563416 NUTM2FA1L443 756 aa11.59□□□□□ -0.55
LINC00254-201ENST00000563416 KRTAP3-3Q9BYR6 98 aa11.59□□□□□ -0.55
LINC00254-201ENST00000563416 KRTAP3-2Q9BYR7 98 aa11.59□□□□□ -0.55
LINC00254-201ENST00000563416 RBM26Q5T8P6 1007 aaKnown RBP11.58□□□□□ -0.56
LINC00254-201ENST00000563416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.56□□□□□ -0.56
LINC00254-201ENST00000563416 TK2O00142 265 aa11.55□□□□□ -0.56
LINC00254-201ENST00000563416 COL9A1P20849 921 aa11.55□□□□□ -0.56
LINC00254-201ENST00000563416 DMRTA1Q5VZB9 504 aa11.55□□□□□ -0.56
LINC00254-201ENST00000563416 ANKRD13DQ6ZTN6 518 aa11.55□□□□□ -0.56
LINC00254-201ENST00000563416 GPIHBP1Q8IV16 184 aa11.55□□□□□ -0.56
LINC00254-201ENST00000563416 SLC4A5Q9BY07 1137 aa11.55□□□□□ -0.56
LINC00254-201ENST00000563416 CDHR5Q9HBB8 845 aa11.55□□□□□ -0.56
LINC00254-201ENST00000563416 FCHSD2O94868 740 aa11.54□□□□□ -0.56
LINC00254-201ENST00000563416 LMOD2Q6P5Q4 547 aa11.54□□□□□ -0.56
LINC00254-201ENST00000563416 ZBED2Q9BTP6 218 aa11.54□□□□□ -0.56
LINC00254-201ENST00000563416 ONECUT3O60422 494 aaPredicted RBP11.51□□□□□ -0.57
LINC00254-201ENST00000563416 PTGDRQ13258 359 aa11.51□□□□□ -0.57
LINC00254-201ENST00000563416 ADGRD1Q6QNK2 874 aa11.51□□□□□ -0.57
LINC00254-201ENST00000563416 RBM27Q9P2N5 1060 aaKnown RBP11.51□□□□□ -0.57
LINC00254-201ENST00000563416 PRSS12P56730 875 aa11.5□□□□□ -0.57
LINC00254-201ENST00000563416 NPDC1Q9NQX5 325 aaPredicted RBP11.5□□□□□ -0.57
LINC00254-201ENST00000563416 VPS9D1Q9Y2B5 631 aa11.5□□□□□ -0.57
LINC00254-201ENST00000563416 TRIM6-TRIM34B2RNG4 842 aa11.49□□□□□ -0.57
LINC00254-201ENST00000563416 HIC1Q14526 733 aa11.49□□□□□ -0.57
LINC00254-201ENST00000563416 CDCA7LQ96GN5 454 aa11.49□□□□□ -0.57
LINC00254-201ENST00000563416 PROX2Q3B8N5 592 aa11.48□□□□□ -0.57
LINC00254-201ENST00000563416 STAC3Q96MF2 364 aa11.48□□□□□ -0.57
LINC00254-201ENST00000563416 PACS2Q86VP3 889 aa11.47□□□□□ -0.57
LINC00254-201ENST00000563416 RABGEF1Q9UJ41 708 aa11.47□□□□□ -0.57
LINC00254-201ENST00000563416 NBPF3Q9H094 633 aa11.46□□□□□ -0.57
LINC00254-201ENST00000563416 GNPATO15228 680 aa11.44□□□□□ -0.58
LINC00254-201ENST00000563416 PADI6Q6TGC4 694 aa11.44□□□□□ -0.58
LINC00254-201ENST00000563416 GPR37O15354 613 aa11.43□□□□□ -0.58
LINC00254-201ENST00000563416 KIAA1468Q9P260 1216 aa11.43□□□□□ -0.58
LINC00254-201ENST00000563416 TSKSQ9UJT2 592 aa11.43□□□□□ -0.58
LINC00254-201ENST00000563416 NBPF26B4DH59 902 aa11.42□□□□□ -0.58
LINC00254-201ENST00000563416 HRO43593 1189 aa11.42□□□□□ -0.58
LINC00254-201ENST00000563416 MRPL50Q8N5N7 158 aaKnown RBP11.41□□□□□ -0.58
LINC00254-201ENST00000563416 BHMG1C9JSJ3 638 aaPredicted RBP11.4□□□□□ -0.58
LINC00254-201ENST00000563416 TTC13Q8NBP0 860 aa11.4□□□□□ -0.58
LINC00254-201ENST00000563416 LAPTM4BQ86VI4 370 aa11.38□□□□□ -0.59
LINC00254-201ENST00000563416 SPNS2Q8IVW8 549 aa11.38□□□□□ -0.59
LINC00254-201ENST00000563416 ZC3H15Q8WU90 426 aaKnown RBP11.38□□□□□ -0.59
LINC00254-201ENST00000563416 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
LINC00254-201ENST00000563416 GOLGA8CPA6NN73 597 aa11.37□□□□□ -0.59
LINC00254-201ENST00000563416 TATDN2Q93075 761 aa11.37□□□□□ -0.59
LINC00254-201ENST00000563416 FAM198AQ9UFP1 575 aa11.37□□□□□ -0.59
LINC00254-201ENST00000563416 NUDT18Q6ZVK8 323 aa11.35□□□□□ -0.59
LINC00254-201ENST00000563416 MYT1LQ9UL68 1186 aa11.35□□□□□ -0.59
LINC00254-201ENST00000563416 OATP04181 439 aa11.34□□□□□ -0.59
LINC00254-201ENST00000563416 MAP2K5Q13163 448 aa11.34□□□□□ -0.59
LINC00254-201ENST00000563416 FAM98CQ17RN3 349 aaKnown RBP11.34□□□□□ -0.59
LINC00254-201ENST00000563416 RBM46Q8TBY0 533 aaKnown RBP11.34□□□□□ -0.59
LINC00254-201ENST00000563416 SEPT9Q9UHD8 586 aaPredicted RBP11.34□□□□□ -0.59
LINC00254-201ENST00000563416 ZMYND10O75800 440 aa11.33□□□□□ -0.6
LINC00254-201ENST00000563416 FECHP22830 423 aa11.33□□□□□ -0.6
LINC00254-201ENST00000563416 ADGRG1Q9Y653 693 aa11.33□□□□□ -0.6
LINC00254-201ENST00000563416 KRI1Q8N9T8 703 aaKnown RBP11.32□□□□□ -0.6
LINC00254-201ENST00000563416 MINK1Q8N4C8 1332 aaPredicted RBP11.32□□□□□ -0.6
LINC00254-201ENST00000563416 SMAPO00193 183 aa11.31□□□□□ -0.6
LINC00254-201ENST00000563416 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
LINC00254-201ENST00000563416 HDGFP51858 240 aaKnown RBP11.3□□□□□ -0.6
LINC00254-201ENST00000563416 ZFRQ96KR1 1074 aaKnown RBP11.29□□□□□ -0.6
LINC00254-201ENST00000563416 IRF6O14896 467 aa11.28□□□□□ -0.6
LINC00254-201ENST00000563416 ANKK1Q8NFD2 765 aa11.28□□□□□ -0.6
LINC00254-201ENST00000563416 RNF166Q96A37 237 aaPredicted RBP11.28□□□□□ -0.6
LINC00254-201ENST00000563416 EYA1Q99502 592 aa11.28□□□□□ -0.6
LINC00254-201ENST00000563416 C3orf80F5H4A9 247 aa11.27□□□□□ -0.61
LINC00254-201ENST00000563416 MMRN1Q13201 1228 aa11.27□□□□□ -0.61
LINC00254-201ENST00000563416 FAM161AQ3B820 660 aa11.27□□□□□ -0.61
LINC00254-201ENST00000563416 WNT2BQ93097 391 aa11.27□□□□□ -0.61
LINC00254-201ENST00000563416 DNAJB2P25686 324 aa11.26□□□□□ -0.61
LINC00254-201ENST00000563416 METTL3Q86U44 580 aaKnown RBP11.26□□□□□ -0.61
LINC00254-201ENST00000563416 PXYLP1Q8TE99 480 aa11.26□□□□□ -0.61
LINC00254-201ENST00000563416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.25□□□□□ -0.61
LINC00254-201ENST00000563416 SLC4A3P48751 1232 aa11.25□□□□□ -0.61
LINC00254-201ENST00000563416 KCTD12Q96CX2 325 aaKnown RBP11.25□□□□□ -0.61
LINC00254-201ENST00000563416 CCDC102AQ96A19 550 aa11.24□□□□□ -0.61
LINC00254-201ENST00000563416 RCCD1A6NED2 376 aa11.23□□□□□ -0.61
LINC00254-201ENST00000563416 LRCH3Q96II8 777 aa11.23□□□□□ -0.61
LINC00254-201ENST00000563416 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.23□□□□□ -0.61
LINC00254-201ENST00000563416 SAMD7Q7Z3H4 446 aa11.21□□□□□ -0.61
LINC00254-201ENST00000563416 SOWAHBA6NEL2 793 aa11.2□□□□□ -0.62
LINC00254-201ENST00000563416 THSD4Q6ZMP0 1018 aa11.2□□□□□ -0.62
LINC00254-201ENST00000563416 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
LINC00254-201ENST00000563416 SWT1Q5T5J6 900 aaKnown RBP11.19□□□□□ -0.62
LINC00254-201ENST00000563416 SLF2Q8IX21 1173 aa11.19□□□□□ -0.62
LINC00254-201ENST00000563416 NECTIN2Q92692 538 aa11.19□□□□□ -0.62
LINC00254-201ENST00000563416 AK7Q96M32 723 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms