RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 NUTM2GQ5VZR2 741 aa14.03□□□□□ -0.16
TGFBR1-209ENST00000552516 ARHGEF11O15085 1522 aa14.03□□□□□ -0.16
TGFBR1-209ENST00000552516 NAIPQ13075 1403 aa14.02□□□□□ -0.16
TGFBR1-209ENST00000552516 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.17
TGFBR1-209ENST00000552516 HAP1P54257 671 aaPredicted RBP14.02□□□□□ -0.17
TGFBR1-209ENST00000552516 FYCO1Q9BQS8 1478 aa14.02□□□□□ -0.17
TGFBR1-209ENST00000552516 NLRP13Q86W25 1043 aa14.01□□□□□ -0.17
TGFBR1-209ENST00000552516 GGNBP2Q9H3C7 697 aa14.01□□□□□ -0.17
TGFBR1-209ENST00000552516 NUDCQ9Y266 331 aa14.01□□□□□ -0.17
TGFBR1-209ENST00000552516 SCAPERQ9BY12 1400 aa14□□□□□ -0.17
TGFBR1-209ENST00000552516 RBM33Q96EV2 1170 aaKnown RBP14□□□□□ -0.17
TGFBR1-209ENST00000552516 EPRSP07814 1512 aaKnown RBP13.99□□□□□ -0.17
TGFBR1-209ENST00000552516 ABCA10Q8WWZ4 1543 aa13.99□□□□□ -0.17
TGFBR1-209ENST00000552516 UPF2Q9HAU5 1272 aaKnown RBP13.99□□□□□ -0.17
TGFBR1-209ENST00000552516 SLC12A5Q9H2X9 1139 aa13.98□□□□□ -0.17
TGFBR1-209ENST00000552516 ARHGAP5Q13017 1502 aa13.98□□□□□ -0.17
TGFBR1-209ENST00000552516 ADAMTS8Q9UP79 889 aa13.98□□□□□ -0.17
TGFBR1-209ENST00000552516 NECTIN2Q92692 538 aa13.97□□□□□ -0.17
TGFBR1-209ENST00000552516 HMOX1P09601 288 aa13.96□□□□□ -0.17
TGFBR1-209ENST00000552516 RALBP1Q15311 655 aa13.96□□□□□ -0.17
TGFBR1-209ENST00000552516 ANP32EQ9BTT0 268 aa13.96□□□□□ -0.17
TGFBR1-209ENST00000552516 CRBNQ96SW2 442 aa13.96□□□□□ -0.17
TGFBR1-209ENST00000552516 COG6Q9Y2V7 657 aa13.95□□□□□ -0.18
TGFBR1-209ENST00000552516 MYBBP1AQ9BQG0 1328 aaKnown RBP13.95□□□□□ -0.18
TGFBR1-209ENST00000552516 ITPRIPQ8IWB1 547 aa13.94□□□□□ -0.18
TGFBR1-209ENST00000552516 C9orf84Q5VXU9 1444 aa13.94□□□□□ -0.18
TGFBR1-209ENST00000552516 FBLN1P23142 703 aa13.94□□□□□ -0.18
TGFBR1-209ENST00000552516 HFM1A2PYH4 1435 aa13.93□□□□□ -0.18
TGFBR1-209ENST00000552516 DAPK1P53355 1430 aa13.93□□□□□ -0.18
TGFBR1-209ENST00000552516 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
TGFBR1-209ENST00000552516 ZNF330Q9Y3S2 320 aaPredicted RBP13.93□□□□□ -0.18
TGFBR1-209ENST00000552516 RSPH4AQ5TD94 716 aa13.93□□□□□ -0.18
TGFBR1-209ENST00000552516 PEG3Q9GZU2 1588 aa13.93□□□□□ -0.18
TGFBR1-209ENST00000552516 AKNAQ7Z591 1439 aa13.92□□□□□ -0.18
TGFBR1-209ENST00000552516 SLKQ9H2G2 1235 aaPredicted RBP13.92□□□□□ -0.18
TGFBR1-209ENST00000552516 HDGFL2Q7Z4V5 671 aaPredicted RBP13.92□□□□□ -0.18
TGFBR1-209ENST00000552516 IFT140Q96RY7 1462 aa13.91□□□□□ -0.18
TGFBR1-209ENST00000552516 NGDNQ8NEJ9 315 aaKnown RBP13.91□□□□□ -0.18
TGFBR1-209ENST00000552516 TROQ12816 1431 aaPredicted RBP13.91□□□□□ -0.18
TGFBR1-209ENST00000552516 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.18
TGFBR1-209ENST00000552516 MYH16Q9H6N6 1097 aa13.9□□□□□ -0.18
TGFBR1-209ENST00000552516 EIF5BO60841 1220 aaKnown RBP13.9□□□□□ -0.18
TGFBR1-209ENST00000552516 SMC4Q9NTJ3 1288 aa13.9□□□□□ -0.18
TGFBR1-209ENST00000552516 SLC4A10Q6U841 1118 aa13.9□□□□□ -0.18
TGFBR1-209ENST00000552516 NOP58Q9Y2X3 529 aaKnown RBP13.9□□□□□ -0.18
TGFBR1-209ENST00000552516 ABCC5O15440 1437 aa13.9□□□□□ -0.19
TGFBR1-209ENST00000552516 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
TGFBR1-209ENST00000552516 FBXO31Q5XUX0 539 aaPredicted RBP13.88□□□□□ -0.19
TGFBR1-209ENST00000552516 TXNDC2Q86VQ3 553 aa13.88□□□□□ -0.19
TGFBR1-209ENST00000552516 SLC26A8Q96RN1 970 aa13.88□□□□□ -0.19
TGFBR1-209ENST00000552516 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
TGFBR1-209ENST00000552516 PMFBP1Q8TBY8 1022 aa13.87□□□□□ -0.19
TGFBR1-209ENST00000552516 PANK1Q8TE04 598 aa13.87□□□□□ -0.19
TGFBR1-209ENST00000552516 IQGAP2Q13576 1575 aa13.87□□□□□ -0.19
TGFBR1-209ENST00000552516 MTHFSP49914 203 aa13.87□□□□□ -0.19
TGFBR1-209ENST00000552516 CNTLNQ9NXG0 1405 aa13.86□□□□□ -0.19
TGFBR1-209ENST00000552516 ZBED9Q6R2W3 1325 aa13.86□□□□□ -0.19
TGFBR1-209ENST00000552516 RRP1P56182 461 aaKnown RBP13.85□□□□□ -0.19
TGFBR1-209ENST00000552516 GRIN2AQ12879 1464 aa13.85□□□□□ -0.19
TGFBR1-209ENST00000552516 KIAA0586Q9BVV6 1533 aa13.85□□□□□ -0.19
TGFBR1-209ENST00000552516 CEBPAP49715 358 aaPredicted RBP13.85□□□□□ -0.19
TGFBR1-209ENST00000552516 BIVM-ERCC5R4GMW8 1640 aa13.84□□□□□ -0.19
TGFBR1-209ENST00000552516 PRAM1Q96QH2 718 aa13.84□□□□□ -0.19
TGFBR1-209ENST00000552516 NCLP19338 710 aaKnown RBP13.84□□□□□ -0.19
TGFBR1-209ENST00000552516 CCDC9Q9Y3X0 531 aaKnown RBP13.84□□□□□ -0.19
TGFBR1-209ENST00000552516 CENPJQ9HC77 1338 aaPredicted RBP13.84□□□□□ -0.19
TGFBR1-209ENST00000552516 BCAR3O75815 825 aa13.83□□□□□ -0.19
TGFBR1-209ENST00000552516 WAPLQ7Z5K2 1190 aa13.83□□□□□ -0.2
TGFBR1-209ENST00000552516 TSR2Q969E8 191 aaKnown RBP13.83□□□□□ -0.2
TGFBR1-209ENST00000552516 VGFO15240 615 aaPredicted RBP13.83□□□□□ -0.2
TGFBR1-209ENST00000552516 EHBP1L1Q8N3D4 1523 aa13.82□□□□□ -0.2
TGFBR1-209ENST00000552516 KIAA1107Q9UPP5 1409 aa13.82□□□□□ -0.2
TGFBR1-209ENST00000552516 EFCAB5A4FU69 1503 aa13.82□□□□□ -0.2
TGFBR1-209ENST00000552516 NGEFQ8N5V2 710 aa13.82□□□□□ -0.2
TGFBR1-209ENST00000552516 TERF2IPQ9NYB0 399 aa13.82□□□□□ -0.2
TGFBR1-209ENST00000552516 ANKRD30BQ9BXX2 1392 aa13.81□□□□□ -0.2
TGFBR1-209ENST00000552516 MFAP1P55081 439 aaKnown RBP13.81□□□□□ -0.2
TGFBR1-209ENST00000552516 GZF1Q9H116 711 aaPredicted RBP13.81□□□□□ -0.2
TGFBR1-209ENST00000552516 XPCQ01831 940 aaPredicted RBP13.81□□□□□ -0.2
TGFBR1-209ENST00000552516 NOL8Q76FK4 1167 aaKnown RBP13.81□□□□□ -0.2
TGFBR1-209ENST00000552516 ADGRF5Q8IZF2 1346 aa13.81□□□□□ -0.2
TGFBR1-209ENST00000552516 AMPHP49418 695 aa13.81□□□□□ -0.2
TGFBR1-209ENST00000552516 MAPKBP1O60336 1514 aa13.81□□□□□ -0.2
TGFBR1-209ENST00000552516 PPP2R1AP30153 589 aa13.81□□□□□ -0.2
TGFBR1-209ENST00000552516 PTPN23Q9H3S7 1636 aa13.81□□□□□ -0.2
TGFBR1-209ENST00000552516 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
TGFBR1-209ENST00000552516 PNISRQ8TF01 805 aaKnown RBP13.8□□□□□ -0.2
TGFBR1-209ENST00000552516 CAMSAP2Q08AD1 1489 aa13.8□□□□□ -0.2
TGFBR1-209ENST00000552516 LAMC3Q9Y6N6 1575 aa13.8□□□□□ -0.2
TGFBR1-209ENST00000552516 CSB-PGBD3P0DP91 1061 aa13.8□□□□□ -0.2
TGFBR1-209ENST00000552516 RTF1Q92541 710 aaKnown RBP13.8□□□□□ -0.2
TGFBR1-209ENST00000552516 SUPT6HQ7KZ85 1726 aaKnown RBP13.79□□□□□ -0.2
TGFBR1-209ENST00000552516 THUMPD2Q9BTF0 503 aaKnown RBP13.79□□□□□ -0.2
TGFBR1-209ENST00000552516 CABP1Q9NZU7 370 aa13.79□□□□□ -0.2
TGFBR1-209ENST00000552516 OS9Q13438 667 aaPredicted RBP13.79□□□□□ -0.2
TGFBR1-209ENST00000552516 C20orf194Q5TEA3 1177 aa13.79□□□□□ -0.2
TGFBR1-209ENST00000552516 PLEKHH2Q8IVE3 1493 aa13.78□□□□□ -0.2
TGFBR1-209ENST00000552516 RIPK4P57078 832 aa13.78□□□□□ -0.2
TGFBR1-209ENST00000552516 EIF3AQ14152 1382 aaKnown RBP13.78□□□□□ -0.2
TGFBR1-209ENST00000552516 MAGI1Q96QZ7 1491 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms