RNA–Protein interactions for RNA: ENST00000560655.5

PCAT29-204, prostate cancer associated transcript 29, humanhuman

TSL 3

Gene PCAT29, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-204ENST00000560655 ABCC10Q5T3U5 1492 aa8.7□□□□□ -1.02
PCAT29-204ENST00000560655 DNMT1P26358 1616 aaKnown RBP8.7□□□□□ -1.02
PCAT29-204ENST00000560655 ATN1P54259 1190 aaPredicted RBP8.7□□□□□ -1.02
PCAT29-204ENST00000560655 MPHOSPH9Q99550 1183 aa8.7□□□□□ -1.02
PCAT29-204ENST00000560655 CFDP1Q9UEE9 299 aaPredicted RBP8.7□□□□□ -1.02
PCAT29-204ENST00000560655 SHROOM2Q13796 1616 aa8.69□□□□□ -1.02
PCAT29-204ENST00000560655 KIF14Q15058 1648 aa8.69□□□□□ -1.02
PCAT29-204ENST00000560655 CHD1O14646 1710 aa8.68□□□□□ -1.02
PCAT29-204ENST00000560655 ST18O60284 1047 aa8.68□□□□□ -1.02
PCAT29-204ENST00000560655 NPM1P06748 294 aaKnown RBP eCLIP8.68□□□□□ -1.02
PCAT29-204ENST00000560655 CAMSAP2Q08AD1 1489 aa8.68□□□□□ -1.02
PCAT29-204ENST00000560655 KDM5BQ9UGL1 1544 aa8.68□□□□□ -1.02
PCAT29-204ENST00000560655 NCOA1Q15788 1441 aa8.67□□□□□ -1.02
PCAT29-204ENST00000560655 TRIM52Q96A61 297 aa8.67□□□□□ -1.02
PCAT29-204ENST00000560655 ADGRL2O95490 1459 aa8.66□□□□□ -1.02
PCAT29-204ENST00000560655 TONSLQ96HA7 1378 aa8.66□□□□□ -1.02
PCAT29-204ENST00000560655 POTEFA5A3E0 1075 aa8.66□□□□□ -1.02
PCAT29-204ENST00000560655 ANKRD30BQ9BXX2 1392 aa8.65□□□□□ -1.02
PCAT29-204ENST00000560655 STAG3Q9UJ98 1225 aa8.65□□□□□ -1.02
PCAT29-204ENST00000560655 ITSN2Q9NZM3 1697 aa8.65□□□□□ -1.03
PCAT29-204ENST00000560655 ERCC6L2Q5T890 1561 aa8.65□□□□□ -1.03
PCAT29-204ENST00000560655 CENPBP07199 599 aaPredicted RBP8.64□□□□□ -1.03
PCAT29-204ENST00000560655 ZNF777Q9ULD5 760 aaPredicted RBP8.64□□□□□ -1.03
PCAT29-204ENST00000560655 CLASP1Q7Z460 1538 aa8.64□□□□□ -1.03
PCAT29-204ENST00000560655 CDC42BPAQ5VT25 1732 aa8.63□□□□□ -1.03
PCAT29-204ENST00000560655 PZPP20742 1482 aa8.63□□□□□ -1.03
PCAT29-204ENST00000560655 MBD5Q9P267 1494 aa8.63□□□□□ -1.03
PCAT29-204ENST00000560655 ANKRD30AQ9BXX3 1397 aa8.61□□□□□ -1.03
PCAT29-204ENST00000560655 SEC24BO95487 1268 aa8.61□□□□□ -1.03
PCAT29-204ENST00000560655 HNRNPMP52272 730 aaKnown RBP eCLIP8.61□□□□□ -1.03
PCAT29-204ENST00000560655 L3MBTL2Q969R5 705 aa8.61□□□□□ -1.03
PCAT29-204ENST00000560655 SHANK2Q9UPX8 1470 aa8.61□□□□□ -1.03
PCAT29-204ENST00000560655 ABCC2Q92887 1545 aa8.6□□□□□ -1.03
PCAT29-204ENST00000560655 UHRF1BP1LA0JNW5 1464 aa8.6□□□□□ -1.03
PCAT29-204ENST00000560655 HIRIP3Q9BW71 556 aaPredicted RBP8.6□□□□□ -1.03
PCAT29-204ENST00000560655 CROCC2H7BZ55 1655 aa8.59□□□□□ -1.03
PCAT29-204ENST00000560655 ADGBQ8N7X0 1667 aa8.59□□□□□ -1.03
PCAT29-204ENST00000560655 RPRD2Q5VT52 1461 aaKnown RBP8.59□□□□□ -1.03
PCAT29-204ENST00000560655 DDX10Q13206 875 aaKnown RBP8.59□□□□□ -1.03
PCAT29-204ENST00000560655 RSPH4AQ5TD94 716 aa8.59□□□□□ -1.03
PCAT29-204ENST00000560655 SLAIN1Q8ND83 568 aa8.59□□□□□ -1.03
PCAT29-204ENST00000560655 C9orf84Q5VXU9 1444 aa8.59□□□□□ -1.03
PCAT29-204ENST00000560655 ANKRD50Q9ULJ7 1429 aa8.59□□□□□ -1.03
PCAT29-204ENST00000560655 ARHGEF5Q12774 1597 aa8.59□□□□□ -1.03
PCAT29-204ENST00000560655 TSPY4P0CV99 314 aa8.58□□□□□ -1.04
PCAT29-204ENST00000560655 TSPY10P0CW01 314 aa8.58□□□□□ -1.04
PCAT29-204ENST00000560655 YTHDC1Q96MU7 727 aaKnown RBP8.58□□□□□ -1.04
PCAT29-204ENST00000560655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.58□□□□□ -1.04
PCAT29-204ENST00000560655 CDC42BPBQ9Y5S2 1711 aa8.57□□□□□ -1.04
PCAT29-204ENST00000560655 SAMD9LQ8IVG5 1584 aa8.57□□□□□ -1.04
PCAT29-204ENST00000560655 NBPF8Q3BBV2 869 aa8.57□□□□□ -1.04
PCAT29-204ENST00000560655 KIAA1107Q9UPP5 1409 aa8.56□□□□□ -1.04
PCAT29-204ENST00000560655 PREX2Q70Z35 1606 aa8.56□□□□□ -1.04
PCAT29-204ENST00000560655 COLQQ9Y215 455 aaPredicted RBP8.56□□□□□ -1.04
PCAT29-204ENST00000560655 TEX14Q8IWB6 1497 aa8.56□□□□□ -1.04
PCAT29-204ENST00000560655 HSPA5P11021 654 aaKnown RBP8.55□□□□□ -1.04
PCAT29-204ENST00000560655 PKD2Q13563 968 aa8.55□□□□□ -1.04
PCAT29-204ENST00000560655 GTF3C3Q9Y5Q9 886 aa8.55□□□□□ -1.04
PCAT29-204ENST00000560655 CCDC141Q6ZP82 1450 aa8.55□□□□□ -1.04
PCAT29-204ENST00000560655 TTC37Q6PGP7 1564 aa8.55□□□□□ -1.04
PCAT29-204ENST00000560655 PLCH2O75038 1416 aa8.54□□□□□ -1.04
PCAT29-204ENST00000560655 KDM5DQ9BY66 1539 aa8.54□□□□□ -1.04
PCAT29-204ENST00000560655 NUP155O75694 1391 aa8.54□□□□□ -1.04
PCAT29-204ENST00000560655 KIF15Q9NS87 1388 aa8.54□□□□□ -1.04
PCAT29-204ENST00000560655 KCNH8Q96L42 1107 aa8.54□□□□□ -1.04
PCAT29-204ENST00000560655 BMP2KQ9NSY1 1161 aaPredicted RBP8.54□□□□□ -1.04
PCAT29-204ENST00000560655 MAST1Q9Y2H9 1570 aa8.53□□□□□ -1.04
PCAT29-204ENST00000560655 ARHGEF12Q9NZN5 1544 aa8.53□□□□□ -1.04
PCAT29-204ENST00000560655 ZCCHC11Q5TAX3 1644 aaKnown RBP8.52□□□□□ -1.05
PCAT29-204ENST00000560655 C11orf95C9JLR9 678 aaPredicted RBP8.52□□□□□ -1.05
PCAT29-204ENST00000560655 MNX1P50219 401 aaPredicted RBP8.52□□□□□ -1.05
PCAT29-204ENST00000560655 EIF4G2P78344 907 aaKnown RBP eCLIP8.52□□□□□ -1.05
PCAT29-204ENST00000560655 TSPYL2Q9H2G4 693 aaPredicted RBP8.52□□□□□ -1.05
PCAT29-204ENST00000560655 WASHC2AQ641Q2 1341 aa8.52□□□□□ -1.05
PCAT29-204ENST00000560655 PLEKHH2Q8IVE3 1493 aa8.51□□□□□ -1.05
PCAT29-204ENST00000560655 ARHGAP5Q13017 1502 aa8.51□□□□□ -1.05
PCAT29-204ENST00000560655 SYCP2Q9BX26 1530 aa8.51□□□□□ -1.05
PCAT29-204ENST00000560655 CCER2I3L3R5 266 aa8.51□□□□□ -1.05
PCAT29-204ENST00000560655 EFCAB2Q5VUJ9 269 aa8.51□□□□□ -1.05
PCAT29-204ENST00000560655 SPATA31E1Q6ZUB1 1445 aa8.51□□□□□ -1.05
PCAT29-204ENST00000560655 MYO5CQ9NQX4 1742 aa8.49□□□□□ -1.05
PCAT29-204ENST00000560655 UHRF1BP1Q6BDS2 1440 aa8.48□□□□□ -1.05
PCAT29-204ENST00000560655 TRAPPC8Q9Y2L5 1435 aa8.48□□□□□ -1.05
PCAT29-204ENST00000560655 ANP32CO43423 234 aa8.48□□□□□ -1.05
PCAT29-204ENST00000560655 MARVELD3Q96A59 401 aa8.48□□□□□ -1.05
PCAT29-204ENST00000560655 TMEM121BQ9BXQ6 578 aaPredicted RBP8.48□□□□□ -1.05
PCAT29-204ENST00000560655 TRPC6Q9Y210 931 aa8.48□□□□□ -1.05
PCAT29-204ENST00000560655 ARAP3Q8WWN8 1544 aa8.47□□□□□ -1.05
PCAT29-204ENST00000560655 CCDC7Q96M83 1385 aa8.47□□□□□ -1.05
PCAT29-204ENST00000560655 PLA2R1Q13018 1463 aa8.46□□□□□ -1.05
PCAT29-204ENST00000560655 ABCC1P33527 1531 aa8.46□□□□□ -1.05
PCAT29-204ENST00000560655 FAM135AQ9P2D6 1515 aa8.46□□□□□ -1.05
PCAT29-204ENST00000560655 KIF12Q96FN5 646 aa8.46□□□□□ -1.06
PCAT29-204ENST00000560655 PLXNC1O60486 1568 aa8.46□□□□□ -1.06
PCAT29-204ENST00000560655 RTEL1-TNFRSF6BF6WH68 1400 aa8.46□□□□□ -1.06
PCAT29-204ENST00000560655 WDR7Q9Y4E6 1490 aa8.45□□□□□ -1.06
PCAT29-204ENST00000560655 DUOX2Q9NRD8 1548 aa8.45□□□□□ -1.06
PCAT29-204ENST00000560655 UNC13BO14795 1591 aa8.45□□□□□ -1.06
PCAT29-204ENST00000560655 TIE1P35590 1138 aa8.45□□□□□ -1.06
PCAT29-204ENST00000560655 MAGI2Q86UL8 1455 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms