RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 SLC4A5Q9BY07 1137 aa12.34□□□□□ -0.43
USP15-213ENST00000549268 EN1Q05925 392 aaPredicted RBP12.33□□□□□ -0.44
USP15-213ENST00000549268 GRXCR2A6NFK2 248 aa12.32□□□□□ -0.44
USP15-213ENST00000549268 OSBPP22059 807 aa12.32□□□□□ -0.44
USP15-213ENST00000549268 C6orf132Q5T0Z8 1188 aa12.31□□□□□ -0.44
USP15-213ENST00000549268 DMRTA1Q5VZB9 504 aa12.31□□□□□ -0.44
USP15-213ENST00000549268 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
USP15-213ENST00000549268 PPP1R3GB7ZBB8 358 aa12.3□□□□□ -0.44
USP15-213ENST00000549268 ADGRD1Q6QNK2 874 aa12.29□□□□□ -0.44
USP15-213ENST00000549268 SEMA3EO15041 775 aa12.28□□□□□ -0.44
USP15-213ENST00000549268 MLLT3P42568 568 aaPredicted RBP12.28□□□□□ -0.44
USP15-213ENST00000549268 ZBED2Q9BTP6 218 aa12.28□□□□□ -0.44
USP15-213ENST00000549268 MAP3K7O43318 606 aa12.27□□□□□ -0.45
USP15-213ENST00000549268 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
USP15-213ENST00000549268 TESPA1A2RU30 521 aaPredicted RBP12.26□□□□□ -0.45
USP15-213ENST00000549268 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
USP15-213ENST00000549268 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
USP15-213ENST00000549268 COL9A1P20849 921 aa12.25□□□□□ -0.45
USP15-213ENST00000549268 HRO43593 1189 aa12.24□□□□□ -0.45
USP15-213ENST00000549268 BCANQ96GW7 911 aa12.24□□□□□ -0.45
USP15-213ENST00000549268 CERKQ8TCT0 537 aa12.23□□□□□ -0.45
USP15-213ENST00000549268 ONECUT3O60422 494 aaPredicted RBP12.22□□□□□ -0.45
USP15-213ENST00000549268 MMRN1Q13201 1228 aa12.22□□□□□ -0.45
USP15-213ENST00000549268 TSR1Q2NL82 804 aaKnown RBP12.22□□□□□ -0.45
USP15-213ENST00000549268 SMYD5Q6GMV2 418 aa12.22□□□□□ -0.45
USP15-213ENST00000549268 BHMG1C9JSJ3 638 aaPredicted RBP12.18□□□□□ -0.46
USP15-213ENST00000549268 MYT1LQ9UL68 1186 aa12.18□□□□□ -0.46
USP15-213ENST00000549268 RABGEF1Q9UJ41 708 aa12.17□□□□□ -0.46
USP15-213ENST00000549268 TRIM6-TRIM34B2RNG4 842 aa12.15□□□□□ -0.46
USP15-213ENST00000549268 PROX2Q3B8N5 592 aa12.15□□□□□ -0.46
USP15-213ENST00000549268 RBM27Q9P2N5 1060 aaKnown RBP12.15□□□□□ -0.46
USP15-213ENST00000549268 CDHR5Q9HBB8 845 aa12.14□□□□□ -0.47
USP15-213ENST00000549268 NPDC1Q9NQX5 325 aaPredicted RBP12.14□□□□□ -0.47
USP15-213ENST00000549268 PRSS12P56730 875 aa12.13□□□□□ -0.47
USP15-213ENST00000549268 NBPF3Q9H094 633 aa12.13□□□□□ -0.47
USP15-213ENST00000549268 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
USP15-213ENST00000549268 STAC3Q96MF2 364 aa12.12□□□□□ -0.47
USP15-213ENST00000549268 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
USP15-213ENST00000549268 PTGDRQ13258 359 aa12.1□□□□□ -0.47
USP15-213ENST00000549268 LAPTM4BQ86VI4 370 aa12.1□□□□□ -0.47
USP15-213ENST00000549268 KIAA1468Q9P260 1216 aa12.1□□□□□ -0.47
USP15-213ENST00000549268 PACS2Q86VP3 889 aa12.09□□□□□ -0.47
USP15-213ENST00000549268 TSKSQ9UJT2 592 aa12.09□□□□□ -0.47
USP15-213ENST00000549268 TULP1O00294 542 aaPredicted RBP12.08□□□□□ -0.48
USP15-213ENST00000549268 MRPL50Q8N5N7 158 aaKnown RBP12.08□□□□□ -0.48
USP15-213ENST00000549268 TTC13Q8NBP0 860 aa12.08□□□□□ -0.48
USP15-213ENST00000549268 NUTM2FA1L443 756 aa12.07□□□□□ -0.48
USP15-213ENST00000549268 RBM26Q5T8P6 1007 aaKnown RBP12.07□□□□□ -0.48
USP15-213ENST00000549268 FCHSD2O94868 740 aa12.05□□□□□ -0.48
USP15-213ENST00000549268 FAM198AQ9UFP1 575 aa12.04□□□□□ -0.48
USP15-213ENST00000549268 NBPF26B4DH59 902 aa12.01□□□□□ -0.49
USP15-213ENST00000549268 HIC1Q14526 733 aa12.01□□□□□ -0.49
USP15-213ENST00000549268 FAM98CQ17RN3 349 aaKnown RBP12.01□□□□□ -0.49
USP15-213ENST00000549268 PADI6Q6TGC4 694 aa12.01□□□□□ -0.49
USP15-213ENST00000549268 GOLGA8CPA6NN73 597 aa12□□□□□ -0.49
USP15-213ENST00000549268 TATDN2Q93075 761 aa12□□□□□ -0.49
USP15-213ENST00000549268 GPR37O15354 613 aa11.99□□□□□ -0.49
USP15-213ENST00000549268 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP15-213ENST00000549268 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
USP15-213ENST00000549268 GPIHBP1Q8IV16 184 aa11.97□□□□□ -0.49
USP15-213ENST00000549268 KCTD12Q96CX2 325 aaKnown RBP11.97□□□□□ -0.49
USP15-213ENST00000549268 ZFRQ96KR1 1074 aaKnown RBP11.97□□□□□ -0.49
USP15-213ENST00000549268 WNT2BQ93097 391 aa11.96□□□□□ -0.49
USP15-213ENST00000549268 HCSTQ9UBK5 93 aa11.96□□□□□ -0.49
USP15-213ENST00000549268 PNMA3Q9UL41 463 aa11.96□□□□□ -0.49
USP15-213ENST00000549268 C3orf80F5H4A9 247 aa11.95□□□□□ -0.5
USP15-213ENST00000549268 GNPATO15228 680 aa11.95□□□□□ -0.5
USP15-213ENST00000549268 NUDT18Q6ZVK8 323 aa11.95□□□□□ -0.5
USP15-213ENST00000549268 ANKK1Q8NFD2 765 aa11.95□□□□□ -0.5
USP15-213ENST00000549268 THSD4Q6ZMP0 1018 aa11.94□□□□□ -0.5
USP15-213ENST00000549268 EYA1Q99502 592 aa11.93□□□□□ -0.5
USP15-213ENST00000549268 SOWAHBA6NEL2 793 aa11.92□□□□□ -0.5
USP15-213ENST00000549268 ADGRG1Q9Y653 693 aa11.92□□□□□ -0.5
USP15-213ENST00000549268 SMAPO00193 183 aa11.91□□□□□ -0.5
USP15-213ENST00000549268 LMOD2Q6P5Q4 547 aa11.9□□□□□ -0.5
USP15-213ENST00000549268 RBM46Q8TBY0 533 aaKnown RBP11.9□□□□□ -0.5
USP15-213ENST00000549268 OATP04181 439 aa11.89□□□□□ -0.51
USP15-213ENST00000549268 LRCH3Q96II8 777 aa11.87□□□□□ -0.51
USP15-213ENST00000549268 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.87□□□□□ -0.51
USP15-213ENST00000549268 FECHP22830 423 aa11.86□□□□□ -0.51
USP15-213ENST00000549268 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
USP15-213ENST00000549268 BCAMP50895 628 aa11.84□□□□□ -0.51
USP15-213ENST00000549268 NYAP1Q6ZVC0 841 aa11.84□□□□□ -0.51
USP15-213ENST00000549268 SAMD7Q7Z3H4 446 aa11.84□□□□□ -0.51
USP15-213ENST00000549268 PXYLP1Q8TE99 480 aa11.84□□□□□ -0.51
USP15-213ENST00000549268 DNAJB2P25686 324 aa11.83□□□□□ -0.52
USP15-213ENST00000549268 PTPN5P54829 565 aa11.83□□□□□ -0.52
USP15-213ENST00000549268 TSR3Q9UJK0 312 aaKnown RBP11.83□□□□□ -0.52
USP15-213ENST00000549268 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.82□□□□□ -0.52
USP15-213ENST00000549268 MAP2K5Q13163 448 aa11.82□□□□□ -0.52
USP15-213ENST00000549268 TPRNQ4KMQ1 711 aa11.82□□□□□ -0.52
USP15-213ENST00000549268 METTL3Q86U44 580 aaKnown RBP11.82□□□□□ -0.52
USP15-213ENST00000549268 FAM161AQ3B820 660 aa11.81□□□□□ -0.52
USP15-213ENST00000549268 TMEM134Q9H6X4 195 aa11.81□□□□□ -0.52
USP15-213ENST00000549268 RCCD1A6NED2 376 aa11.8□□□□□ -0.52
USP15-213ENST00000549268 PRKCSHP14314 528 aaPredicted RBP11.79□□□□□ -0.52
USP15-213ENST00000549268 SWT1Q5T5J6 900 aaKnown RBP11.79□□□□□ -0.52
USP15-213ENST00000549268 NECTIN2Q92692 538 aa11.79□□□□□ -0.52
USP15-213ENST00000549268 MINK1Q8N4C8 1332 aaPredicted RBP11.79□□□□□ -0.52
USP15-213ENST00000549268 SLF2Q8IX21 1173 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms