RNA–Protein interactions for RNA: ENST00000539521.1

HPRT1P3-201, Transcript of hypoxanthine phosphoribosyltransferase 1 pseudogene 3, humanhuman

BASIC

Gene HPRT1P3, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPRT1P3-201ENST00000539521 EMILIN3Q9NT22 766 aa9.27□□□□□ -0.93
HPRT1P3-201ENST00000539521 A0A0G2JS52 829 aa9.25□□□□□ -0.93
HPRT1P3-201ENST00000539521 NYAP1Q6ZVC0 841 aa9.25□□□□□ -0.93
HPRT1P3-201ENST00000539521 IRX2Q9BZI1 471 aaPredicted RBP9.25□□□□□ -0.93
HPRT1P3-201ENST00000539521 ONECUT3O60422 494 aaPredicted RBP9.23□□□□□ -0.93
HPRT1P3-201ENST00000539521 PROX2Q3B8N5 592 aa9.23□□□□□ -0.93
HPRT1P3-201ENST00000539521 KIAA1468Q9P260 1216 aa9.21□□□□□ -0.94
HPRT1P3-201ENST00000539521 SOWAHBA6NEL2 793 aa9.2□□□□□ -0.94
HPRT1P3-201ENST00000539521 COL9A1P20849 921 aa9.2□□□□□ -0.94
HPRT1P3-201ENST00000539521 C6orf132Q5T0Z8 1188 aa9.2□□□□□ -0.94
HPRT1P3-201ENST00000539521 ZFRQ96KR1 1074 aaKnown RBP9.2□□□□□ -0.94
HPRT1P3-201ENST00000539521 DPYSL4O14531 572 aa9.18□□□□□ -0.94
HPRT1P3-201ENST00000539521 BCAMP50895 628 aa9.18□□□□□ -0.94
HPRT1P3-201ENST00000539521 ITGBL1O95965 494 aaPredicted RBP9.17□□□□□ -0.94
HPRT1P3-201ENST00000539521 CAMK2BQ13554 666 aa9.17□□□□□ -0.94
HPRT1P3-201ENST00000539521 CADPS2Q86UW7 1296 aa9.17□□□□□ -0.94
HPRT1P3-201ENST00000539521 RBM33Q96EV2 1170 aaKnown RBP9.17□□□□□ -0.94
HPRT1P3-201ENST00000539521 KCNC4Q03721 635 aa9.16□□□□□ -0.94
HPRT1P3-201ENST00000539521 FAM98CQ17RN3 349 aaKnown RBP9.16□□□□□ -0.94
HPRT1P3-201ENST00000539521 PACS2Q86VP3 889 aa9.16□□□□□ -0.94
HPRT1P3-201ENST00000539521 LRCH3Q96II8 777 aa9.16□□□□□ -0.94
HPRT1P3-201ENST00000539521 TRIM6-TRIM34B2RNG4 842 aa9.15□□□□□ -0.94
HPRT1P3-201ENST00000539521 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.15□□□□□ -0.94
HPRT1P3-201ENST00000539521 SEPT9Q9UHD8 586 aaPredicted RBP9.15□□□□□ -0.94
HPRT1P3-201ENST00000539521 DDX12PQ92771 950 aa9.14□□□□□ -0.95
HPRT1P3-201ENST00000539521 MAP3K7O43318 606 aa9.13□□□□□ -0.95
HPRT1P3-201ENST00000539521 BBXQ8WY36 941 aaPredicted RBP9.13□□□□□ -0.95
HPRT1P3-201ENST00000539521 TSR3Q9UJK0 312 aaKnown RBP9.13□□□□□ -0.95
HPRT1P3-201ENST00000539521 WBP1LQ9NX94 342 aa9.12□□□□□ -0.95
HPRT1P3-201ENST00000539521 SPDYE16A6NNV3 312 aaPredicted RBP9.11□□□□□ -0.95
HPRT1P3-201ENST00000539521 NBR1Q14596 966 aa9.11□□□□□ -0.95
HPRT1P3-201ENST00000539521 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.11□□□□□ -0.95
HPRT1P3-201ENST00000539521 HPS5Q9UPZ3 1129 aa9.11□□□□□ -0.95
HPRT1P3-201ENST00000539521 HDGFP51858 240 aaKnown RBP9.09□□□□□ -0.95
HPRT1P3-201ENST00000539521 PPP4CP60510 307 aa9.09□□□□□ -0.95
HPRT1P3-201ENST00000539521 WDR70Q9NW82 654 aa9.09□□□□□ -0.95
HPRT1P3-201ENST00000539521 EN1Q05925 392 aaPredicted RBP9.08□□□□□ -0.96
HPRT1P3-201ENST00000539521 SPRYD3Q8NCJ5 442 aa9.08□□□□□ -0.96
HPRT1P3-201ENST00000539521 CERKQ8TCT0 537 aa9.08□□□□□ -0.96
HPRT1P3-201ENST00000539521 PDIA6Q15084 440 aa9.06□□□□□ -0.96
HPRT1P3-201ENST00000539521 Q6ZNB5 142 aa9.06□□□□□ -0.96
HPRT1P3-201ENST00000539521 LAPTM4AQ15012 233 aa9.04□□□□□ -0.96
HPRT1P3-201ENST00000539521 NBPF26B4DH59 902 aa9.03□□□□□ -0.96
HPRT1P3-201ENST00000539521 E2F4Q16254 413 aa9.03□□□□□ -0.96
HPRT1P3-201ENST00000539521 PRSS12P56730 875 aa9.02□□□□□ -0.97
HPRT1P3-201ENST00000539521 TSR1Q2NL82 804 aaKnown RBP9.02□□□□□ -0.97
HPRT1P3-201ENST00000539521 NECTIN2Q92692 538 aa9.02□□□□□ -0.97
HPRT1P3-201ENST00000539521 CDCA7LQ96GN5 454 aa9.02□□□□□ -0.97
HPRT1P3-201ENST00000539521 TSKSQ9UJT2 592 aa9.02□□□□□ -0.97
HPRT1P3-201ENST00000539521 GRXCR2A6NFK2 248 aa9□□□□□ -0.97
HPRT1P3-201ENST00000539521 SLC4A3P48751 1232 aa9□□□□□ -0.97
HPRT1P3-201ENST00000539521 SAMD7Q7Z3H4 446 aa8.99□□□□□ -0.97
HPRT1P3-201ENST00000539521 PNMA3Q9UL41 463 aa8.99□□□□□ -0.97
HPRT1P3-201ENST00000539521 RNF40O75150 1001 aa8.98□□□□□ -0.97
HPRT1P3-201ENST00000539521 TATDN2Q93075 761 aa8.97□□□□□ -0.97
HPRT1P3-201ENST00000539521 IL21Q9HBE4 155 aa8.97□□□□□ -0.97
HPRT1P3-201ENST00000539521 SMAPO00193 183 aa8.96□□□□□ -0.98
HPRT1P3-201ENST00000539521 CFAP44Q96MT7 982 aa8.95□□□□□ -0.98
HPRT1P3-201ENST00000539521 GFRA3O60609 400 aa8.94□□□□□ -0.98
HPRT1P3-201ENST00000539521 RBM27Q9P2N5 1060 aaKnown RBP8.94□□□□□ -0.98
HPRT1P3-201ENST00000539521 ARIH1Q9Y4X5 557 aaPredicted RBP8.94□□□□□ -0.98
HPRT1P3-201ENST00000539521 GGCXP38435 758 aa8.93□□□□□ -0.98
HPRT1P3-201ENST00000539521 MTRQ99707 1265 aa8.93□□□□□ -0.98
HPRT1P3-201ENST00000539521 TJAP1Q5JTD0 557 aa8.92□□□□□ -0.98
HPRT1P3-201ENST00000539521 NUDT18Q6ZVK8 323 aa8.92□□□□□ -0.98
HPRT1P3-201ENST00000539521 PAXIP1Q6ZW49 1069 aaPredicted RBP8.92□□□□□ -0.98
HPRT1P3-201ENST00000539521 SLF2Q8IX21 1173 aa8.91□□□□□ -0.98
HPRT1P3-201ENST00000539521 PRKD2Q9BZL6 878 aa8.91□□□□□ -0.98
HPRT1P3-201ENST00000539521 PPP1R18Q6NYC8 613 aa8.89□□□□□ -0.99
HPRT1P3-201ENST00000539521 PRR14Q9BWN1 585 aa8.89□□□□□ -0.99
HPRT1P3-201ENST00000539521 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.89□□□□□ -0.99
HPRT1P3-201ENST00000539521 V9GY48 417 aaPredicted RBP8.89□□□□□ -0.99
HPRT1P3-201ENST00000539521 OSBPP22059 807 aa8.88□□□□□ -0.99
HPRT1P3-201ENST00000539521 AMER1Q5JTC6 1135 aaPredicted RBP8.88□□□□□ -0.99
HPRT1P3-201ENST00000539521 TRAF7Q6Q0C0 670 aa8.88□□□□□ -0.99
HPRT1P3-201ENST00000539521 FAM198AQ9UFP1 575 aa8.88□□□□□ -0.99
HPRT1P3-201ENST00000539521 NRG2O14511 850 aaPredicted RBP8.86□□□□□ -0.99
HPRT1P3-201ENST00000539521 CDHR5Q9HBB8 845 aa8.85□□□□□ -0.99
HPRT1P3-201ENST00000539521 APLP1P51693 650 aa8.84□□□□□ -0.99
HPRT1P3-201ENST00000539521 PRIM1P49642 420 aaKnown RBP8.83□□□□□ -1
HPRT1P3-201ENST00000539521 SWT1Q5T5J6 900 aaKnown RBP8.83□□□□□ -1
HPRT1P3-201ENST00000539521 ZNF516Q92618 1163 aa8.83□□□□□ -1
HPRT1P3-201ENST00000539521 COPS2P61201 443 aa8.82□□□□□ -1
HPRT1P3-201ENST00000539521 PADI6Q6TGC4 694 aa8.82□□□□□ -1
HPRT1P3-201ENST00000539521 TMUB1Q9BVT8 246 aa8.82□□□□□ -1
HPRT1P3-201ENST00000539521 C3orf80F5H4A9 247 aa8.81□□□□□ -1
HPRT1P3-201ENST00000539521 PDZRN3Q9UPQ7 1066 aa8.8□□□□□ -1
HPRT1P3-201ENST00000539521 PCDHB3Q9Y5E6 796 aa8.8□□□□□ -1
HPRT1P3-201ENST00000539521 ZPR1O75312 459 aa8.78□□□□□ -1
HPRT1P3-201ENST00000539521 TTC13Q8NBP0 860 aa8.78□□□□□ -1
HPRT1P3-201ENST00000539521 NKX2-3Q8TAU0 364 aa8.77□□□□□ -1.01
HPRT1P3-201ENST00000539521 RBM46Q8TBY0 533 aaKnown RBP8.77□□□□□ -1.01
HPRT1P3-201ENST00000539521 DNAJB2P25686 324 aa8.76□□□□□ -1.01
HPRT1P3-201ENST00000539521 KMT5BQ4FZB7 885 aa8.76□□□□□ -1.01
HPRT1P3-201ENST00000539521 ARHGEF1Q92888 912 aaKnown RBP8.76□□□□□ -1.01
HPRT1P3-201ENST00000539521 NPDC1Q9NQX5 325 aaPredicted RBP8.76□□□□□ -1.01
HPRT1P3-201ENST00000539521 EYA1Q99502 592 aa8.74□□□□□ -1.01
HPRT1P3-201ENST00000539521 ZNF787Q6DD87 383 aa8.73□□□□□ -1.01
HPRT1P3-201ENST00000539521 NUTM2FA1L443 756 aa8.71□□□□□ -1.02
HPRT1P3-201ENST00000539521 SLC19A1P41440 591 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms