RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-208ENST00000551009 KCNC4Q03721 635 aa13.06□□□□□ -0.32
ATP2B1-208ENST00000551009 JPH4Q96JJ6 628 aa13.05□□□□□ -0.32
ATP2B1-208ENST00000551009 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
ATP2B1-208ENST00000551009 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
ATP2B1-208ENST00000551009 SOWAHBA6NEL2 793 aa13.02□□□□□ -0.33
ATP2B1-208ENST00000551009 RABGEF1Q9UJ41 708 aa13.02□□□□□ -0.33
ATP2B1-208ENST00000551009 PROX2Q3B8N5 592 aa13.01□□□□□ -0.33
ATP2B1-208ENST00000551009 SPRYD3Q8NCJ5 442 aa13□□□□□ -0.33
ATP2B1-208ENST00000551009 WBP1LQ9NX94 342 aa13□□□□□ -0.33
ATP2B1-208ENST00000551009 ZBTB4Q9P1Z0 1013 aaPredicted RBP13□□□□□ -0.33
ATP2B1-208ENST00000551009 NYAP1Q6ZVC0 841 aa12.99□□□□□ -0.33
ATP2B1-208ENST00000551009 EMILIN3Q9NT22 766 aa12.98□□□□□ -0.33
ATP2B1-208ENST00000551009 PPP1R3GB7ZBB8 358 aa12.96□□□□□ -0.33
ATP2B1-208ENST00000551009 NRG2O14511 850 aaPredicted RBP12.94□□□□□ -0.34
ATP2B1-208ENST00000551009 EVI5O60447 810 aa12.94□□□□□ -0.34
ATP2B1-208ENST00000551009 ZNF787Q6DD87 383 aa12.94□□□□□ -0.34
ATP2B1-208ENST00000551009 COL9A1P20849 921 aa12.93□□□□□ -0.34
ATP2B1-208ENST00000551009 PAXIP1Q6ZW49 1069 aaPredicted RBP12.93□□□□□ -0.34
ATP2B1-208ENST00000551009 LAPTM4BQ86VI4 370 aa12.93□□□□□ -0.34
ATP2B1-208ENST00000551009 ZFRQ96KR1 1074 aaKnown RBP12.93□□□□□ -0.34
ATP2B1-208ENST00000551009 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
ATP2B1-208ENST00000551009 ZNF775Q96BV0 537 aaPredicted RBP12.91□□□□□ -0.34
ATP2B1-208ENST00000551009 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
ATP2B1-208ENST00000551009 CAMK2BQ13554 666 aa12.89□□□□□ -0.35
ATP2B1-208ENST00000551009 PRKD2Q9BZL6 878 aa12.88□□□□□ -0.35
ATP2B1-208ENST00000551009 KIAA1468Q9P260 1216 aa12.87□□□□□ -0.35
ATP2B1-208ENST00000551009 PCDHGA10Q9Y5H3 936 aa12.84□□□□□ -0.35
ATP2B1-208ENST00000551009 SEPT9Q9UHD8 586 aaPredicted RBP12.83□□□□□ -0.36
ATP2B1-208ENST00000551009 DPYSL4O14531 572 aa12.82□□□□□ -0.36
ATP2B1-208ENST00000551009 TSR3Q9UJK0 312 aaKnown RBP12.81□□□□□ -0.36
ATP2B1-208ENST00000551009 HPS5Q9UPZ3 1129 aa12.81□□□□□ -0.36
ATP2B1-208ENST00000551009 ONECUT3O60422 494 aaPredicted RBP12.77□□□□□ -0.37
ATP2B1-208ENST00000551009 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.77□□□□□ -0.37
ATP2B1-208ENST00000551009 V9GY48 417 aaPredicted RBP12.76□□□□□ -0.37
ATP2B1-208ENST00000551009 FAM98CQ17RN3 349 aaKnown RBP12.74□□□□□ -0.37
ATP2B1-208ENST00000551009 TJAP1Q5JTD0 557 aa12.74□□□□□ -0.37
ATP2B1-208ENST00000551009 LRCH3Q96II8 777 aa12.74□□□□□ -0.37
ATP2B1-208ENST00000551009 PPP1R18Q6NYC8 613 aa12.73□□□□□ -0.37
ATP2B1-208ENST00000551009 PHF14O94880 888 aa12.72□□□□□ -0.37
ATP2B1-208ENST00000551009 TYW1BQ6NUM6 668 aa12.72□□□□□ -0.37
ATP2B1-208ENST00000551009 PDZRN3Q9UPQ7 1066 aa12.72□□□□□ -0.37
ATP2B1-208ENST00000551009 E2F4Q16254 413 aa12.71□□□□□ -0.37
ATP2B1-208ENST00000551009 FBXW7Q969H0 707 aa12.7□□□□□ -0.38
ATP2B1-208ENST00000551009 TRIM6-TRIM34B2RNG4 842 aa12.69□□□□□ -0.38
ATP2B1-208ENST00000551009 PDIA6Q15084 440 aa12.69□□□□□ -0.38
ATP2B1-208ENST00000551009 WDR70Q9NW82 654 aa12.69□□□□□ -0.38
ATP2B1-208ENST00000551009 DDX12PQ92771 950 aa12.67□□□□□ -0.38
ATP2B1-208ENST00000551009 EPAS1Q99814 870 aa12.66□□□□□ -0.38
ATP2B1-208ENST00000551009 C6orf132Q5T0Z8 1188 aa12.65□□□□□ -0.38
ATP2B1-208ENST00000551009 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
ATP2B1-208ENST00000551009 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.64□□□□□ -0.39
ATP2B1-208ENST00000551009 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
ATP2B1-208ENST00000551009 PPP4CP60510 307 aa12.63□□□□□ -0.39
ATP2B1-208ENST00000551009 MTRQ99707 1265 aa12.63□□□□□ -0.39
ATP2B1-208ENST00000551009 ARIH1Q9Y4X5 557 aaPredicted RBP12.63□□□□□ -0.39
ATP2B1-208ENST00000551009 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
ATP2B1-208ENST00000551009 IL21Q9HBE4 155 aa12.61□□□□□ -0.39
ATP2B1-208ENST00000551009 NBR1Q14596 966 aa12.59□□□□□ -0.39
ATP2B1-208ENST00000551009 ZNF516Q92618 1163 aa12.59□□□□□ -0.39
ATP2B1-208ENST00000551009 POTECB2RU33 542 aa12.58□□□□□ -0.4
ATP2B1-208ENST00000551009 EN1Q05925 392 aaPredicted RBP12.56□□□□□ -0.4
ATP2B1-208ENST00000551009 MAP3K7O43318 606 aa12.53□□□□□ -0.4
ATP2B1-208ENST00000551009 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
ATP2B1-208ENST00000551009 NKX2-3Q8TAU0 364 aa12.53□□□□□ -0.4
ATP2B1-208ENST00000551009 TSKSQ9UJT2 592 aa12.53□□□□□ -0.4
ATP2B1-208ENST00000551009 GRXCR2A6NFK2 248 aa12.52□□□□□ -0.41
ATP2B1-208ENST00000551009 LCE2AQ5TA79 106 aaPredicted RBP12.52□□□□□ -0.41
ATP2B1-208ENST00000551009 TRIM67Q6ZTA4 783 aa12.52□□□□□ -0.41
ATP2B1-208ENST00000551009 SAMD7Q7Z3H4 446 aa12.52□□□□□ -0.41
ATP2B1-208ENST00000551009 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
ATP2B1-208ENST00000551009 MYT1Q01538 1121 aa12.51□□□□□ -0.41
ATP2B1-208ENST00000551009 TREML4Q6UXN2 200 aa12.48□□□□□ -0.41
ATP2B1-208ENST00000551009 PACS2Q86VP3 889 aa12.48□□□□□ -0.41
ATP2B1-208ENST00000551009 KCNV2Q8TDN2 545 aa12.47□□□□□ -0.41
ATP2B1-208ENST00000551009 SMAPO00193 183 aa12.46□□□□□ -0.41
ATP2B1-208ENST00000551009 OSBPP22059 807 aa12.46□□□□□ -0.41
ATP2B1-208ENST00000551009 PLCB2Q00722 1185 aa12.44□□□□□ -0.42
ATP2B1-208ENST00000551009 PKDCCQ504Y2 493 aa12.44□□□□□ -0.42
ATP2B1-208ENST00000551009 APLP1P51693 650 aa12.43□□□□□ -0.42
ATP2B1-208ENST00000551009 ARHGEF1Q92888 912 aaKnown RBP12.43□□□□□ -0.42
ATP2B1-208ENST00000551009 DGAT1O75907 488 aa12.42□□□□□ -0.42
ATP2B1-208ENST00000551009 CDHR5Q9HBB8 845 aa12.41□□□□□ -0.42
ATP2B1-208ENST00000551009 C3orf80F5H4A9 247 aa12.4□□□□□ -0.42
ATP2B1-208ENST00000551009 GGCXP38435 758 aa12.4□□□□□ -0.42
ATP2B1-208ENST00000551009 EMID1Q96A84 441 aaPredicted RBP12.4□□□□□ -0.42
ATP2B1-208ENST00000551009 CDCA7LQ96GN5 454 aa12.39□□□□□ -0.43
ATP2B1-208ENST00000551009 TMUB1Q9BVT8 246 aa12.39□□□□□ -0.43
ATP2B1-208ENST00000551009 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
ATP2B1-208ENST00000551009 PRSS12P56730 875 aa12.38□□□□□ -0.43
ATP2B1-208ENST00000551009 MLLT3P42568 568 aaPredicted RBP12.37□□□□□ -0.43
ATP2B1-208ENST00000551009 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
ATP2B1-208ENST00000551009 SLC19A1P41440 591 aa12.35□□□□□ -0.43
ATP2B1-208ENST00000551009 COPS2P61201 443 aa12.34□□□□□ -0.43
ATP2B1-208ENST00000551009 PRR20EP86478 221 aa12.33□□□□□ -0.44
ATP2B1-208ENST00000551009 PRR20CP86479 221 aa12.33□□□□□ -0.44
ATP2B1-208ENST00000551009 PRR20DP86480 221 aa12.33□□□□□ -0.44
ATP2B1-208ENST00000551009 PRR20BP86481 221 aa12.33□□□□□ -0.44
ATP2B1-208ENST00000551009 PRR20AP86496 221 aa12.33□□□□□ -0.44
ATP2B1-208ENST00000551009 P3H3Q8IVL6 736 aa12.33□□□□□ -0.44
ATP2B1-208ENST00000551009 RNF40O75150 1001 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms