RNA–Protein interactions for RNA: ENST00000535889.5

MTR-205, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene MTR, Length 10,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTR-205ENST00000535889 PTPN23Q9H3S7 1636 aa13.9□□□□□ -0.18
MTR-205ENST00000535889 HTATSF1O43719 755 aaKnown RBP13.9□□□□□ -0.18
MTR-205ENST00000535889 SRPK2P78362 688 aaKnown RBP13.9□□□□□ -0.18
MTR-205ENST00000535889 TROQ12816 1431 aaPredicted RBP13.9□□□□□ -0.18
MTR-205ENST00000535889 ARHGAP5Q13017 1502 aa13.89□□□□□ -0.19
MTR-205ENST00000535889 TNNT2P45379 298 aaPredicted RBP13.89□□□□□ -0.19
MTR-205ENST00000535889 GOLGA2Q08379 1002 aa13.89□□□□□ -0.19
MTR-205ENST00000535889 SYAP1Q96A49 352 aaPredicted RBP13.89□□□□□ -0.19
MTR-205ENST00000535889 GBP4Q96PP9 640 aa13.89□□□□□ -0.19
MTR-205ENST00000535889 RTF1Q92541 710 aaKnown RBP13.89□□□□□ -0.19
MTR-205ENST00000535889 EVC2Q86UK5 1308 aa13.88□□□□□ -0.19
MTR-205ENST00000535889 PCF11O94913 1555 aaKnown RBP13.87□□□□□ -0.19
MTR-205ENST00000535889 BRD4O60885 1362 aaPredicted RBP13.87□□□□□ -0.19
MTR-205ENST00000535889 NESP48681 1621 aa13.87□□□□□ -0.19
MTR-205ENST00000535889 HIRIP3Q9BW71 556 aaPredicted RBP13.86□□□□□ -0.19
MTR-205ENST00000535889 RAD54L2Q9Y4B4 1467 aa13.86□□□□□ -0.19
MTR-205ENST00000535889 GPATCH3Q96I76 525 aa13.85□□□□□ -0.19
MTR-205ENST00000535889 E9PSI1 815 aa13.85□□□□□ -0.19
MTR-205ENST00000535889 CC2D1BQ5T0F9 858 aaKnown RBP13.85□□□□□ -0.19
MTR-205ENST00000535889 CCDC34Q96HJ3 373 aa13.85□□□□□ -0.19
MTR-205ENST00000535889 CHAF1AQ13111 956 aaPredicted RBP13.85□□□□□ -0.19
MTR-205ENST00000535889 NBR1Q14596 966 aa13.85□□□□□ -0.19
MTR-205ENST00000535889 CSPP1Q1MSJ5 1256 aa13.85□□□□□ -0.19
MTR-205ENST00000535889 EID1Q9Y6B2 187 aa13.85□□□□□ -0.19
MTR-205ENST00000535889 CENPQQ7L2Z9 268 aaPredicted RBP13.84□□□□□ -0.19
MTR-205ENST00000535889 HSP90AB1P08238 724 aaKnown RBP13.83□□□□□ -0.19
MTR-205ENST00000535889 EPRSP07814 1512 aaKnown RBP13.83□□□□□ -0.19
MTR-205ENST00000535889 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
MTR-205ENST00000535889 U2SURPO15042 1029 aaKnown RBP13.82□□□□□ -0.2
MTR-205ENST00000535889 KIAA1107Q9UPP5 1409 aa13.82□□□□□ -0.2
MTR-205ENST00000535889 PRKRIP1Q9H875 184 aaPredicted RBP13.82□□□□□ -0.2
MTR-205ENST00000535889 CENPJQ9HC77 1338 aaPredicted RBP13.82□□□□□ -0.2
MTR-205ENST00000535889 C9orf84Q5VXU9 1444 aa13.81□□□□□ -0.2
MTR-205ENST00000535889 KIF3AQ9Y496 699 aa13.81□□□□□ -0.2
MTR-205ENST00000535889 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.81□□□□□ -0.2
MTR-205ENST00000535889 PHF14O94880 888 aa13.81□□□□□ -0.2
MTR-205ENST00000535889 FRAT1Q92837 279 aaPredicted RBP13.8□□□□□ -0.2
MTR-205ENST00000535889 KIF3BO15066 747 aa13.79□□□□□ -0.2
MTR-205ENST00000535889 KIAA1211Q6ZU35 1233 aa13.79□□□□□ -0.2
MTR-205ENST00000535889 STK31Q9BXU1 1019 aa13.79□□□□□ -0.2
MTR-205ENST00000535889 CCDC7Q96M83 1385 aa13.79□□□□□ -0.2
MTR-205ENST00000535889 EIF2AK4Q9P2K8 1649 aaKnown RBP13.78□□□□□ -0.2
MTR-205ENST00000535889 PTMAP06454 111 aaKnown RBP13.78□□□□□ -0.2
MTR-205ENST00000535889 SNAPC4Q5SXM2 1469 aa13.78□□□□□ -0.2
MTR-205ENST00000535889 OS9Q13438 667 aaPredicted RBP13.78□□□□□ -0.2
MTR-205ENST00000535889 BCL11AQ9H165 835 aa13.77□□□□□ -0.21
MTR-205ENST00000535889 CT47B1P0C2W7 299 aaPredicted RBP13.77□□□□□ -0.21
MTR-205ENST00000535889 ANO8Q9HCE9 1232 aaPredicted RBP13.77□□□□□ -0.21
MTR-205ENST00000535889 KIF16BQ96L93 1317 aa13.76□□□□□ -0.21
MTR-205ENST00000535889 IPO9Q96P70 1041 aaKnown RBP13.76□□□□□ -0.21
MTR-205ENST00000535889 LRRFIP1Q32MZ4 808 aaKnown RBP13.76□□□□□ -0.21
MTR-205ENST00000535889 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
MTR-205ENST00000535889 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
MTR-205ENST00000535889 IRX6P78412 446 aaPredicted RBP13.75□□□□□ -0.21
MTR-205ENST00000535889 ATP6V1DQ9Y5K8 247 aa13.75□□□□□ -0.21
MTR-205ENST00000535889 GOLGA6L4A6NEF3 574 aa13.75□□□□□ -0.21
MTR-205ENST00000535889 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
MTR-205ENST00000535889 RBM19Q9Y4C8 960 aaKnown RBP13.74□□□□□ -0.21
MTR-205ENST00000535889 DDX11L8A8MPP1 907 aa13.74□□□□□ -0.21
MTR-205ENST00000535889 KCNJ4P48050 445 aa13.74□□□□□ -0.21
MTR-205ENST00000535889 FANCIQ9NVI1 1328 aa13.74□□□□□ -0.21
MTR-205ENST00000535889 ANKRD30BQ9BXX2 1392 aa13.74□□□□□ -0.21
MTR-205ENST00000535889 RGS3P49796 1198 aa13.73□□□□□ -0.21
MTR-205ENST00000535889 SKOR2Q2VWA4 1001 aaPredicted RBP13.73□□□□□ -0.21
MTR-205ENST00000535889 GGT6Q6P531 493 aa13.73□□□□□ -0.21
MTR-205ENST00000535889 FGD1P98174 961 aa13.73□□□□□ -0.21
MTR-205ENST00000535889 HNRNPMP52272 730 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■■■□ 26.6
MTR-205ENST00000535889 RAPGEF6Q8TEU7 1601 aa13.72□□□□□ -0.21
MTR-205ENST00000535889 RPGRIP1LQ68CZ1 1315 aa13.72□□□□□ -0.21
MTR-205ENST00000535889 IL27Q8NEV9 243 aa13.72□□□□□ -0.21
MTR-205ENST00000535889 ST18O60284 1047 aa13.72□□□□□ -0.21
MTR-205ENST00000535889 MSNP26038 577 aaKnown RBP13.71□□□□□ -0.21
MTR-205ENST00000535889 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
MTR-205ENST00000535889 DDX19BQ9UMR2 479 aa13.71□□□□□ -0.22
MTR-205ENST00000535889 NEUROD2Q15784 382 aa13.71□□□□□ -0.22
MTR-205ENST00000535889 ST20-MTHFSA0A0A6YYL1 179 aa13.7□□□□□ -0.22
MTR-205ENST00000535889 FAM135AQ9P2D6 1515 aa13.7□□□□□ -0.22
MTR-205ENST00000535889 B4GALNT3Q6L9W6 998 aa13.7□□□□□ -0.22
MTR-205ENST00000535889 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
MTR-205ENST00000535889 PRG4Q92954 1404 aaPredicted RBP13.69□□□□□ -0.22
MTR-205ENST00000535889 SMC4Q9NTJ3 1288 aa13.69□□□□□ -0.22
MTR-205ENST00000535889 ZNF428Q96B54 188 aa13.69□□□□□ -0.22
MTR-205ENST00000535889 LAS1LQ9Y4W2 734 aaKnown RBP13.69□□□□□ -0.22
MTR-205ENST00000535889 CAMSAP2Q08AD1 1489 aa13.69□□□□□ -0.22
MTR-205ENST00000535889 ADGBQ8N7X0 1667 aa13.68□□□□□ -0.22
MTR-205ENST00000535889 FAM161AQ3B820 660 aa13.68□□□□□ -0.22
MTR-205ENST00000535889 ITPRIPQ8IWB1 547 aa13.68□□□□□ -0.22
MTR-205ENST00000535889 PBRM1Q86U86 1689 aa13.68□□□□□ -0.22
MTR-205ENST00000535889 ZKSCAN2Q63HK3 967 aa13.67□□□□□ -0.22
MTR-205ENST00000535889 REC8O95072 547 aa13.67□□□□□ -0.22
MTR-205ENST00000535889 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
MTR-205ENST00000535889 TPM4P67936 248 aa13.66□□□□□ -0.22
MTR-205ENST00000535889 KIAA2012Q0VF49 1180 aa13.65□□□□□ -0.22
MTR-205ENST00000535889 DNTTIP2Q5QJE6 756 aaKnown RBP13.65□□□□□ -0.22
MTR-205ENST00000535889 SLC52A1Q9NWF4 448 aa13.65□□□□□ -0.23
MTR-205ENST00000535889 SHANK2Q9UPX8 1470 aa13.64□□□□□ -0.23
MTR-205ENST00000535889 NAIPQ13075 1403 aa13.64□□□□□ -0.23
MTR-205ENST00000535889 PDIA4P13667 645 aaKnown RBP13.64□□□□□ -0.23
MTR-205ENST00000535889 COG3Q96JB2 828 aa13.64□□□□□ -0.23
MTR-205ENST00000535889 ARHGEF12Q9NZN5 1544 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms