RNA–Protein interactions for RNA: ENST00000541404.1

LINC02390-201, Transcript of long intergenic non-protein coding RNA 2390, humanhuman

TSL 4 BASIC

Gene LINC02390, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02390-201ENST00000541404 PCDHGA10Q9Y5H3 936 aa8.42□□□□□ -1.06
LINC02390-201ENST00000541404 GOLGA8CPA6NN73 597 aa8.41□□□□□ -1.06
LINC02390-201ENST00000541404 PAXIP1Q6ZW49 1069 aaPredicted RBP8.41□□□□□ -1.06
LINC02390-201ENST00000541404 ZBED2Q9BTP6 218 aa8.4□□□□□ -1.06
LINC02390-201ENST00000541404 CC2D2AQ9P2K1 1620 aa8.4□□□□□ -1.07
LINC02390-201ENST00000541404 MRPL50Q8N5N7 158 aaKnown RBP8.39□□□□□ -1.07
LINC02390-201ENST00000541404 CECR2Q9BXF3 1484 aa8.38□□□□□ -1.07
LINC02390-201ENST00000541404 SHROOM4Q9ULL8 1493 aa8.38□□□□□ -1.07
LINC02390-201ENST00000541404 SCRIBQ14160 1630 aa8.38□□□□□ -1.07
LINC02390-201ENST00000541404 CAMK2BQ13554 666 aa8.37□□□□□ -1.07
LINC02390-201ENST00000541404 PROX2Q3B8N5 592 aa8.37□□□□□ -1.07
LINC02390-201ENST00000541404 TYW1BQ6NUM6 668 aa8.37□□□□□ -1.07
LINC02390-201ENST00000541404 DDX12PQ92771 950 aa8.37□□□□□ -1.07
LINC02390-201ENST00000541404 RBM33Q96EV2 1170 aaKnown RBP8.37□□□□□ -1.07
LINC02390-201ENST00000541404 SLC4A5Q9BY07 1137 aa8.37□□□□□ -1.07
LINC02390-201ENST00000541404 BHMG1C9JSJ3 638 aaPredicted RBP8.36□□□□□ -1.07
LINC02390-201ENST00000541404 PHF14O94880 888 aa8.36□□□□□ -1.07
LINC02390-201ENST00000541404 COL9A1P20849 921 aa8.36□□□□□ -1.07
LINC02390-201ENST00000541404 WNT2BQ93097 391 aa8.36□□□□□ -1.07
LINC02390-201ENST00000541404 PPP1R3GB7ZBB8 358 aa8.35□□□□□ -1.07
LINC02390-201ENST00000541404 FBXW7Q969H0 707 aa8.35□□□□□ -1.07
LINC02390-201ENST00000541404 NBPF3Q9H094 633 aa8.35□□□□□ -1.07
LINC02390-201ENST00000541404 EIF4G1Q04637 1599 aaKnown RBP8.34□□□□□ -1.07
LINC02390-201ENST00000541404 WDR70Q9NW82 654 aa8.33□□□□□ -1.08
LINC02390-201ENST00000541404 NBR1Q14596 966 aa8.32□□□□□ -1.08
LINC02390-201ENST00000541404 C6orf132Q5T0Z8 1188 aa8.32□□□□□ -1.08
LINC02390-201ENST00000541404 THSD4Q6ZMP0 1018 aa8.32□□□□□ -1.08
LINC02390-201ENST00000541404 EPAS1Q99814 870 aa8.31□□□□□ -1.08
LINC02390-201ENST00000541404 KIAA1468Q9P260 1216 aa8.3□□□□□ -1.08
LINC02390-201ENST00000541404 RABGEF1Q9UJ41 708 aa8.3□□□□□ -1.08
LINC02390-201ENST00000541404 MAP3K7O43318 606 aa8.29□□□□□ -1.08
LINC02390-201ENST00000541404 E2F4Q16254 413 aa8.29□□□□□ -1.08
LINC02390-201ENST00000541404 GRXCR2A6NFK2 248 aa8.28□□□□□ -1.08
LINC02390-201ENST00000541404 SEPT9Q9UHD8 586 aaPredicted RBP8.28□□□□□ -1.08
LINC02390-201ENST00000541404 TSR1Q2NL82 804 aaKnown RBP8.27□□□□□ -1.09
LINC02390-201ENST00000541404 ANKK1Q8NFD2 765 aa8.27□□□□□ -1.09
LINC02390-201ENST00000541404 BCAMP50895 628 aa8.26□□□□□ -1.09
LINC02390-201ENST00000541404 PDIA6Q15084 440 aa8.26□□□□□ -1.09
LINC02390-201ENST00000541404 TRIM6-TRIM34B2RNG4 842 aa8.24□□□□□ -1.09
LINC02390-201ENST00000541404 EN1Q05925 392 aaPredicted RBP8.24□□□□□ -1.09
LINC02390-201ENST00000541404 SPDYE16A6NNV3 312 aaPredicted RBP8.23□□□□□ -1.09
LINC02390-201ENST00000541404 ZFRQ96KR1 1074 aaKnown RBP8.23□□□□□ -1.09
LINC02390-201ENST00000541404 LAPTM4BQ86VI4 370 aa8.21□□□□□ -1.1
LINC02390-201ENST00000541404 SOWAHBA6NEL2 793 aa8.2□□□□□ -1.1
LINC02390-201ENST00000541404 PACS2Q86VP3 889 aa8.2□□□□□ -1.1
LINC02390-201ENST00000541404 ONECUT3O60422 494 aaPredicted RBP8.19□□□□□ -1.1
LINC02390-201ENST00000541404 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
LINC02390-201ENST00000541404 SMAPO00193 183 aa8.18□□□□□ -1.1
LINC02390-201ENST00000541404 PRIM1P49642 420 aaKnown RBP8.18□□□□□ -1.1
LINC02390-201ENST00000541404 FAM98CQ17RN3 349 aaKnown RBP8.18□□□□□ -1.1
LINC02390-201ENST00000541404 WBP1LQ9NX94 342 aa8.18□□□□□ -1.1
LINC02390-201ENST00000541404 CDCA7LQ96GN5 454 aa8.17□□□□□ -1.1
LINC02390-201ENST00000541404 LRCH3Q96II8 777 aa8.17□□□□□ -1.1
LINC02390-201ENST00000541404 TSHZ2Q9NRE2 1034 aa8.17□□□□□ -1.1
LINC02390-201ENST00000541404 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.17□□□□□ -1.1
LINC02390-201ENST00000541404 CDHR5Q9HBB8 845 aa8.16□□□□□ -1.1
LINC02390-201ENST00000541404 HPS5Q9UPZ3 1129 aa8.16□□□□□ -1.1
LINC02390-201ENST00000541404 PRSS12P56730 875 aa8.15□□□□□ -1.1
LINC02390-201ENST00000541404 OSBPP22059 807 aa8.14□□□□□ -1.11
LINC02390-201ENST00000541404 ARIH1Q9Y4X5 557 aaPredicted RBP8.14□□□□□ -1.11
LINC02390-201ENST00000541404 RNF40O75150 1001 aa8.13□□□□□ -1.11
LINC02390-201ENST00000541404 TSR3Q9UJK0 312 aaKnown RBP8.13□□□□□ -1.11
LINC02390-201ENST00000541404 PNMA3Q9UL41 463 aa8.13□□□□□ -1.11
LINC02390-201ENST00000541404 A0A0G2JS52 829 aa8.12□□□□□ -1.11
LINC02390-201ENST00000541404 PPP4CP60510 307 aa8.12□□□□□ -1.11
LINC02390-201ENST00000541404 SAMD7Q7Z3H4 446 aa8.12□□□□□ -1.11
LINC02390-201ENST00000541404 CERKQ8TCT0 537 aa8.12□□□□□ -1.11
LINC02390-201ENST00000541404 FAM198AQ9UFP1 575 aa8.12□□□□□ -1.11
LINC02390-201ENST00000541404 C3orf80F5H4A9 247 aa8.11□□□□□ -1.11
LINC02390-201ENST00000541404 IFFO2Q5TF58 517 aa8.11□□□□□ -1.11
LINC02390-201ENST00000541404 TATDN2Q93075 761 aa8.11□□□□□ -1.11
LINC02390-201ENST00000541404 NBPF26B4DH59 902 aa8.1□□□□□ -1.11
LINC02390-201ENST00000541404 NYAP1Q6ZVC0 841 aa8.1□□□□□ -1.11
LINC02390-201ENST00000541404 NUDT18Q6ZVK8 323 aa8.1□□□□□ -1.11
LINC02390-201ENST00000541404 ITGBL1O95965 494 aaPredicted RBP8.08□□□□□ -1.12
LINC02390-201ENST00000541404 MLLT3P42568 568 aaPredicted RBP8.08□□□□□ -1.12
LINC02390-201ENST00000541404 KCNC4Q03721 635 aa8.08□□□□□ -1.12
LINC02390-201ENST00000541404 KCNV2Q8TDN2 545 aa8.08□□□□□ -1.12
LINC02390-201ENST00000541404 HDGFP51858 240 aaKnown RBP8.07□□□□□ -1.12
LINC02390-201ENST00000541404 PADI6Q6TGC4 694 aa8.07□□□□□ -1.12
LINC02390-201ENST00000541404 ERCC6Q03468 1493 aa8.06□□□□□ -1.12
LINC02390-201ENST00000541404 ARHGEF1Q92888 912 aaKnown RBP8.06□□□□□ -1.12
LINC02390-201ENST00000541404 CUX2O14529 1486 aa8.05□□□□□ -1.12
LINC02390-201ENST00000541404 IRX2Q9BZI1 471 aaPredicted RBP8.04□□□□□ -1.12
LINC02390-201ENST00000541404 NPDC1Q9NQX5 325 aaPredicted RBP8.04□□□□□ -1.12
LINC02390-201ENST00000541404 RGS20O76081 388 aa8.03□□□□□ -1.12
LINC02390-201ENST00000541404 RBM27Q9P2N5 1060 aaKnown RBP8.02□□□□□ -1.13
LINC02390-201ENST00000541404 NUTM2FA1L443 756 aa8.01□□□□□ -1.13
LINC02390-201ENST00000541404 SWT1Q5T5J6 900 aaKnown RBP8.01□□□□□ -1.13
LINC02390-201ENST00000541404 MTRQ99707 1265 aa8□□□□□ -1.13
LINC02390-201ENST00000541404 RSF1Q96T23 1441 aaPredicted RBP8□□□□□ -1.13
LINC02390-201ENST00000541404 NCAPD3P42695 1498 aa8□□□□□ -1.13
LINC02390-201ENST00000541404 BAZ1AQ9NRL2 1556 aaPredicted RBP7.98□□□□□ -1.13
LINC02390-201ENST00000541404 SEMA3EO15041 775 aa7.98□□□□□ -1.13
LINC02390-201ENST00000541404 TJAP1Q5JTD0 557 aa7.98□□□□□ -1.13
LINC02390-201ENST00000541404 P3H3Q8IVL6 736 aa7.98□□□□□ -1.13
LINC02390-201ENST00000541404 TTC13Q8NBP0 860 aa7.98□□□□□ -1.13
LINC02390-201ENST00000541404 SLC4A3P48751 1232 aa7.97□□□□□ -1.13
LINC02390-201ENST00000541404 APLP1P51693 650 aa7.97□□□□□ -1.13
LINC02390-201ENST00000541404 COPS2P61201 443 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms