RNA–Protein interactions for RNA: ENST00000563054.1

AC237221.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC237221.1, Length 2,947 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC237221.1-202ENST00000563054 RBM19Q9Y4C8 960 aaKnown RBP17.47■□□□□ 0.39
AC237221.1-202ENST00000563054 NEFLP07196 543 aa17.46■□□□□ 0.39
AC237221.1-202ENST00000563054 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
AC237221.1-202ENST00000563054 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
AC237221.1-202ENST00000563054 FAM9BQ8IZU0 186 aa17.44■□□□□ 0.38
AC237221.1-202ENST00000563054 PLCH2O75038 1416 aa17.44■□□□□ 0.38
AC237221.1-202ENST00000563054 MSH5O43196 834 aa17.44■□□□□ 0.38
AC237221.1-202ENST00000563054 ARHGEF5Q12774 1597 aa17.43■□□□□ 0.38
AC237221.1-202ENST00000563054 PRKRIP1Q9H875 184 aaPredicted RBP17.43■□□□□ 0.38
AC237221.1-202ENST00000563054 SPATA31E1Q6ZUB1 1445 aa17.43■□□□□ 0.38
AC237221.1-202ENST00000563054 USP47Q96K76 1375 aa17.42■□□□□ 0.38
AC237221.1-202ENST00000563054 SPAG9O60271 1321 aaKnown RBP17.42■□□□□ 0.38
AC237221.1-202ENST00000563054 DEKP35659 375 aaKnown RBP17.42■□□□□ 0.38
AC237221.1-202ENST00000563054 MYO5CQ9NQX4 1742 aa17.42■□□□□ 0.38
AC237221.1-202ENST00000563054 ST20-MTHFSA0A0A6YYL1 179 aa17.41■□□□□ 0.38
AC237221.1-202ENST00000563054 FAM135AQ9P2D6 1515 aa17.41■□□□□ 0.38
AC237221.1-202ENST00000563054 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
AC237221.1-202ENST00000563054 MRS2Q9HD23 443 aa17.4■□□□□ 0.38
AC237221.1-202ENST00000563054 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
AC237221.1-202ENST00000563054 CCDC144AA2RUR9 1427 aa17.37■□□□□ 0.37
AC237221.1-202ENST00000563054 BCORL1Q5H9F3 1711 aa17.36■□□□□ 0.37
AC237221.1-202ENST00000563054 KIF3BO15066 747 aa17.36■□□□□ 0.37
AC237221.1-202ENST00000563054 UHRF1BP1LA0JNW5 1464 aa17.35■□□□□ 0.37
AC237221.1-202ENST00000563054 ERICH6BQ5W0A0 696 aa17.34■□□□□ 0.37
AC237221.1-202ENST00000563054 PLA2R1Q13018 1463 aa17.34■□□□□ 0.37
AC237221.1-202ENST00000563054 SCAPERQ9BY12 1400 aa17.34■□□□□ 0.37
AC237221.1-202ENST00000563054 ASXL2Q76L83 1435 aa17.33■□□□□ 0.36
AC237221.1-202ENST00000563054 ROCK2O75116 1388 aaKnown RBP17.33■□□□□ 0.36
AC237221.1-202ENST00000563054 WDR7Q9Y4E6 1490 aa17.32■□□□□ 0.36
AC237221.1-202ENST00000563054 POLR1AO95602 1720 aaPredicted RBP17.32■□□□□ 0.36
AC237221.1-202ENST00000563054 FANCAO15360 1455 aa17.31■□□□□ 0.36
AC237221.1-202ENST00000563054 KDM5CP41229 1560 aa17.3■□□□□ 0.36
AC237221.1-202ENST00000563054 KDM5DQ9BY66 1539 aa17.29■□□□□ 0.36
AC237221.1-202ENST00000563054 PLEKHG5O94827 1062 aa17.29■□□□□ 0.36
AC237221.1-202ENST00000563054 ABCC1P33527 1531 aa17.29■□□□□ 0.36
AC237221.1-202ENST00000563054 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.29■□□□□ 0.36
AC237221.1-202ENST00000563054 DAXXQ9UER7 740 aaPredicted RBP17.28■□□□□ 0.36
AC237221.1-202ENST00000563054 CYB5RLQ6IPT4 315 aa17.28■□□□□ 0.36
AC237221.1-202ENST00000563054 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
AC237221.1-202ENST00000563054 DHX29Q7Z478 1369 aaKnown RBP17.27■□□□□ 0.35
AC237221.1-202ENST00000563054 PKNOX2Q96KN3 472 aa17.27■□□□□ 0.35
AC237221.1-202ENST00000563054 DUOX2Q9NRD8 1548 aa17.26■□□□□ 0.35
AC237221.1-202ENST00000563054 ADGRL1O94910 1474 aa17.25■□□□□ 0.35
AC237221.1-202ENST00000563054 RALGAPBQ86X10 1494 aa17.25■□□□□ 0.35
AC237221.1-202ENST00000563054 MAST1Q9Y2H9 1570 aa17.24■□□□□ 0.35
AC237221.1-202ENST00000563054 GGT6Q6P531 493 aa17.24■□□□□ 0.35
AC237221.1-202ENST00000563054 RAPGEF3O95398 923 aa17.24■□□□□ 0.35
AC237221.1-202ENST00000563054 UHRF1BP1Q6BDS2 1440 aa17.23■□□□□ 0.35
AC237221.1-202ENST00000563054 A2MP01023 1474 aa17.22■□□□□ 0.35
AC237221.1-202ENST00000563054 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
AC237221.1-202ENST00000563054 PLXNC1O60486 1568 aa17.21■□□□□ 0.35
AC237221.1-202ENST00000563054 ERBINQ96RT1 1412 aa17.21■□□□□ 0.35
AC237221.1-202ENST00000563054 PRAG1Q86YV5 1406 aa17.2■□□□□ 0.34
AC237221.1-202ENST00000563054 UNC13BO14795 1591 aa17.2■□□□□ 0.34
AC237221.1-202ENST00000563054 ZBED9Q6R2W3 1325 aa17.19■□□□□ 0.34
AC237221.1-202ENST00000563054 ZFYVE16Q7Z3T8 1539 aa17.18■□□□□ 0.34
AC237221.1-202ENST00000563054 CD109Q6YHK3 1445 aa17.17■□□□□ 0.34
AC237221.1-202ENST00000563054 IQGAP3Q86VI3 1631 aa17.17■□□□□ 0.34
AC237221.1-202ENST00000563054 CFAP65Q6ZU64 1925 aaKnown RBP17.17■□□□□ 0.34
AC237221.1-202ENST00000563054 ATP7AQ04656 1500 aa17.15■□□□□ 0.34
AC237221.1-202ENST00000563054 CC2D1BQ5T0F9 858 aaKnown RBP17.15■□□□□ 0.34
AC237221.1-202ENST00000563054 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
AC237221.1-202ENST00000563054 TMC1Q8TDI8 760 aa17.14■□□□□ 0.33
AC237221.1-202ENST00000563054 ABCA9Q8IUA7 1624 aa17.13■□□□□ 0.33
AC237221.1-202ENST00000563054 FANCIQ9NVI1 1328 aa17.13■□□□□ 0.33
AC237221.1-202ENST00000563054 KANK1Q14678 1352 aa17.13■□□□□ 0.33
AC237221.1-202ENST00000563054 DISP3Q9P2K9 1392 aa17.13■□□□□ 0.33
AC237221.1-202ENST00000563054 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
AC237221.1-202ENST00000563054 UGGT1Q9NYU2 1555 aa17.12■□□□□ 0.33
AC237221.1-202ENST00000563054 TESK2Q96S53 571 aa17.12■□□□□ 0.33
AC237221.1-202ENST00000563054 E9PCH4 1651 aa17.11■□□□□ 0.33
AC237221.1-202ENST00000563054 ATP10AO60312 1499 aa17.11■□□□□ 0.33
AC237221.1-202ENST00000563054 ARID4BQ4LE39 1312 aaPredicted RBP17.11■□□□□ 0.33
AC237221.1-202ENST00000563054 CFAP70Q5T0N1 1121 aa17.1■□□□□ 0.33
AC237221.1-202ENST00000563054 TRPM1Q7Z4N2 1603 aa17.1■□□□□ 0.33
AC237221.1-202ENST00000563054 MAGI2Q86UL8 1455 aa17.1■□□□□ 0.33
AC237221.1-202ENST00000563054 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
AC237221.1-202ENST00000563054 PANK3Q9H999 370 aa17.1■□□□□ 0.33
AC237221.1-202ENST00000563054 RTN4Q9NQC3 1192 aaKnown RBP17.1■□□□□ 0.33
AC237221.1-202ENST00000563054 IL27Q8NEV9 243 aa17.09■□□□□ 0.33
AC237221.1-202ENST00000563054 PODXL2Q9NZ53 605 aa17.09■□□□□ 0.33
AC237221.1-202ENST00000563054 PNISRQ8TF01 805 aaKnown RBP17.08■□□□□ 0.32
AC237221.1-202ENST00000563054 ADGRF5Q8IZF2 1346 aa17.08■□□□□ 0.32
AC237221.1-202ENST00000563054 WASHC2CQ9Y4E1 1318 aa17.06■□□□□ 0.32
AC237221.1-202ENST00000563054 ARAP3Q8WWN8 1544 aa17.06■□□□□ 0.32
AC237221.1-202ENST00000563054 TMF1P82094 1093 aa17.05■□□□□ 0.32
AC237221.1-202ENST00000563054 PPP4R2Q9NY27 417 aa17.05■□□□□ 0.32
AC237221.1-202ENST00000563054 INO80Q9ULG1 1556 aaPredicted RBP17.05■□□□□ 0.32
AC237221.1-202ENST00000563054 KIDINS220Q9ULH0 1771 aa17.04■□□□□ 0.32
AC237221.1-202ENST00000563054 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
AC237221.1-202ENST00000563054 FAM69CQ0P6D2 419 aa17.03■□□□□ 0.32
AC237221.1-202ENST00000563054 ZNF518AQ6AHZ1 1483 aa17.03■□□□□ 0.32
AC237221.1-202ENST00000563054 MYBBP1AQ9BQG0 1328 aaKnown RBP17.03■□□□□ 0.32
AC237221.1-202ENST00000563054 PER1O15534 1290 aaPredicted RBP17.02■□□□□ 0.32
AC237221.1-202ENST00000563054 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.31
AC237221.1-202ENST00000563054 TMEM132EQ6IEE7 984 aa17.01■□□□□ 0.31
AC237221.1-202ENST00000563054 NUDCQ9Y266 331 aa17.01■□□□□ 0.31
AC237221.1-202ENST00000563054 SMG6Q86US8 1419 aaKnown RBP17■□□□□ 0.31
AC237221.1-202ENST00000563054 PTPRTO14522 1441 aa17■□□□□ 0.31
AC237221.1-202ENST00000563054 POGZQ7Z3K3 1410 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms