RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 PTPREP23469 700 aa16.46■□□□□ 0.23
PCNX1-205ENST00000553508 PBX2P40425 430 aa16.46■□□□□ 0.23
PCNX1-205ENST00000553508 KCNH8Q96L42 1107 aa16.46■□□□□ 0.23
PCNX1-205ENST00000553508 EN1Q05925 392 aaPredicted RBP16.45■□□□□ 0.22
PCNX1-205ENST00000553508 TESPA1A2RU30 521 aaPredicted RBP16.44■□□□□ 0.22
PCNX1-205ENST00000553508 ANKRD13DQ6ZTN6 518 aa16.44■□□□□ 0.22
PCNX1-205ENST00000553508 C6orf132Q5T0Z8 1188 aa16.43■□□□□ 0.22
PCNX1-205ENST00000553508 DMRTA1Q5VZB9 504 aa16.43■□□□□ 0.22
PCNX1-205ENST00000553508 TSR1Q2NL82 804 aaKnown RBP16.42■□□□□ 0.22
PCNX1-205ENST00000553508 LSM11P83369 360 aaKnown RBP eCLIP16.4■□□□□ 0.22
PCNX1-205ENST00000553508 COL9A1P20849 921 aa16.38■□□□□ 0.21
PCNX1-205ENST00000553508 SMYD5Q6GMV2 418 aa16.38■□□□□ 0.21
PCNX1-205ENST00000553508 CDHR5Q9HBB8 845 aa16.35■□□□□ 0.21
PCNX1-205ENST00000553508 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.2
PCNX1-205ENST00000553508 NUTM2FA1L443 756 aa16.32■□□□□ 0.2
PCNX1-205ENST00000553508 PPP1R3GB7ZBB8 358 aa16.32■□□□□ 0.2
PCNX1-205ENST00000553508 ZBED2Q9BTP6 218 aa16.29■□□□□ 0.2
PCNX1-205ENST00000553508 PROX2Q3B8N5 592 aa16.28■□□□□ 0.2
PCNX1-205ENST00000553508 ADGRD1Q6QNK2 874 aa16.28■□□□□ 0.2
PCNX1-205ENST00000553508 TULP1O00294 542 aaPredicted RBP16.27■□□□□ 0.2
PCNX1-205ENST00000553508 VPS9D1Q9Y2B5 631 aa16.25■□□□□ 0.19
PCNX1-205ENST00000553508 TK2O00142 265 aa16.23■□□□□ 0.19
PCNX1-205ENST00000553508 SPNS2Q8IVW8 549 aa16.23■□□□□ 0.19
PCNX1-205ENST00000553508 NPDC1Q9NQX5 325 aaPredicted RBP16.22■□□□□ 0.19
PCNX1-205ENST00000553508 CERKQ8TCT0 537 aa16.2■□□□□ 0.18
PCNX1-205ENST00000553508 SLC4A5Q9BY07 1137 aa16.2■□□□□ 0.18
PCNX1-205ENST00000553508 CDCA7LQ96GN5 454 aa16.19■□□□□ 0.18
PCNX1-205ENST00000553508 PRSS12P56730 875 aa16.18■□□□□ 0.18
PCNX1-205ENST00000553508 STAC3Q96MF2 364 aa16.18■□□□□ 0.18
PCNX1-205ENST00000553508 PTGDRQ13258 359 aa16.17■□□□□ 0.18
PCNX1-205ENST00000553508 BCANQ96GW7 911 aa16.17■□□□□ 0.18
PCNX1-205ENST00000553508 TRIM6-TRIM34B2RNG4 842 aa16.16■□□□□ 0.18
PCNX1-205ENST00000553508 HRO43593 1189 aa16.16■□□□□ 0.18
PCNX1-205ENST00000553508 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.16■□□□□ 0.18
PCNX1-205ENST00000553508 KIAA1468Q9P260 1216 aa16.16■□□□□ 0.18
PCNX1-205ENST00000553508 TSKSQ9UJT2 592 aa16.16■□□□□ 0.18
PCNX1-205ENST00000553508 GPIHBP1Q8IV16 184 aa16.15■□□□□ 0.18
PCNX1-205ENST00000553508 FCHSD2O94868 740 aa16.14■□□□□ 0.17
PCNX1-205ENST00000553508 LMOD2Q6P5Q4 547 aa16.14■□□□□ 0.17
PCNX1-205ENST00000553508 PLSCR2Q9NRY7 297 aa16.14■□□□□ 0.17
PCNX1-205ENST00000553508 PADI6Q6TGC4 694 aa16.13■□□□□ 0.17
PCNX1-205ENST00000553508 FAM198AQ9UFP1 575 aa16.13■□□□□ 0.17
PCNX1-205ENST00000553508 RABGEF1Q9UJ41 708 aa16.13■□□□□ 0.17
PCNX1-205ENST00000553508 PACS2Q86VP3 889 aa16.1■□□□□ 0.17
PCNX1-205ENST00000553508 MYT1LQ9UL68 1186 aa16.1■□□□□ 0.17
PCNX1-205ENST00000553508 BHMG1C9JSJ3 638 aaPredicted RBP16.09■□□□□ 0.17
PCNX1-205ENST00000553508 ONECUT3O60422 494 aaPredicted RBP16.08■□□□□ 0.16
PCNX1-205ENST00000553508 MRPL50Q8N5N7 158 aaKnown RBP16.08■□□□□ 0.16
PCNX1-205ENST00000553508 NBPF3Q9H094 633 aa16.08■□□□□ 0.16
PCNX1-205ENST00000553508 SEPT9Q9UHD8 586 aaPredicted RBP16.08■□□□□ 0.16
PCNX1-205ENST00000553508 SMAPO00193 183 aa16.07■□□□□ 0.16
PCNX1-205ENST00000553508 MMRN1Q13201 1228 aa16.06■□□□□ 0.16
PCNX1-205ENST00000553508 GPR37O15354 613 aa16.05■□□□□ 0.16
PCNX1-205ENST00000553508 HIC1Q14526 733 aa16.05■□□□□ 0.16
PCNX1-205ENST00000553508 RBM27Q9P2N5 1060 aaKnown RBP16.05■□□□□ 0.16
PCNX1-205ENST00000553508 PNMA3Q9UL41 463 aa16.05■□□□□ 0.16
PCNX1-205ENST00000553508 GOLGA8CPA6NN73 597 aa16.04■□□□□ 0.16
PCNX1-205ENST00000553508 C3orf80F5H4A9 247 aa16.04■□□□□ 0.16
PCNX1-205ENST00000553508 FECHP22830 423 aa16.04■□□□□ 0.16
PCNX1-205ENST00000553508 GNPATO15228 680 aa16.02■□□□□ 0.16
PCNX1-205ENST00000553508 FAM161AQ3B820 660 aa16.02■□□□□ 0.16
PCNX1-205ENST00000553508 NUDT18Q6ZVK8 323 aa16.02■□□□□ 0.16
PCNX1-205ENST00000553508 TATDN2Q93075 761 aa16.02■□□□□ 0.16
PCNX1-205ENST00000553508 NBPF26B4DH59 902 aa16.01■□□□□ 0.15
PCNX1-205ENST00000553508 TTC13Q8NBP0 860 aa16.01■□□□□ 0.15
PCNX1-205ENST00000553508 RNF166Q96A37 237 aaPredicted RBP16■□□□□ 0.15
PCNX1-205ENST00000553508 KCTD12Q96CX2 325 aaKnown RBP15.98■□□□□ 0.15
PCNX1-205ENST00000553508 FAM98CQ17RN3 349 aaKnown RBP15.95■□□□□ 0.14
PCNX1-205ENST00000553508 LAPTM4BQ86VI4 370 aa15.95■□□□□ 0.14
PCNX1-205ENST00000553508 WNT2BQ93097 391 aa15.94■□□□□ 0.14
PCNX1-205ENST00000553508 ZFRQ96KR1 1074 aaKnown RBP15.94■□□□□ 0.14
PCNX1-205ENST00000553508 ZC3H15Q8WU90 426 aaKnown RBP15.93■□□□□ 0.14
PCNX1-205ENST00000553508 ADGRG1Q9Y653 693 aa15.93■□□□□ 0.14
PCNX1-205ENST00000553508 RBM46Q8TBY0 533 aaKnown RBP15.89■□□□□ 0.13
PCNX1-205ENST00000553508 EYA1Q99502 592 aa15.89■□□□□ 0.13
PCNX1-205ENST00000553508 ANKK1Q8NFD2 765 aa15.88■□□□□ 0.13
PCNX1-205ENST00000553508 PTPN5P54829 565 aa15.86■□□□□ 0.13
PCNX1-205ENST00000553508 KRI1Q8N9T8 703 aaKnown RBP15.86■□□□□ 0.13
PCNX1-205ENST00000553508 BCAMP50895 628 aa15.85■□□□□ 0.13
PCNX1-205ENST00000553508 SAMD7Q7Z3H4 446 aa15.85■□□□□ 0.13
PCNX1-205ENST00000553508 OATP04181 439 aa15.84■□□□□ 0.13
PCNX1-205ENST00000553508 ZMYND10O75800 440 aa15.83■□□□□ 0.12
PCNX1-205ENST00000553508 HDGFP51858 240 aaKnown RBP15.83■□□□□ 0.12
PCNX1-205ENST00000553508 MAP2K5Q13163 448 aa15.83■□□□□ 0.12
PCNX1-205ENST00000553508 THSD4Q6ZMP0 1018 aa15.83■□□□□ 0.12
PCNX1-205ENST00000553508 PXYLP1Q8TE99 480 aa15.82■□□□□ 0.12
PCNX1-205ENST00000553508 LRCH3Q96II8 777 aa15.82■□□□□ 0.12
PCNX1-205ENST00000553508 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.82■□□□□ 0.12
PCNX1-205ENST00000553508 RCCD1A6NED2 376 aa15.81■□□□□ 0.12
PCNX1-205ENST00000553508 METTL3Q86U44 580 aaKnown RBP15.81■□□□□ 0.12
PCNX1-205ENST00000553508 IRF6O14896 467 aa15.8■□□□□ 0.12
PCNX1-205ENST00000553508 RNF40O75150 1001 aa15.8■□□□□ 0.12
PCNX1-205ENST00000553508 SWT1Q5T5J6 900 aaKnown RBP15.8■□□□□ 0.12
PCNX1-205ENST00000553508 BARGINQ6ZT62 677 aa15.8■□□□□ 0.12
PCNX1-205ENST00000553508 NLRP7Q8WX94 980 aa15.8■□□□□ 0.12
PCNX1-205ENST00000553508 MINK1Q8N4C8 1332 aaPredicted RBP15.79■□□□□ 0.12
PCNX1-205ENST00000553508 SOWAHBA6NEL2 793 aa15.79■□□□□ 0.12
PCNX1-205ENST00000553508 DNAJB2P25686 324 aa15.79■□□□□ 0.12
PCNX1-205ENST00000553508 CCDC102AQ96A19 550 aa15.77■□□□□ 0.12
PCNX1-205ENST00000553508 PHOX2BQ99453 314 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms