RNA–Protein interactions for RNA: ENST00000556925.5

NEMF-213, Transcript of nuclear export mediator factor, humanhuman

TSL 5

Gene NEMF, Length 3,699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-213ENST00000556925 PLEKHD1A6NEE1 506 aa11.54□□□□□ -0.56
NEMF-213ENST00000556925 SIRT1Q96EB6 747 aa11.54□□□□□ -0.56
NEMF-213ENST00000556925 FAM9BQ8IZU0 186 aa11.54□□□□□ -0.56
NEMF-213ENST00000556925 CAPN2P17655 700 aa11.53□□□□□ -0.56
NEMF-213ENST00000556925 OFD1O75665 1012 aa11.53□□□□□ -0.56
NEMF-213ENST00000556925 FSD2A1L4K1 749 aa11.52□□□□□ -0.56
NEMF-213ENST00000556925 MAP2K1Q02750 393 aaPredicted RBP11.52□□□□□ -0.56
NEMF-213ENST00000556925 CCER2I3L3R5 266 aa11.52□□□□□ -0.57
NEMF-213ENST00000556925 GOLIM4O00461 696 aa11.51□□□□□ -0.57
NEMF-213ENST00000556925 TRIM6-TRIM34B2RNG4 842 aa11.51□□□□□ -0.57
NEMF-213ENST00000556925 SATB1Q01826 763 aa11.51□□□□□ -0.57
NEMF-213ENST00000556925 TRIM34Q9BYJ4 488 aa11.51□□□□□ -0.57
NEMF-213ENST00000556925 FAM50AQ14320 339 aaKnown RBP11.5□□□□□ -0.57
NEMF-213ENST00000556925 NACADO15069 1562 aa11.5□□□□□ -0.57
NEMF-213ENST00000556925 CCDC27Q2M243 656 aa11.49□□□□□ -0.57
NEMF-213ENST00000556925 NBPF9Q3BBW0 867 aa11.49□□□□□ -0.57
NEMF-213ENST00000556925 TMTC2Q8N394 836 aa11.49□□□□□ -0.57
NEMF-213ENST00000556925 TULP2O00295 520 aa11.49□□□□□ -0.57
NEMF-213ENST00000556925 SLC4A3P48751 1232 aa11.48□□□□□ -0.57
NEMF-213ENST00000556925 CEP83Q9Y592 693 aa11.48□□□□□ -0.57
NEMF-213ENST00000556925 OTUD6BQ8N6M0 293 aa11.48□□□□□ -0.57
NEMF-213ENST00000556925 PDE4AP27815 886 aa11.48□□□□□ -0.57
NEMF-213ENST00000556925 SGSM3Q96HU1 749 aa11.48□□□□□ -0.57
NEMF-213ENST00000556925 CBX1P83916 185 aa11.47□□□□□ -0.57
NEMF-213ENST00000556925 BACH2Q9BYV9 841 aa11.47□□□□□ -0.57
NEMF-213ENST00000556925 DNAJC14Q6Y2X3 702 aaPredicted RBP11.47□□□□□ -0.57
NEMF-213ENST00000556925 ZNF428Q96B54 188 aa11.47□□□□□ -0.57
NEMF-213ENST00000556925 RAI14Q9P0K7 980 aa11.47□□□□□ -0.57
NEMF-213ENST00000556925 DYNC1I1O14576 645 aa11.46□□□□□ -0.57
NEMF-213ENST00000556925 BRPF1P55201 1214 aaPredicted RBP11.46□□□□□ -0.58
NEMF-213ENST00000556925 NBPF10Q6P3W6 841 aaKnown RBP11.46□□□□□ -0.58
NEMF-213ENST00000556925 ZBTB12Q9Y330 459 aaPredicted RBP11.45□□□□□ -0.58
NEMF-213ENST00000556925 EFCC1Q9HA90 598 aa11.45□□□□□ -0.58
NEMF-213ENST00000556925 NECTIN2Q92692 538 aa11.45□□□□□ -0.58
NEMF-213ENST00000556925 CCDC96Q2M329 555 aa11.44□□□□□ -0.58
NEMF-213ENST00000556925 SIN3AQ96ST3 1273 aa11.44□□□□□ -0.58
NEMF-213ENST00000556925 UQCRHLA0A096LP55 91 aa11.44□□□□□ -0.58
NEMF-213ENST00000556925 UQCRHP07919 91 aa11.44□□□□□ -0.58
NEMF-213ENST00000556925 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.44□□□□□ -0.58
NEMF-213ENST00000556925 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
NEMF-213ENST00000556925 ZNF513Q8N8E2 541 aaPredicted RBP11.43□□□□□ -0.58
NEMF-213ENST00000556925 CCDC172P0C7W6 258 aa11.43□□□□□ -0.58
NEMF-213ENST00000556925 ZBED9Q6R2W3 1325 aa11.43□□□□□ -0.58
NEMF-213ENST00000556925 ARID4AP29374 1257 aaPredicted RBP11.42□□□□□ -0.58
NEMF-213ENST00000556925 ATP2B3Q16720 1220 aa11.41□□□□□ -0.58
NEMF-213ENST00000556925 MYCBPQ99417 103 aaPredicted RBP11.41□□□□□ -0.58
NEMF-213ENST00000556925 R3HCC1Q9Y3T6 440 aaKnown RBP11.41□□□□□ -0.58
NEMF-213ENST00000556925 TERF2IPQ9NYB0 399 aa11.41□□□□□ -0.58
NEMF-213ENST00000556925 MYH16Q9H6N6 1097 aa11.4□□□□□ -0.58
NEMF-213ENST00000556925 SMC4Q9NTJ3 1288 aa11.4□□□□□ -0.58
NEMF-213ENST00000556925 ZCCHC6Q5VYS8 1495 aaKnown RBP11.39□□□□□ -0.59
NEMF-213ENST00000556925 NCAPGQ9BPX3 1015 aa11.39□□□□□ -0.59
NEMF-213ENST00000556925 KDM4AO75164 1064 aa11.39□□□□□ -0.59
NEMF-213ENST00000556925 HNRNPUQ00839 825 aaKnown RBP eCLIP11.38□□□□□ -0.59
NEMF-213ENST00000556925 NBPF6Q5VWK0 638 aa11.38□□□□□ -0.59
NEMF-213ENST00000556925 NBPF5PQ86XG9 351 aaPredicted RBP11.38□□□□□ -0.59
NEMF-213ENST00000556925 NBPF4Q96M43 638 aa11.38□□□□□ -0.59
NEMF-213ENST00000556925 TIGD1Q96MW7 591 aa11.38□□□□□ -0.59
NEMF-213ENST00000556925 FAM177A1Q8N128 213 aaPredicted RBP11.37□□□□□ -0.59
NEMF-213ENST00000556925 CT47B1P0C2W7 299 aaPredicted RBP11.37□□□□□ -0.59
NEMF-213ENST00000556925 DDX10Q13206 875 aaKnown RBP11.37□□□□□ -0.59
NEMF-213ENST00000556925 MRE11P49959 708 aa11.37□□□□□ -0.59
NEMF-213ENST00000556925 CALR3Q96L12 384 aaKnown RBP11.37□□□□□ -0.59
NEMF-213ENST00000556925 ZKSCAN8Q15776 578 aaPredicted RBP11.36□□□□□ -0.59
NEMF-213ENST00000556925 RINLQ6ZS11 566 aa11.36□□□□□ -0.59
NEMF-213ENST00000556925 ZNF771Q7L3S4 317 aaPredicted RBP11.36□□□□□ -0.59
NEMF-213ENST00000556925 TSPYL1Q9H0U9 437 aa11.36□□□□□ -0.59
NEMF-213ENST00000556925 NOP2P46087 812 aaKnown RBP11.36□□□□□ -0.59
NEMF-213ENST00000556925 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
NEMF-213ENST00000556925 KIF16BQ96L93 1317 aa11.35□□□□□ -0.59
NEMF-213ENST00000556925 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
NEMF-213ENST00000556925 ARMCX6Q7L4S7 300 aa11.35□□□□□ -0.59
NEMF-213ENST00000556925 DNAJC21Q5F1R6 531 aaKnown RBP11.34□□□□□ -0.59
NEMF-213ENST00000556925 TSHZ1Q6ZSZ6 1077 aa11.34□□□□□ -0.59
NEMF-213ENST00000556925 FEZ2Q9UHY8 353 aaPredicted RBP11.34□□□□□ -0.59
NEMF-213ENST00000556925 BSDC1Q9NW68 430 aaPredicted RBP11.33□□□□□ -0.59
NEMF-213ENST00000556925 CCDC189A1A4V9 331 aa11.33□□□□□ -0.6
NEMF-213ENST00000556925 MS4A1P11836 297 aa11.33□□□□□ -0.6
NEMF-213ENST00000556925 FOXD4L6Q3SYB3 417 aaPredicted RBP11.33□□□□□ -0.6
NEMF-213ENST00000556925 FOXD4L3Q6VB84 417 aaPredicted RBP11.33□□□□□ -0.6
NEMF-213ENST00000556925 GTF2A1P52655 376 aaPredicted RBP11.32□□□□□ -0.6
NEMF-213ENST00000556925 KIF3AQ9Y496 699 aa11.32□□□□□ -0.6
NEMF-213ENST00000556925 SSR1P43307 286 aaKnown RBP11.32□□□□□ -0.6
NEMF-213ENST00000556925 DONSONQ9NYP3 566 aa11.32□□□□□ -0.6
NEMF-213ENST00000556925 FBLN2P98095 1184 aa11.32□□□□□ -0.6
NEMF-213ENST00000556925 ZC3H12AQ5D1E8 599 aaKnown RBP11.32□□□□□ -0.6
NEMF-213ENST00000556925 ZSCAN30Q86W11 494 aa11.32□□□□□ -0.6
NEMF-213ENST00000556925 MTA1Q13330 715 aa11.31□□□□□ -0.6
NEMF-213ENST00000556925 ANKRD23Q86SG2 305 aa11.31□□□□□ -0.6
NEMF-213ENST00000556925 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
NEMF-213ENST00000556925 CCDC66A2RUB6 948 aa11.31□□□□□ -0.6
NEMF-213ENST00000556925 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
NEMF-213ENST00000556925 GRPEL1Q9HAV7 217 aa11.31□□□□□ -0.6
NEMF-213ENST00000556925 ITFG2Q969R8 447 aa11.3□□□□□ -0.6
NEMF-213ENST00000556925 IPO8O15397 1037 aaKnown RBP11.29□□□□□ -0.6
NEMF-213ENST00000556925 PNISRQ8TF01 805 aaKnown RBP11.29□□□□□ -0.6
NEMF-213ENST00000556925 SPINK5Q9NQ38 1064 aaPredicted RBP11.29□□□□□ -0.6
NEMF-213ENST00000556925 PHLDB1Q86UU1 1377 aa11.29□□□□□ -0.6
NEMF-213ENST00000556925 ANP32CO43423 234 aa11.29□□□□□ -0.6
NEMF-213ENST00000556925 ZNF853P0CG23 659 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms