RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 NPDC1Q9NQX5 325 aaPredicted RBP16.53■□□□□ 0.24
MRPS35-204ENST00000542199 RB1CC1Q8TDY2 1594 aa16.52■□□□□ 0.24
MRPS35-204ENST00000542199 ZDHHC16Q969W1 377 aa16.52■□□□□ 0.24
MRPS35-204ENST00000542199 AK7Q96M32 723 aa16.52■□□□□ 0.24
MRPS35-204ENST00000542199 HOXB1P14653 301 aaPredicted RBP16.51■□□□□ 0.23
MRPS35-204ENST00000542199 ADAM33Q9BZ11 813 aa16.51■□□□□ 0.23
MRPS35-204ENST00000542199 MAP2K5Q13163 448 aa16.49■□□□□ 0.23
MRPS35-204ENST00000542199 CCDC102AQ96A19 550 aa16.48■□□□□ 0.23
MRPS35-204ENST00000542199 NEUROD2Q15784 382 aa16.47■□□□□ 0.23
MRPS35-204ENST00000542199 C6orf132Q5T0Z8 1188 aa16.46■□□□□ 0.23
MRPS35-204ENST00000542199 NACADO15069 1562 aa16.46■□□□□ 0.23
MRPS35-204ENST00000542199 MINK1Q8N4C8 1332 aaPredicted RBP16.45■□□□□ 0.22
MRPS35-204ENST00000542199 TRIM66O15016 1216 aa16.45■□□□□ 0.22
MRPS35-204ENST00000542199 IRF6O14896 467 aa16.44■□□□□ 0.22
MRPS35-204ENST00000542199 PPP4R3BQ5MIZ7 849 aa16.42■□□□□ 0.22
MRPS35-204ENST00000542199 GPBP1L1Q9HC44 474 aaPredicted RBP16.39■□□□□ 0.21
MRPS35-204ENST00000542199 PSDA5PKW4 1024 aaPredicted RBP16.37■□□□□ 0.21
MRPS35-204ENST00000542199 PDE4DQ08499 809 aa16.37■□□□□ 0.21
MRPS35-204ENST00000542199 PADI6Q6TGC4 694 aa16.36■□□□□ 0.21
MRPS35-204ENST00000542199 COL9A1P20849 921 aa16.35■□□□□ 0.21
MRPS35-204ENST00000542199 BCL2L12Q9HB09 334 aa16.35■□□□□ 0.21
MRPS35-204ENST00000542199 ST18O60284 1047 aa16.34■□□□□ 0.21
MRPS35-204ENST00000542199 FAM161AQ3B820 660 aa16.33■□□□□ 0.2
MRPS35-204ENST00000542199 CERKQ8TCT0 537 aa16.32■□□□□ 0.2
MRPS35-204ENST00000542199 MYO15BQ96JP2 1530 aa16.32■□□□□ 0.2
MRPS35-204ENST00000542199 MARVELD3Q96A59 401 aa16.29■□□□□ 0.2
MRPS35-204ENST00000542199 PTPREP23469 700 aa16.28■□□□□ 0.2
MRPS35-204ENST00000542199 AMHR2Q16671 573 aa16.28■□□□□ 0.2
MRPS35-204ENST00000542199 KDM4CQ9H3R0 1056 aa16.28■□□□□ 0.2
MRPS35-204ENST00000542199 PRSS12P56730 875 aa16.27■□□□□ 0.2
MRPS35-204ENST00000542199 TTC13Q8NBP0 860 aa16.27■□□□□ 0.2
MRPS35-204ENST00000542199 CDCA7LQ96GN5 454 aa16.27■□□□□ 0.2
MRPS35-204ENST00000542199 VARS2Q5ST30 1063 aaKnown RBP16.26■□□□□ 0.19
MRPS35-204ENST00000542199 PARP9Q8IXQ6 854 aa16.26■□□□□ 0.19
MRPS35-204ENST00000542199 PHOX2BQ99453 314 aa16.26■□□□□ 0.19
MRPS35-204ENST00000542199 FAM198AQ9UFP1 575 aa16.26■□□□□ 0.19
MRPS35-204ENST00000542199 ERBB3P21860 1342 aa16.25■□□□□ 0.19
MRPS35-204ENST00000542199 PPP1R3GB7ZBB8 358 aa16.25■□□□□ 0.19
MRPS35-204ENST00000542199 TMEM132AQ24JP5 1023 aa16.25■□□□□ 0.19
MRPS35-204ENST00000542199 KCNK17Q96T54 332 aa16.25■□□□□ 0.19
MRPS35-204ENST00000542199 RBM27Q9P2N5 1060 aaKnown RBP16.25■□□□□ 0.19
MRPS35-204ENST00000542199 EMP3P54852 163 aa16.24■□□□□ 0.19
MRPS35-204ENST00000542199 ADGRG1Q9Y653 693 aa16.24■□□□□ 0.19
MRPS35-204ENST00000542199 FAM163AQ96GL9 167 aaPredicted RBP16.22■□□□□ 0.19
MRPS35-204ENST00000542199 TTLL12Q14166 644 aaPredicted RBP16.21■□□□□ 0.19
MRPS35-204ENST00000542199 NLRP7Q8WX94 980 aa16.21■□□□□ 0.19
MRPS35-204ENST00000542199 TSKSQ9UJT2 592 aa16.21■□□□□ 0.19
MRPS35-204ENST00000542199 METTL3Q86U44 580 aaKnown RBP16.2■□□□□ 0.18
MRPS35-204ENST00000542199 PSEN2P49810 448 aa16.19■□□□□ 0.18
MRPS35-204ENST00000542199 POTEEQ6S8J3 1075 aa16.19■□□□□ 0.18
MRPS35-204ENST00000542199 REPIN1Q9BWE0 567 aaKnown RBP16.19■□□□□ 0.18
MRPS35-204ENST00000542199 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
MRPS35-204ENST00000542199 FAM205CA6NFA0 338 aa16.17■□□□□ 0.18
MRPS35-204ENST00000542199 C3orf80F5H4A9 247 aa16.17■□□□□ 0.18
MRPS35-204ENST00000542199 PROX2Q3B8N5 592 aa16.17■□□□□ 0.18
MRPS35-204ENST00000542199 LCE2DQ5TA82 110 aaPredicted RBP16.17■□□□□ 0.18
MRPS35-204ENST00000542199 MDM2Q00987 491 aaPredicted RBP16.16■□□□□ 0.18
MRPS35-204ENST00000542199 PXYLP1Q8TE99 480 aa16.16■□□□□ 0.18
MRPS35-204ENST00000542199 AXIN2Q9Y2T1 843 aa16.15■□□□□ 0.18
MRPS35-204ENST00000542199 OATP04181 439 aa16.14■□□□□ 0.17
MRPS35-204ENST00000542199 GIGYF2Q6Y7W6 1299 aaKnown RBP16.14■□□□□ 0.17
MRPS35-204ENST00000542199 IL27Q8NEV9 243 aa16.14■□□□□ 0.17
MRPS35-204ENST00000542199 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.17
MRPS35-204ENST00000542199 POTEB3A0JP26 581 aa16.13■□□□□ 0.17
MRPS35-204ENST00000542199 TRIM6-TRIM34B2RNG4 842 aa16.13■□□□□ 0.17
MRPS35-204ENST00000542199 POTEBQ6S5H4 581 aa16.13■□□□□ 0.17
MRPS35-204ENST00000542199 FAM117AQ9C073 453 aa16.13■□□□□ 0.17
MRPS35-204ENST00000542199 TMUB1Q9BVT8 246 aa16.12■□□□□ 0.17
MRPS35-204ENST00000542199 DMRTA1Q5VZB9 504 aa16.1■□□□□ 0.17
MRPS35-204ENST00000542199 ZBED2Q9BTP6 218 aa16.1■□□□□ 0.17
MRPS35-204ENST00000542199 ARHGAP33O14559 1287 aa16.09■□□□□ 0.17
MRPS35-204ENST00000542199 MS4A1P11836 297 aa16.09■□□□□ 0.17
MRPS35-204ENST00000542199 NUDT18Q6ZVK8 323 aa16.09■□□□□ 0.17
MRPS35-204ENST00000542199 KCNH8Q96L42 1107 aa16.09■□□□□ 0.17
MRPS35-204ENST00000542199 CLCN1P35523 988 aa16.08■□□□□ 0.16
MRPS35-204ENST00000542199 RBM46Q8TBY0 533 aaKnown RBP16.08■□□□□ 0.16
MRPS35-204ENST00000542199 HS3ST6Q96QI5 342 aa16.08■□□□□ 0.16
MRPS35-204ENST00000542199 EYA1Q99502 592 aa16.08■□□□□ 0.16
MRPS35-204ENST00000542199 GPCPD1Q9NPB8 672 aa16.08■□□□□ 0.16
MRPS35-204ENST00000542199 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.16
MRPS35-204ENST00000542199 SMAPO00193 183 aa16.07■□□□□ 0.16
MRPS35-204ENST00000542199 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
MRPS35-204ENST00000542199 PNMA3Q9UL41 463 aa16.06■□□□□ 0.16
MRPS35-204ENST00000542199 PLEKHG3A1L390 1219 aa16.05■□□□□ 0.16
MRPS35-204ENST00000542199 NBPF26B4DH59 902 aa16.05■□□□□ 0.16
MRPS35-204ENST00000542199 ZNF687Q8N1G0 1237 aa16.05■□□□□ 0.16
MRPS35-204ENST00000542199 TATDN2Q93075 761 aa16.05■□□□□ 0.16
MRPS35-204ENST00000542199 RCCD1A6NED2 376 aa16.04■□□□□ 0.16
MRPS35-204ENST00000542199 PACS2Q86VP3 889 aa16.03■□□□□ 0.16
MRPS35-204ENST00000542199 KIAA1468Q9P260 1216 aa16.03■□□□□ 0.16
MRPS35-204ENST00000542199 PBX2P40425 430 aa16.01■□□□□ 0.15
MRPS35-204ENST00000542199 FAM217BQ9NTX9 383 aaPredicted RBP16■□□□□ 0.15
MRPS35-204ENST00000542199 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.99■□□□□ 0.15
MRPS35-204ENST00000542199 ONECUT3O60422 494 aaPredicted RBP15.99■□□□□ 0.15
MRPS35-204ENST00000542199 SSTR3P32745 418 aaPredicted RBP15.99■□□□□ 0.15
MRPS35-204ENST00000542199 DDRGK1Q96HY6 314 aa15.99■□□□□ 0.15
MRPS35-204ENST00000542199 GTF3C3Q9Y5Q9 886 aa15.98■□□□□ 0.15
MRPS35-204ENST00000542199 SLC4A5Q9BY07 1137 aa15.96■□□□□ 0.15
MRPS35-204ENST00000542199 SEPT9Q9UHD8 586 aaPredicted RBP15.96■□□□□ 0.15
MRPS35-204ENST00000542199 DNAJB2P25686 324 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms