RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 BANK1Q8NDB2 785 aa6.87□□□□□ -1.31
C11orf54-213ENST00000533585 SNRKQ9NRH2 765 aa6.87□□□□□ -1.31
C11orf54-213ENST00000533585 CCDC125Q86Z20 511 aa6.86□□□□□ -1.31
C11orf54-213ENST00000533585 GLMNQ92990 594 aa6.86□□□□□ -1.31
C11orf54-213ENST00000533585 EMILIN3Q9NT22 766 aa6.86□□□□□ -1.31
C11orf54-213ENST00000533585 POLR3EQ9NVU0 708 aa6.86□□□□□ -1.31
C11orf54-213ENST00000533585 CANXP27824 592 aaKnown RBP6.85□□□□□ -1.31
C11orf54-213ENST00000533585 REPIN1Q9BWE0 567 aaKnown RBP6.85□□□□□ -1.31
C11orf54-213ENST00000533585 GDPD2Q9HCC8 539 aa6.85□□□□□ -1.31
C11orf54-213ENST00000533585 CLCN1P35523 988 aa6.84□□□□□ -1.31
C11orf54-213ENST00000533585 IGSF5Q9NSI5 407 aa6.84□□□□□ -1.31
C11orf54-213ENST00000533585 RBM47A0AV96 593 aaKnown RBP6.83□□□□□ -1.32
C11orf54-213ENST00000533585 TBC1D12O60347 775 aa6.83□□□□□ -1.32
C11orf54-213ENST00000533585 RFX1P22670 979 aa6.83□□□□□ -1.32
C11orf54-213ENST00000533585 MS4A4AQ96JQ5 239 aa6.83□□□□□ -1.32
C11orf54-213ENST00000533585 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.82□□□□□ -1.32
C11orf54-213ENST00000533585 PRM3Q9NNZ6 103 aa6.82□□□□□ -1.32
C11orf54-213ENST00000533585 POM121CA8CG34 1229 aa6.81□□□□□ -1.32
C11orf54-213ENST00000533585 RFC5P40937 340 aa6.81□□□□□ -1.32
C11orf54-213ENST00000533585 ABL2P42684 1182 aa6.81□□□□□ -1.32
C11orf54-213ENST00000533585 TMEM259Q4ZIN3 620 aa6.81□□□□□ -1.32
C11orf54-213ENST00000533585 BEGAINQ9BUH8 593 aa6.81□□□□□ -1.32
C11orf54-213ENST00000533585 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.81□□□□□ -1.32
C11orf54-213ENST00000533585 VRTNQ9H8Y1 702 aa6.81□□□□□ -1.32
C11orf54-213ENST00000533585 GPHNQ9NQX3 736 aaPredicted RBP6.81□□□□□ -1.32
C11orf54-213ENST00000533585 CARNS1A5YM72 827 aa6.8□□□□□ -1.32
C11orf54-213ENST00000533585 SSTR3P32745 418 aaPredicted RBP6.8□□□□□ -1.32
C11orf54-213ENST00000533585 GPCPD1Q9NPB8 672 aa6.8□□□□□ -1.32
C11orf54-213ENST00000533585 OSBPP22059 807 aa6.79□□□□□ -1.32
C11orf54-213ENST00000533585 MRRFQ96E11 262 aaKnown RBP6.79□□□□□ -1.32
C11orf54-213ENST00000533585 TMUB1Q9BVT8 246 aa6.79□□□□□ -1.32
C11orf54-213ENST00000533585 MDM2Q00987 491 aaPredicted RBP6.78□□□□□ -1.32
C11orf54-213ENST00000533585 BRD2P25440 801 aaKnown RBP6.77□□□□□ -1.33
C11orf54-213ENST00000533585 CLK2P49760 499 aaKnown RBP6.77□□□□□ -1.33
C11orf54-213ENST00000533585 MYSM1Q5VVJ2 828 aa6.77□□□□□ -1.33
C11orf54-213ENST00000533585 IFNL1Q8IU54 200 aa6.77□□□□□ -1.33
C11orf54-213ENST00000533585 DRC1Q96MC2 740 aa6.77□□□□□ -1.33
C11orf54-213ENST00000533585 DHX37Q8IY37 1157 aaKnown RBP6.76□□□□□ -1.33
C11orf54-213ENST00000533585 MTMR14Q8NCE2 650 aa6.76□□□□□ -1.33
C11orf54-213ENST00000533585 KIAA1522Q9P206 1035 aaPredicted RBP6.76□□□□□ -1.33
C11orf54-213ENST00000533585 SMARCA5O60264 1052 aaPredicted RBP6.75□□□□□ -1.33
C11orf54-213ENST00000533585 PTGDRQ13258 359 aa6.75□□□□□ -1.33
C11orf54-213ENST00000533585 CFAP70Q5T0N1 1121 aa6.75□□□□□ -1.33
C11orf54-213ENST00000533585 HDGFL1Q5TGJ6 251 aa6.75□□□□□ -1.33
C11orf54-213ENST00000533585 ERCC3P19447 782 aa6.74□□□□□ -1.33
C11orf54-213ENST00000533585 SRPK2P78362 688 aaKnown RBP6.74□□□□□ -1.33
C11orf54-213ENST00000533585 MAP3K9P80192 1104 aa6.74□□□□□ -1.33
C11orf54-213ENST00000533585 DSG2Q14126 1118 aa6.74□□□□□ -1.33
C11orf54-213ENST00000533585 SPATA32Q96LK8 384 aa6.74□□□□□ -1.33
C11orf54-213ENST00000533585 CWC22Q9HCG8 908 aaKnown RBP6.74□□□□□ -1.33
C11orf54-213ENST00000533585 GNEQ9Y223 722 aaKnown RBP6.74□□□□□ -1.33
C11orf54-213ENST00000533585 CCDC61Q9Y6R9 512 aa6.74□□□□□ -1.33
C11orf54-213ENST00000533585 NCLP19338 710 aaKnown RBP6.73□□□□□ -1.33
C11orf54-213ENST00000533585 B4GALNT3Q6L9W6 998 aa6.73□□□□□ -1.33
C11orf54-213ENST00000533585 SREK1Q8WXA9 508 aaKnown RBP6.73□□□□□ -1.33
C11orf54-213ENST00000533585 TBC1D2BQ9UPU7 963 aa6.73□□□□□ -1.33
C11orf54-213ENST00000533585 TCF3P15923 654 aa6.72□□□□□ -1.33
C11orf54-213ENST00000533585 GOLGA2Q08379 1002 aa6.72□□□□□ -1.33
C11orf54-213ENST00000533585 TXNDC2Q86VQ3 553 aa6.72□□□□□ -1.33
C11orf54-213ENST00000533585 PPP1R12CQ9BZL4 782 aa6.72□□□□□ -1.33
C11orf54-213ENST00000533585 TSR1Q2NL82 804 aaKnown RBP6.71□□□□□ -1.34
C11orf54-213ENST00000533585 PPP2R2DQ66LE6 453 aa6.71□□□□□ -1.34
C11orf54-213ENST00000533585 FAM217BQ9NTX9 383 aaPredicted RBP6.71□□□□□ -1.34
C11orf54-213ENST00000533585 TMEM88BA6NKF7 163 aa6.7□□□□□ -1.34
C11orf54-213ENST00000533585 SOCS7O14512 581 aa6.7□□□□□ -1.34
C11orf54-213ENST00000533585 ZNF16P17020 682 aaPredicted RBP6.7□□□□□ -1.34
C11orf54-213ENST00000533585 DIXDC1Q155Q3 683 aa6.7□□□□□ -1.34
C11orf54-213ENST00000533585 ANKRD13AQ8IZ07 590 aa6.7□□□□□ -1.34
C11orf54-213ENST00000533585 CCER1Q8TC90 406 aaPredicted RBP6.7□□□□□ -1.34
C11orf54-213ENST00000533585 DDX12PQ92771 950 aa6.7□□□□□ -1.34
C11orf54-213ENST00000533585 AKT1S1Q96B36 256 aa6.7□□□□□ -1.34
C11orf54-213ENST00000533585 SIRT1Q96EB6 747 aa6.7□□□□□ -1.34
C11orf54-213ENST00000533585 C8orf37Q96NL8 207 aa6.7□□□□□ -1.34
C11orf54-213ENST00000533585 TBC1D2Q9BYX2 928 aa6.7□□□□□ -1.34
C11orf54-213ENST00000533585 ARID4BQ4LE39 1312 aaPredicted RBP6.7□□□□□ -1.34
C11orf54-213ENST00000533585 LMOD1P29536 600 aaPredicted RBP6.69□□□□□ -1.34
C11orf54-213ENST00000533585 FBXO31Q5XUX0 539 aaPredicted RBP6.69□□□□□ -1.34
C11orf54-213ENST00000533585 TMC2Q8TDI7 906 aa6.69□□□□□ -1.34
C11orf54-213ENST00000533585 ADAMTS19Q8TE59 1207 aa6.69□□□□□ -1.34
C11orf54-213ENST00000533585 BCL2L13Q9BXK5 485 aa6.69□□□□□ -1.34
C11orf54-213ENST00000533585 ATG7O95352 703 aa6.68□□□□□ -1.34
C11orf54-213ENST00000533585 PTGER2P43116 358 aa6.68□□□□□ -1.34
C11orf54-213ENST00000533585 FAM9AQ8IZU1 332 aaPredicted RBP6.68□□□□□ -1.34
C11orf54-213ENST00000533585 PHOX2BQ99453 314 aa6.68□□□□□ -1.34
C11orf54-213ENST00000533585 PPP1R1BQ9UD71 204 aaPredicted RBP6.68□□□□□ -1.34
C11orf54-213ENST00000533585 PALM3A6NDB9 673 aaPredicted RBP6.67□□□□□ -1.34
C11orf54-213ENST00000533585 MAP3K13O43283 966 aa6.67□□□□□ -1.34
C11orf54-213ENST00000533585 FOXK1P85037 733 aa6.67□□□□□ -1.34
C11orf54-213ENST00000533585 WASHC4Q2M389 1173 aa6.67□□□□□ -1.34
C11orf54-213ENST00000533585 CDCA8Q53HL2 280 aa6.67□□□□□ -1.34
C11orf54-213ENST00000533585 DNAJC14Q6Y2X3 702 aaPredicted RBP6.66□□□□□ -1.34
C11orf54-213ENST00000533585 PLPP6Q8IY26 295 aa6.66□□□□□ -1.34
C11orf54-213ENST00000533585 GIPC2Q8TF65 315 aa6.66□□□□□ -1.34
C11orf54-213ENST00000533585 UBXN4Q92575 508 aa6.66□□□□□ -1.34
C11orf54-213ENST00000533585 LIMD1Q9UGP4 676 aa6.66□□□□□ -1.34
C11orf54-213ENST00000533585 PRIM1P49642 420 aaKnown RBP6.65□□□□□ -1.34
C11orf54-213ENST00000533585 ZC3H6P61129 1189 aaKnown RBP6.65□□□□□ -1.34
C11orf54-213ENST00000533585 RIC3Q7Z5B4 369 aa6.65□□□□□ -1.34
C11orf54-213ENST00000533585 CADPSQ9ULU8 1353 aa6.65□□□□□ -1.35
C11orf54-213ENST00000533585 ANKRD62A6NC57 917 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms