RNA–Protein interactions for RNA: ENST00000559214.1

AC087477.3-201, humanhuman

TSL 4 BASIC

Gene AC087477.3, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087477.3-201ENST00000559214 CUX2O14529 1486 aa9.54□□□□□ -0.88
AC087477.3-201ENST00000559214 PDE4AP27815 886 aa9.54□□□□□ -0.88
AC087477.3-201ENST00000559214 ZNF454Q8N9F8 522 aa9.54□□□□□ -0.88
AC087477.3-201ENST00000559214 KCTD12Q96CX2 325 aaKnown RBP9.54□□□□□ -0.88
AC087477.3-201ENST00000559214 TOP2AP11388 1531 aaKnown RBP9.54□□□□□ -0.88
AC087477.3-201ENST00000559214 MFSD10Q14728 455 aa9.53□□□□□ -0.88
AC087477.3-201ENST00000559214 CCDC88BA6NC98 1476 aa9.53□□□□□ -0.88
AC087477.3-201ENST00000559214 JPH4Q96JJ6 628 aa9.51□□□□□ -0.89
AC087477.3-201ENST00000559214 ZBED2Q9BTP6 218 aa9.51□□□□□ -0.89
AC087477.3-201ENST00000559214 CFTRP13569 1480 aa9.5□□□□□ -0.89
AC087477.3-201ENST00000559214 EVI5O60447 810 aa9.49□□□□□ -0.89
AC087477.3-201ENST00000559214 KCNH8Q96L42 1107 aa9.49□□□□□ -0.89
AC087477.3-201ENST00000559214 FANCD2Q9BXW9 1451 aa9.48□□□□□ -0.89
AC087477.3-201ENST00000559214 LARP6Q9BRS8 491 aaKnown RBP9.48□□□□□ -0.89
AC087477.3-201ENST00000559214 ADAM33Q9BZ11 813 aa9.48□□□□□ -0.89
AC087477.3-201ENST00000559214 PTPREP23469 700 aa9.47□□□□□ -0.89
AC087477.3-201ENST00000559214 DDX27Q96GQ7 796 aaKnown RBP9.47□□□□□ -0.89
AC087477.3-201ENST00000559214 EMILIN3Q9NT22 766 aa9.47□□□□□ -0.89
AC087477.3-201ENST00000559214 KIF21AQ7Z4S6 1674 aa9.46□□□□□ -0.89
AC087477.3-201ENST00000559214 ZDHHC16Q969W1 377 aa9.46□□□□□ -0.9
AC087477.3-201ENST00000559214 THOC2Q8NI27 1593 aaKnown RBP9.46□□□□□ -0.9
AC087477.3-201ENST00000559214 STAC3Q96MF2 364 aa9.45□□□□□ -0.9
AC087477.3-201ENST00000559214 MRC2Q9UBG0 1479 aa9.45□□□□□ -0.9
AC087477.3-201ENST00000559214 CEP164Q9UPV0 1460 aa9.45□□□□□ -0.9
AC087477.3-201ENST00000559214 IFFO2Q5TF58 517 aa9.44□□□□□ -0.9
AC087477.3-201ENST00000559214 THSD4Q6ZMP0 1018 aa9.44□□□□□ -0.9
AC087477.3-201ENST00000559214 CADPS2Q86UW7 1296 aa9.43□□□□□ -0.9
AC087477.3-201ENST00000559214 PCDHGA10Q9Y5H3 936 aa9.42□□□□□ -0.9
AC087477.3-201ENST00000559214 PTPN5P54829 565 aa9.41□□□□□ -0.9
AC087477.3-201ENST00000559214 MAP3K9P80192 1104 aa9.4□□□□□ -0.9
AC087477.3-201ENST00000559214 URB2Q14146 1524 aaKnown RBP9.39□□□□□ -0.91
AC087477.3-201ENST00000559214 WDR62O43379 1518 aa9.38□□□□□ -0.91
AC087477.3-201ENST00000559214 PPP1R3GB7ZBB8 358 aa9.38□□□□□ -0.91
AC087477.3-201ENST00000559214 CAMK2BQ13554 666 aa9.38□□□□□ -0.91
AC087477.3-201ENST00000559214 MRPL50Q8N5N7 158 aaKnown RBP9.38□□□□□ -0.91
AC087477.3-201ENST00000559214 WNT2BQ93097 391 aa9.38□□□□□ -0.91
AC087477.3-201ENST00000559214 COL9A1P20849 921 aa9.37□□□□□ -0.91
AC087477.3-201ENST00000559214 PHF14O94880 888 aa9.35□□□□□ -0.91
AC087477.3-201ENST00000559214 PROX2Q3B8N5 592 aa9.35□□□□□ -0.91
AC087477.3-201ENST00000559214 NBPF3Q9H094 633 aa9.35□□□□□ -0.91
AC087477.3-201ENST00000559214 RABGEF1Q9UJ41 708 aa9.35□□□□□ -0.91
AC087477.3-201ENST00000559214 RGS20O76081 388 aa9.34□□□□□ -0.91
AC087477.3-201ENST00000559214 TYW1BQ6NUM6 668 aa9.33□□□□□ -0.92
AC087477.3-201ENST00000559214 FBXW7Q969H0 707 aa9.33□□□□□ -0.92
AC087477.3-201ENST00000559214 A0A0G2JS52 829 aa9.32□□□□□ -0.92
AC087477.3-201ENST00000559214 GOLGA8CPA6NN73 597 aa9.32□□□□□ -0.92
AC087477.3-201ENST00000559214 TOPBP1Q92547 1522 aa9.3□□□□□ -0.92
AC087477.3-201ENST00000559214 ONECUT3O60422 494 aaPredicted RBP9.29□□□□□ -0.92
AC087477.3-201ENST00000559214 LAPTM4BQ86VI4 370 aa9.29□□□□□ -0.92
AC087477.3-201ENST00000559214 ZNF608Q9ULD9 1512 aaPredicted RBP9.28□□□□□ -0.92
AC087477.3-201ENST00000559214 ITGBL1O95965 494 aaPredicted RBP9.28□□□□□ -0.92
AC087477.3-201ENST00000559214 C6orf132Q5T0Z8 1188 aa9.28□□□□□ -0.92
AC087477.3-201ENST00000559214 DPYSL4O14531 572 aa9.27□□□□□ -0.93
AC087477.3-201ENST00000559214 EPAS1Q99814 870 aa9.27□□□□□ -0.93
AC087477.3-201ENST00000559214 SOWAHBA6NEL2 793 aa9.26□□□□□ -0.93
AC087477.3-201ENST00000559214 KIAA1468Q9P260 1216 aa9.26□□□□□ -0.93
AC087477.3-201ENST00000559214 AQRO60306 1485 aaKnown RBP eCLIP9.26□□□□□ -0.93
AC087477.3-201ENST00000559214 IFT140Q96RY7 1462 aa9.26□□□□□ -0.93
AC087477.3-201ENST00000559214 RAD54L2Q9Y4B4 1467 aa9.26□□□□□ -0.93
AC087477.3-201ENST00000559214 ABCC8Q09428 1581 aa9.25□□□□□ -0.93
AC087477.3-201ENST00000559214 SOGA1O94964 1423 aa9.25□□□□□ -0.93
AC087477.3-201ENST00000559214 ANKK1Q8NFD2 765 aa9.25□□□□□ -0.93
AC087477.3-201ENST00000559214 TDRD9Q8NDG6 1382 aaKnown RBP9.24□□□□□ -0.93
AC087477.3-201ENST00000559214 BCAMP50895 628 aa9.24□□□□□ -0.93
AC087477.3-201ENST00000559214 ZFRQ96KR1 1074 aaKnown RBP9.24□□□□□ -0.93
AC087477.3-201ENST00000559214 DNMBPQ6XZF7 1577 aa9.23□□□□□ -0.93
AC087477.3-201ENST00000559214 POLA1P09884 1462 aaPredicted RBP9.22□□□□□ -0.93
AC087477.3-201ENST00000559214 TRIM6-TRIM34B2RNG4 842 aa9.22□□□□□ -0.93
AC087477.3-201ENST00000559214 PRDM2Q13029 1718 aa9.2□□□□□ -0.94
AC087477.3-201ENST00000559214 NYAP1Q6ZVC0 841 aa9.2□□□□□ -0.94
AC087477.3-201ENST00000559214 WBP1LQ9NX94 342 aa9.2□□□□□ -0.94
AC087477.3-201ENST00000559214 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
AC087477.3-201ENST00000559214 FGD5Q6ZNL6 1462 aa9.2□□□□□ -0.94
AC087477.3-201ENST00000559214 CUX1P39880 1505 aa9.2□□□□□ -0.94
AC087477.3-201ENST00000559214 PDIA6Q15084 440 aa9.19□□□□□ -0.94
AC087477.3-201ENST00000559214 DDX12PQ92771 950 aa9.19□□□□□ -0.94
AC087477.3-201ENST00000559214 EN1Q05925 392 aaPredicted RBP9.18□□□□□ -0.94
AC087477.3-201ENST00000559214 FAM98CQ17RN3 349 aaKnown RBP9.18□□□□□ -0.94
AC087477.3-201ENST00000559214 BBXQ8WY36 941 aaPredicted RBP9.18□□□□□ -0.94
AC087477.3-201ENST00000559214 RBM33Q96EV2 1170 aaKnown RBP9.17□□□□□ -0.94
AC087477.3-201ENST00000559214 IRX2Q9BZI1 471 aaPredicted RBP9.17□□□□□ -0.94
AC087477.3-201ENST00000559214 TSKSQ9UJT2 592 aa9.17□□□□□ -0.94
AC087477.3-201ENST00000559214 TARBP1Q13395 1621 aaKnown RBP9.16□□□□□ -0.94
AC087477.3-201ENST00000559214 CHMP7Q8WUX9 453 aaPredicted RBP9.16□□□□□ -0.94
AC087477.3-201ENST00000559214 TSR1Q2NL82 804 aaKnown RBP9.15□□□□□ -0.94
AC087477.3-201ENST00000559214 PRIM1P49642 420 aaKnown RBP9.14□□□□□ -0.95
AC087477.3-201ENST00000559214 ARIH1Q9Y4X5 557 aaPredicted RBP9.14□□□□□ -0.95
AC087477.3-201ENST00000559214 WRNQ14191 1432 aaPredicted RBP eCLIP9.14□□□□□ -0.95
AC087477.3-201ENST00000559214 EIF4G3O43432 1585 aaKnown RBP9.13□□□□□ -0.95
AC087477.3-201ENST00000559214 SPDYE16A6NNV3 312 aaPredicted RBP9.13□□□□□ -0.95
AC087477.3-201ENST00000559214 TSR3Q9UJK0 312 aaKnown RBP9.13□□□□□ -0.95
AC087477.3-201ENST00000559214 NBR1Q14596 966 aa9.12□□□□□ -0.95
AC087477.3-201ENST00000559214 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.12□□□□□ -0.95
AC087477.3-201ENST00000559214 FAM198AQ9UFP1 575 aa9.12□□□□□ -0.95
AC087477.3-201ENST00000559214 KCNC4Q03721 635 aa9.11□□□□□ -0.95
AC087477.3-201ENST00000559214 SNAPC4Q5SXM2 1469 aa9.1□□□□□ -0.95
AC087477.3-201ENST00000559214 C3orf80F5H4A9 247 aa9.1□□□□□ -0.95
AC087477.3-201ENST00000559214 MAP3K7O43318 606 aa9.1□□□□□ -0.95
AC087477.3-201ENST00000559214 CYB5RLQ6IPT4 315 aa9.1□□□□□ -0.95
AC087477.3-201ENST00000559214 LRCH3Q96II8 777 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms