RNA–Protein interactions for RNA: ENST00000538260.5

ARMC8-223, Transcript of armadillo repeat containing 8, human

TSL 2 BASIC

Gene ARMC8, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARMC8-223	ENST00000538260	ZBED9	Q6R2W3	1325 aa		13.38	□□□□□ -0.27
ARMC8-223	ENST00000538260	RUSC2	Q8N2Y8	1516 aa		13.38	□□□□□ -0.27
ARMC8-223	ENST00000538260	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.38	□□□□□ -0.27
ARMC8-223	ENST00000538260	RSPH6A	Q9H0K4	717 aa		13.38	□□□□□ -0.27
ARMC8-223	ENST00000538260	FANCI	Q9NVI1	1328 aa		13.38	□□□□□ -0.27
ARMC8-223	ENST00000538260	ST20-MTHFS	A0A0A6YYL1	179 aa		13.37	□□□□□ -0.27
ARMC8-223	ENST00000538260	DDX49	Q9Y6V7	483 aa	Known RBP	13.37	□□□□□ -0.27
ARMC8-223	ENST00000538260	ERCC6	Q03468	1493 aa		13.37	□□□□□ -0.27
ARMC8-223	ENST00000538260	CGNL1	Q0VF96	1302 aa		13.37	□□□□□ -0.27
ARMC8-223	ENST00000538260	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.37	□□□□□ -0.27
ARMC8-223	ENST00000538260	PAK3	O75914	559 aa	Predicted RBP	13.36	□□□□□ -0.27
ARMC8-223	ENST00000538260	KIF3B	O15066	747 aa		13.36	□□□□□ -0.27
ARMC8-223	ENST00000538260	RRP1	P56182	461 aa	Known RBP	13.36	□□□□□ -0.27
ARMC8-223	ENST00000538260	KIF16B	Q96L93	1317 aa		13.36	□□□□□ -0.27
ARMC8-223	ENST00000538260	DHX57	Q6P158	1386 aa	Known RBP	13.36	□□□□□ -0.27
ARMC8-223	ENST00000538260	EXOC6	Q8TAG9	804 aa		13.35	□□□□□ -0.27
ARMC8-223	ENST00000538260	NOL8	Q76FK4	1167 aa	Known RBP	13.35	□□□□□ -0.27
ARMC8-223	ENST00000538260	CLSTN1	O94985	981 aa		13.35	□□□□□ -0.27
ARMC8-223	ENST00000538260	HSP90B1	P14625	803 aa	Known RBP	13.35	□□□□□ -0.27
ARMC8-223	ENST00000538260		E9PSI1	815 aa		13.34	□□□□□ -0.27
ARMC8-223	ENST00000538260	GOLGA6L1	Q8N7Z2	621 aa		13.34	□□□□□ -0.27
ARMC8-223	ENST00000538260	SLC4A3	P48751	1232 aa		13.34	□□□□□ -0.27
ARMC8-223	ENST00000538260	PANK3	Q9H999	370 aa		13.34	□□□□□ -0.27
ARMC8-223	ENST00000538260	CSB-PGBD3	P0DP91	1061 aa		13.34	□□□□□ -0.27
ARMC8-223	ENST00000538260	ATP6V1D	Q9Y5K8	247 aa		13.34	□□□□□ -0.27
ARMC8-223	ENST00000538260	NOC3L	Q8WTT2	800 aa	Known RBP	13.33	□□□□□ -0.28
ARMC8-223	ENST00000538260	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.33	□□□□□ -0.28
ARMC8-223	ENST00000538260	ZKSCAN2	Q63HK3	967 aa		13.33	□□□□□ -0.28
ARMC8-223	ENST00000538260	SF3A1	Q15459	793 aa	Known RBP	13.33	□□□□□ -0.28
ARMC8-223	ENST00000538260	PLIN1	O60240	522 aa		13.32	□□□□□ -0.28
ARMC8-223	ENST00000538260	TAF7L	Q5H9L4	462 aa		13.32	□□□□□ -0.28
ARMC8-223	ENST00000538260	NGEF	Q8N5V2	710 aa		13.32	□□□□□ -0.28
ARMC8-223	ENST00000538260	CHMP3	Q9Y3E7	222 aa		13.31	□□□□□ -0.28
ARMC8-223	ENST00000538260	TDRD9	Q8NDG6	1382 aa	Known RBP	13.31	□□□□□ -0.28
ARMC8-223	ENST00000538260	ANKRD45	Q5TZF3	282 aa		13.31	□□□□□ -0.28
ARMC8-223	ENST00000538260	CRBN	Q96SW2	442 aa		13.31	□□□□□ -0.28
ARMC8-223	ENST00000538260	RRP7A	Q9Y3A4	280 aa	Known RBP	13.31	□□□□□ -0.28
ARMC8-223	ENST00000538260	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
ARMC8-223	ENST00000538260	BCL2L13	Q9BXK5	485 aa		13.31	□□□□□ -0.28
ARMC8-223	ENST00000538260	TPM3	P06753	285 aa		13.3	□□□□□ -0.28
ARMC8-223	ENST00000538260	CHMP4C	Q96CF2	233 aa		13.3	□□□□□ -0.28
ARMC8-223	ENST00000538260	COG6	Q9Y2V7	657 aa		13.3	□□□□□ -0.28
ARMC8-223	ENST00000538260	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.3	□□□□□ -0.28
ARMC8-223	ENST00000538260	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.3	□□□□□ -0.28
ARMC8-223	ENST00000538260	RASSF8	Q8NHQ8	419 aa		13.28	□□□□□ -0.28
ARMC8-223	ENST00000538260	TRAK1	Q9UPV9	953 aa		13.28	□□□□□ -0.28
ARMC8-223	ENST00000538260	AMPH	P49418	695 aa		13.28	□□□□□ -0.28
ARMC8-223	ENST00000538260	ELL2	O00472	640 aa	Predicted RBP	13.28	□□□□□ -0.28
ARMC8-223	ENST00000538260	GOLGA6L19	H0YKK7	550 aa		13.27	□□□□□ -0.28
ARMC8-223	ENST00000538260	APAF1	O14727	1248 aa		13.27	□□□□□ -0.28
ARMC8-223	ENST00000538260	NGDN	Q8NEJ9	315 aa	Known RBP	13.27	□□□□□ -0.28
ARMC8-223	ENST00000538260	CHMP5	Q9NZZ3	219 aa		13.27	□□□□□ -0.28
ARMC8-223	ENST00000538260	BECN2	A8MW95	431 aa		13.27	□□□□□ -0.29
ARMC8-223	ENST00000538260	RILPL2	Q969X0	211 aa		13.27	□□□□□ -0.29
ARMC8-223	ENST00000538260	REC8	O95072	547 aa		13.26	□□□□□ -0.29
ARMC8-223	ENST00000538260	CCDC18	Q5T9S5	1454 aa		13.26	□□□□□ -0.29
ARMC8-223	ENST00000538260	FHOD3	Q2V2M9	1422 aa		13.25	□□□□□ -0.29
ARMC8-223	ENST00000538260	DDX19B	Q9UMR2	479 aa		13.25	□□□□□ -0.29
ARMC8-223	ENST00000538260		H3BQV1	296 aa		13.25	□□□□□ -0.29
ARMC8-223	ENST00000538260	IFFO2	Q5TF58	517 aa		13.25	□□□□□ -0.29
ARMC8-223	ENST00000538260	WASHC2C	Q9Y4E1	1318 aa		13.25	□□□□□ -0.29
ARMC8-223	ENST00000538260	CCDC144A	A2RUR9	1427 aa		13.25	□□□□□ -0.29
ARMC8-223	ENST00000538260	FAM184A	Q8NB25	1140 aa		13.25	□□□□□ -0.29
ARMC8-223	ENST00000538260	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
ARMC8-223	ENST00000538260	CREBRF	Q8IUR6	639 aa		13.24	□□□□□ -0.29
ARMC8-223	ENST00000538260	TOMM22	Q9NS69	142 aa		13.24	□□□□□ -0.29
ARMC8-223	ENST00000538260	USP47	Q96K76	1375 aa		13.24	□□□□□ -0.29
ARMC8-223	ENST00000538260	RAPGEF2	Q9Y4G8	1499 aa		13.24	□□□□□ -0.29
ARMC8-223	ENST00000538260	TOP2A	P11388	1531 aa	Known RBP	13.24	□□□□□ -0.29
ARMC8-223	ENST00000538260	VSIG10	Q8N0Z9	540 aa		13.24	□□□□□ -0.29
ARMC8-223	ENST00000538260		A0A0U1RQG5	324 aa	Predicted RBP	13.23	□□□□□ -0.29
ARMC8-223	ENST00000538260	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.22	□□□□□ -0.29
ARMC8-223	ENST00000538260	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.22	□□□□□ -0.29
ARMC8-223	ENST00000538260	RUFY2	Q8WXA3	655 aa		13.22	□□□□□ -0.29
ARMC8-223	ENST00000538260	PDS5B	Q9NTI5	1447 aa		13.22	□□□□□ -0.29
ARMC8-223	ENST00000538260	CPLX2	Q6PUV4	134 aa	Known RBP	13.22	□□□□□ -0.29
ARMC8-223	ENST00000538260	TSR1	Q2NL82	804 aa	Known RBP	13.21	□□□□□ -0.29
ARMC8-223	ENST00000538260	DZIP1L	Q8IYY4	767 aa	Known RBP	13.21	□□□□□ -0.29
ARMC8-223	ENST00000538260	LTV1	Q96GA3	475 aa	Predicted RBP	13.21	□□□□□ -0.29
ARMC8-223	ENST00000538260	NCBP3	Q53F19	620 aa	Known RBP	13.21	□□□□□ -0.29
ARMC8-223	ENST00000538260	ZKSCAN1	P17029	563 aa	Predicted RBP	13.21	□□□□□ -0.29
ARMC8-223	ENST00000538260	API5	Q9BZZ5	524 aa	Known RBP	13.21	□□□□□ -0.29
ARMC8-223	ENST00000538260	DIAPH3	Q9NSV4	1193 aa		13.21	□□□□□ -0.29
ARMC8-223	ENST00000538260	EID1	Q9Y6B2	187 aa		13.21	□□□□□ -0.29
ARMC8-223	ENST00000538260	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.2	□□□□□ -0.3
ARMC8-223	ENST00000538260	CEP89	Q96ST8	783 aa		13.2	□□□□□ -0.3
ARMC8-223	ENST00000538260	SMARCA2	P51531	1590 aa		13.19	□□□□□ -0.3
ARMC8-223	ENST00000538260	EVC2	Q86UK5	1308 aa		13.19	□□□□□ -0.3
ARMC8-223	ENST00000538260	VGF	O15240	615 aa	Predicted RBP	13.19	□□□□□ -0.3
ARMC8-223	ENST00000538260	NUCB2	P80303	420 aa		13.19	□□□□□ -0.3
ARMC8-223	ENST00000538260	TPM1	P09493	284 aa		13.19	□□□□□ -0.3
ARMC8-223	ENST00000538260	GPS2	Q13227	327 aa		13.19	□□□□□ -0.3
ARMC8-223	ENST00000538260	TPD52L1	Q16890	204 aa	Predicted RBP	13.19	□□□□□ -0.3
ARMC8-223	ENST00000538260	AAMP	Q13685	434 aa		13.18	□□□□□ -0.3
ARMC8-223	ENST00000538260	COG3	Q96JB2	828 aa		13.18	□□□□□ -0.3
ARMC8-223	ENST00000538260	TRH	P20396	242 aa	Predicted RBP	13.18	□□□□□ -0.3
ARMC8-223	ENST00000538260	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.18	□□□□□ -0.3
ARMC8-223	ENST00000538260	CCAR2	Q8N163	923 aa	Known RBP	13.18	□□□□□ -0.3
ARMC8-223	ENST00000538260	PES1	O00541	588 aa	Known RBP	13.18	□□□□□ -0.3
ARMC8-223	ENST00000538260	TMX4	Q9H1E5	349 aa	Predicted RBP	13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms