RNA–Protein interactions for RNA: ENST00000539832.1

AC078878.1-201, humanhuman

BASIC

Gene AC078878.1, Length 958 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078878.1-201ENST00000539832 TSR1Q2NL82 804 aaKnown RBP13.24□□□□□ -0.29
AC078878.1-201ENST00000539832 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
AC078878.1-201ENST00000539832 OTUD5Q96G74 571 aa13.24□□□□□ -0.29
AC078878.1-201ENST00000539832 ZNF454Q8N9F8 522 aa13.23□□□□□ -0.29
AC078878.1-201ENST00000539832 ZDHHC16Q969W1 377 aa13.23□□□□□ -0.29
AC078878.1-201ENST00000539832 PDE4DQ08499 809 aa13.21□□□□□ -0.29
AC078878.1-201ENST00000539832 C6orf132Q5T0Z8 1188 aa13.19□□□□□ -0.3
AC078878.1-201ENST00000539832 LHX6Q9UPM6 363 aa13.19□□□□□ -0.3
AC078878.1-201ENST00000539832 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
AC078878.1-201ENST00000539832 AMHR2Q16671 573 aa13.18□□□□□ -0.3
AC078878.1-201ENST00000539832 ADAM33Q9BZ11 813 aa13.18□□□□□ -0.3
AC078878.1-201ENST00000539832 GPBP1L1Q9HC44 474 aaPredicted RBP13.18□□□□□ -0.3
AC078878.1-201ENST00000539832 PSDA5PKW4 1024 aaPredicted RBP13.16□□□□□ -0.3
AC078878.1-201ENST00000539832 CERKQ8TCT0 537 aa13.16□□□□□ -0.3
AC078878.1-201ENST00000539832 NISCHQ9Y2I1 1504 aa13.16□□□□□ -0.3
AC078878.1-201ENST00000539832 KDM4CQ9H3R0 1056 aa13.15□□□□□ -0.3
AC078878.1-201ENST00000539832 PPP4R3BQ5MIZ7 849 aa13.13□□□□□ -0.31
AC078878.1-201ENST00000539832 LHX8Q68G74 356 aa13.13□□□□□ -0.31
AC078878.1-201ENST00000539832 TTC13Q8NBP0 860 aa13.11□□□□□ -0.31
AC078878.1-201ENST00000539832 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
AC078878.1-201ENST00000539832 RBM27Q9P2N5 1060 aaKnown RBP13.11□□□□□ -0.31
AC078878.1-201ENST00000539832 PARP9Q8IXQ6 854 aa13.1□□□□□ -0.31
AC078878.1-201ENST00000539832 PADI6Q6TGC4 694 aa13.07□□□□□ -0.32
AC078878.1-201ENST00000539832 PRSS12P56730 875 aa13.06□□□□□ -0.32
AC078878.1-201ENST00000539832 DAXXQ9UER7 740 aaPredicted RBP13.06□□□□□ -0.32
AC078878.1-201ENST00000539832 GTF3C3Q9Y5Q9 886 aa13.05□□□□□ -0.32
AC078878.1-201ENST00000539832 COL9A1P20849 921 aa13.04□□□□□ -0.32
AC078878.1-201ENST00000539832 PHOX2BQ99453 314 aa13.04□□□□□ -0.32
AC078878.1-201ENST00000539832 ADGRG1Q9Y653 693 aa13.04□□□□□ -0.32
AC078878.1-201ENST00000539832 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
AC078878.1-201ENST00000539832 TMUB1Q9BVT8 246 aa13.03□□□□□ -0.32
AC078878.1-201ENST00000539832 PPP1R3GB7ZBB8 358 aa13.02□□□□□ -0.33
AC078878.1-201ENST00000539832 OATP04181 439 aa13.02□□□□□ -0.33
AC078878.1-201ENST00000539832 PTPREP23469 700 aa13.02□□□□□ -0.33
AC078878.1-201ENST00000539832 TTLL12Q14166 644 aaPredicted RBP13.02□□□□□ -0.33
AC078878.1-201ENST00000539832 METTL3Q86U44 580 aaKnown RBP13.02□□□□□ -0.33
AC078878.1-201ENST00000539832 FAM161AQ3B820 660 aa13.01□□□□□ -0.33
AC078878.1-201ENST00000539832 IL27Q8NEV9 243 aa13.01□□□□□ -0.33
AC078878.1-201ENST00000539832 FAM117AQ9C073 453 aa13.01□□□□□ -0.33
AC078878.1-201ENST00000539832 PXYLP1Q8TE99 480 aa13□□□□□ -0.33
AC078878.1-201ENST00000539832 REPIN1Q9BWE0 567 aaKnown RBP13□□□□□ -0.33
AC078878.1-201ENST00000539832 GIGYF2Q6Y7W6 1299 aaKnown RBP12.99□□□□□ -0.33
AC078878.1-201ENST00000539832 FAM198AQ9UFP1 575 aa12.99□□□□□ -0.33
AC078878.1-201ENST00000539832 CLCN1P35523 988 aa12.98□□□□□ -0.33
AC078878.1-201ENST00000539832 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
AC078878.1-201ENST00000539832 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.33
AC078878.1-201ENST00000539832 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
AC078878.1-201ENST00000539832 ST18O60284 1047 aa12.95□□□□□ -0.34
AC078878.1-201ENST00000539832 MDM2Q00987 491 aaPredicted RBP12.95□□□□□ -0.34
AC078878.1-201ENST00000539832 TSKSQ9UJT2 592 aa12.95□□□□□ -0.34
AC078878.1-201ENST00000539832 MS4A1P11836 297 aa12.94□□□□□ -0.34
AC078878.1-201ENST00000539832 KCNK17Q96T54 332 aa12.94□□□□□ -0.34
AC078878.1-201ENST00000539832 RBM46Q8TBY0 533 aaKnown RBP12.93□□□□□ -0.34
AC078878.1-201ENST00000539832 TRIM6-TRIM34B2RNG4 842 aa12.92□□□□□ -0.34
AC078878.1-201ENST00000539832 EYA1Q99502 592 aa12.92□□□□□ -0.34
AC078878.1-201ENST00000539832 ERBB3P21860 1342 aa12.91□□□□□ -0.34
AC078878.1-201ENST00000539832 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
AC078878.1-201ENST00000539832 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
AC078878.1-201ENST00000539832 NLRP7Q8WX94 980 aa12.9□□□□□ -0.34
AC078878.1-201ENST00000539832 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
AC078878.1-201ENST00000539832 KCNH8Q96L42 1107 aa12.89□□□□□ -0.35
AC078878.1-201ENST00000539832 FAM217BQ9NTX9 383 aaPredicted RBP12.89□□□□□ -0.35
AC078878.1-201ENST00000539832 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.87□□□□□ -0.35
AC078878.1-201ENST00000539832 NBPF26B4DH59 902 aa12.87□□□□□ -0.35
AC078878.1-201ENST00000539832 SSTR3P32745 418 aaPredicted RBP12.87□□□□□ -0.35
AC078878.1-201ENST00000539832 EMP3P54852 163 aa12.87□□□□□ -0.35
AC078878.1-201ENST00000539832 PROX2Q3B8N5 592 aa12.87□□□□□ -0.35
AC078878.1-201ENST00000539832 POTEEQ6S8J3 1075 aa12.87□□□□□ -0.35
AC078878.1-201ENST00000539832 PACS2Q86VP3 889 aa12.87□□□□□ -0.35
AC078878.1-201ENST00000539832 ZBED2Q9BTP6 218 aa12.87□□□□□ -0.35
AC078878.1-201ENST00000539832 ARHGAP33O14559 1287 aa12.86□□□□□ -0.35
AC078878.1-201ENST00000539832 NUDT18Q6ZVK8 323 aa12.86□□□□□ -0.35
AC078878.1-201ENST00000539832 TATDN2Q93075 761 aa12.86□□□□□ -0.35
AC078878.1-201ENST00000539832 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
AC078878.1-201ENST00000539832 PSEN2P49810 448 aa12.85□□□□□ -0.35
AC078878.1-201ENST00000539832 MARVELD3Q96A59 401 aa12.85□□□□□ -0.35
AC078878.1-201ENST00000539832 GOPCQ9HD26 462 aa12.85□□□□□ -0.35
AC078878.1-201ENST00000539832 PBX2P40425 430 aa12.83□□□□□ -0.36
AC078878.1-201ENST00000539832 SLC4A5Q9BY07 1137 aa12.83□□□□□ -0.36
AC078878.1-201ENST00000539832 PNMA3Q9UL41 463 aa12.82□□□□□ -0.36
AC078878.1-201ENST00000539832 TIMELESSQ9UNS1 1208 aa12.82□□□□□ -0.36
AC078878.1-201ENST00000539832 ZNF687Q8N1G0 1237 aa12.81□□□□□ -0.36
AC078878.1-201ENST00000539832 DNAJB2P25686 324 aa12.8□□□□□ -0.36
AC078878.1-201ENST00000539832 ERICH6Q7L0X2 663 aa12.8□□□□□ -0.36
AC078878.1-201ENST00000539832 BEGAINQ9BUH8 593 aa12.8□□□□□ -0.36
AC078878.1-201ENST00000539832 KIAA1468Q9P260 1216 aa12.8□□□□□ -0.36
AC078878.1-201ENST00000539832 DMRTA1Q5VZB9 504 aa12.79□□□□□ -0.36
AC078878.1-201ENST00000539832 TMEM134Q9H6X4 195 aa12.79□□□□□ -0.36
AC078878.1-201ENST00000539832 AXIN2Q9Y2T1 843 aa12.79□□□□□ -0.36
AC078878.1-201ENST00000539832 FAM205CA6NFA0 338 aa12.78□□□□□ -0.36
AC078878.1-201ENST00000539832 FAM163AQ96GL9 167 aaPredicted RBP12.78□□□□□ -0.36
AC078878.1-201ENST00000539832 RABGEF1Q9UJ41 708 aa12.78□□□□□ -0.36
AC078878.1-201ENST00000539832 SMAPO00193 183 aa12.77□□□□□ -0.37
AC078878.1-201ENST00000539832 LCE2DQ5TA82 110 aaPredicted RBP12.77□□□□□ -0.37
AC078878.1-201ENST00000539832 POTEB3A0JP26 581 aa12.76□□□□□ -0.37
AC078878.1-201ENST00000539832 SH3D19Q5HYK7 790 aa12.76□□□□□ -0.37
AC078878.1-201ENST00000539832 POTEBQ6S5H4 581 aa12.76□□□□□ -0.37
AC078878.1-201ENST00000539832 HS3ST6Q96QI5 342 aa12.74□□□□□ -0.37
AC078878.1-201ENST00000539832 RSPH6AQ9H0K4 717 aa12.74□□□□□ -0.37
AC078878.1-201ENST00000539832 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms