RNA–Protein interactions for RNA: ENST00000557355.1

LINC01146-208, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 4 BASIC

Gene LINC01146, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-208ENST00000557355 PROX2Q3B8N5 592 aa12.57□□□□□ -0.4
LINC01146-208ENST00000557355 ANKK1Q8NFD2 765 aa12.57□□□□□ -0.4
LINC01146-208ENST00000557355 CADPS2Q86UW7 1296 aa12.56□□□□□ -0.4
LINC01146-208ENST00000557355 LAPTM4BQ86VI4 370 aa12.53□□□□□ -0.4
LINC01146-208ENST00000557355 EPAS1Q99814 870 aa12.5□□□□□ -0.41
LINC01146-208ENST00000557355 IRX2Q9BZI1 471 aaPredicted RBP12.5□□□□□ -0.41
LINC01146-208ENST00000557355 KIAA1468Q9P260 1216 aa12.5□□□□□ -0.41
LINC01146-208ENST00000557355 BCAMP50895 628 aa12.49□□□□□ -0.41
LINC01146-208ENST00000557355 SOWAHBA6NEL2 793 aa12.48□□□□□ -0.41
LINC01146-208ENST00000557355 ONECUT3O60422 494 aaPredicted RBP12.48□□□□□ -0.41
LINC01146-208ENST00000557355 CAMK2BQ13554 666 aa12.48□□□□□ -0.41
LINC01146-208ENST00000557355 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
LINC01146-208ENST00000557355 C6orf132Q5T0Z8 1188 aa12.47□□□□□ -0.41
LINC01146-208ENST00000557355 DPYSL4O14531 572 aa12.46□□□□□ -0.41
LINC01146-208ENST00000557355 ZFRQ96KR1 1074 aaKnown RBP12.46□□□□□ -0.41
LINC01146-208ENST00000557355 NYAP1Q6ZVC0 841 aa12.45□□□□□ -0.42
LINC01146-208ENST00000557355 SEPT9Q9UHD8 586 aaPredicted RBP12.42□□□□□ -0.42
LINC01146-208ENST00000557355 TRIM6-TRIM34B2RNG4 842 aa12.41□□□□□ -0.42
LINC01146-208ENST00000557355 RBM33Q96EV2 1170 aaKnown RBP12.41□□□□□ -0.42
LINC01146-208ENST00000557355 WBP1LQ9NX94 342 aa12.4□□□□□ -0.42
LINC01146-208ENST00000557355 FAM98CQ17RN3 349 aaKnown RBP12.39□□□□□ -0.43
LINC01146-208ENST00000557355 DDX12PQ92771 950 aa12.39□□□□□ -0.43
LINC01146-208ENST00000557355 KCNC4Q03721 635 aa12.36□□□□□ -0.43
LINC01146-208ENST00000557355 LRCH3Q96II8 777 aa12.35□□□□□ -0.43
LINC01146-208ENST00000557355 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.35□□□□□ -0.43
LINC01146-208ENST00000557355 TSR3Q9UJK0 312 aaKnown RBP12.35□□□□□ -0.43
LINC01146-208ENST00000557355 EN1Q05925 392 aaPredicted RBP12.32□□□□□ -0.44
LINC01146-208ENST00000557355 NBR1Q14596 966 aa12.32□□□□□ -0.44
LINC01146-208ENST00000557355 PACS2Q86VP3 889 aa12.32□□□□□ -0.44
LINC01146-208ENST00000557355 HPS5Q9UPZ3 1129 aa12.32□□□□□ -0.44
LINC01146-208ENST00000557355 MAP3K7O43318 606 aa12.31□□□□□ -0.44
LINC01146-208ENST00000557355 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
LINC01146-208ENST00000557355 PDIA6Q15084 440 aa12.29□□□□□ -0.44
LINC01146-208ENST00000557355 TSR1Q2NL82 804 aaKnown RBP12.29□□□□□ -0.44
LINC01146-208ENST00000557355 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
LINC01146-208ENST00000557355 SPDYE16A6NNV3 312 aaPredicted RBP12.27□□□□□ -0.45
LINC01146-208ENST00000557355 PPP4CP60510 307 aa12.24□□□□□ -0.45
LINC01146-208ENST00000557355 Q6ZNB5 142 aa12.23□□□□□ -0.45
LINC01146-208ENST00000557355 CDCA7LQ96GN5 454 aa12.22□□□□□ -0.45
LINC01146-208ENST00000557355 PRSS12P56730 875 aa12.21□□□□□ -0.45
LINC01146-208ENST00000557355 CERKQ8TCT0 537 aa12.21□□□□□ -0.45
LINC01146-208ENST00000557355 SAMD7Q7Z3H4 446 aa12.19□□□□□ -0.46
LINC01146-208ENST00000557355 SMAPO00193 183 aa12.18□□□□□ -0.46
LINC01146-208ENST00000557355 E2F4Q16254 413 aa12.18□□□□□ -0.46
LINC01146-208ENST00000557355 SPRYD3Q8NCJ5 442 aa12.18□□□□□ -0.46
LINC01146-208ENST00000557355 FAM198AQ9UFP1 575 aa12.17□□□□□ -0.46
LINC01146-208ENST00000557355 GRXCR2A6NFK2 248 aa12.16□□□□□ -0.46
LINC01146-208ENST00000557355 LAPTM4AQ15012 233 aa12.16□□□□□ -0.46
LINC01146-208ENST00000557355 TJAP1Q5JTD0 557 aa12.16□□□□□ -0.46
LINC01146-208ENST00000557355 NBPF26B4DH59 902 aa12.15□□□□□ -0.46
LINC01146-208ENST00000557355 PRIM1P49642 420 aaKnown RBP12.15□□□□□ -0.46
LINC01146-208ENST00000557355 TATDN2Q93075 761 aa12.15□□□□□ -0.46
LINC01146-208ENST00000557355 ARIH1Q9Y4X5 557 aaPredicted RBP12.15□□□□□ -0.46
LINC01146-208ENST00000557355 PNMA3Q9UL41 463 aa12.14□□□□□ -0.47
LINC01146-208ENST00000557355 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.13□□□□□ -0.47
LINC01146-208ENST00000557355 WDR70Q9NW82 654 aa12.12□□□□□ -0.47
LINC01146-208ENST00000557355 C3orf80F5H4A9 247 aa12.11□□□□□ -0.47
LINC01146-208ENST00000557355 HDGFP51858 240 aaKnown RBP12.11□□□□□ -0.47
LINC01146-208ENST00000557355 MTRQ99707 1265 aa12.11□□□□□ -0.47
LINC01146-208ENST00000557355 IL21Q9HBE4 155 aa12.11□□□□□ -0.47
LINC01146-208ENST00000557355 GFRA3O60609 400 aa12.09□□□□□ -0.47
LINC01146-208ENST00000557355 OSBPP22059 807 aa12.08□□□□□ -0.48
LINC01146-208ENST00000557355 NUDT18Q6ZVK8 323 aa12.08□□□□□ -0.48
LINC01146-208ENST00000557355 PRKD2Q9BZL6 878 aa12.08□□□□□ -0.48
LINC01146-208ENST00000557355 RBM27Q9P2N5 1060 aaKnown RBP12.08□□□□□ -0.48
LINC01146-208ENST00000557355 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
LINC01146-208ENST00000557355 RNF40O75150 1001 aa12.06□□□□□ -0.48
LINC01146-208ENST00000557355 PPP1R18Q6NYC8 613 aa12.06□□□□□ -0.48
LINC01146-208ENST00000557355 APLP1P51693 650 aa12.03□□□□□ -0.48
LINC01146-208ENST00000557355 TRAF7Q6Q0C0 670 aa12.03□□□□□ -0.48
LINC01146-208ENST00000557355 ZNF516Q92618 1163 aa12.03□□□□□ -0.48
LINC01146-208ENST00000557355 NECTIN2Q92692 538 aa12.03□□□□□ -0.48
LINC01146-208ENST00000557355 V9GY48 417 aaPredicted RBP12.03□□□□□ -0.48
LINC01146-208ENST00000557355 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.02□□□□□ -0.49
LINC01146-208ENST00000557355 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
LINC01146-208ENST00000557355 NRG2O14511 850 aaPredicted RBP12□□□□□ -0.49
LINC01146-208ENST00000557355 LCE2BO14633 110 aa12□□□□□ -0.49
LINC01146-208ENST00000557355 PAXIP1Q6ZW49 1069 aaPredicted RBP12□□□□□ -0.49
LINC01146-208ENST00000557355 TTC13Q8NBP0 860 aa11.99□□□□□ -0.49
LINC01146-208ENST00000557355 SWT1Q5T5J6 900 aaKnown RBP11.98□□□□□ -0.49
LINC01146-208ENST00000557355 PADI6Q6TGC4 694 aa11.98□□□□□ -0.49
LINC01146-208ENST00000557355 SLF2Q8IX21 1173 aa11.98□□□□□ -0.49
LINC01146-208ENST00000557355 NPDC1Q9NQX5 325 aaPredicted RBP11.97□□□□□ -0.49
LINC01146-208ENST00000557355 NKX2-3Q8TAU0 364 aa11.96□□□□□ -0.49
LINC01146-208ENST00000557355 GGCXP38435 758 aa11.95□□□□□ -0.5
LINC01146-208ENST00000557355 SLC4A3P48751 1232 aa11.95□□□□□ -0.5
LINC01146-208ENST00000557355 COPS2P61201 443 aa11.94□□□□□ -0.5
LINC01146-208ENST00000557355 EYA1Q99502 592 aa11.91□□□□□ -0.5
LINC01146-208ENST00000557355 TMUB1Q9BVT8 246 aa11.9□□□□□ -0.5
LINC01146-208ENST00000557355 PDZRN3Q9UPQ7 1066 aa11.9□□□□□ -0.5
LINC01146-208ENST00000557355 PRR14Q9BWN1 585 aa11.89□□□□□ -0.51
LINC01146-208ENST00000557355 ZPR1O75312 459 aa11.88□□□□□ -0.51
LINC01146-208ENST00000557355 AMER1Q5JTC6 1135 aaPredicted RBP11.88□□□□□ -0.51
LINC01146-208ENST00000557355 PCDHB3Q9Y5E6 796 aa11.85□□□□□ -0.51
LINC01146-208ENST00000557355 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
LINC01146-208ENST00000557355 DNAJB2P25686 324 aa11.81□□□□□ -0.52
LINC01146-208ENST00000557355 MLLT3P42568 568 aaPredicted RBP11.81□□□□□ -0.52
LINC01146-208ENST00000557355 BLOC1S3Q6QNY0 202 aa11.81□□□□□ -0.52
LINC01146-208ENST00000557355 ZNF787Q6DD87 383 aa11.8□□□□□ -0.52
LINC01146-208ENST00000557355 PTGDRQ13258 359 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms