RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 AGLP35573 1532 aa13.96□□□□□ -0.17
PTP4A2-213ENST00000532001 KIDINS220Q9ULH0 1771 aa13.96□□□□□ -0.18
PTP4A2-213ENST00000532001 SAMD9LQ8IVG5 1584 aa13.96□□□□□ -0.18
PTP4A2-213ENST00000532001 TRAPPC8Q9Y2L5 1435 aa13.95□□□□□ -0.18
PTP4A2-213ENST00000532001 GPATCH8Q9UKJ3 1502 aaKnown RBP13.95□□□□□ -0.18
PTP4A2-213ENST00000532001 AFAP1Q8N556 730 aa13.94□□□□□ -0.18
PTP4A2-213ENST00000532001 PREX1Q8TCU6 1659 aa13.93□□□□□ -0.18
PTP4A2-213ENST00000532001 EHBP1L1Q8N3D4 1523 aa13.92□□□□□ -0.18
PTP4A2-213ENST00000532001 PLEKHH2Q8IVE3 1493 aa13.92□□□□□ -0.18
PTP4A2-213ENST00000532001 CEP162Q5TB80 1403 aa13.91□□□□□ -0.18
PTP4A2-213ENST00000532001 KIAA1107Q9UPP5 1409 aa13.91□□□□□ -0.18
PTP4A2-213ENST00000532001 SYCP2Q9BX26 1530 aa13.91□□□□□ -0.18
PTP4A2-213ENST00000532001 ILDR1Q86SU0 546 aaPredicted RBP13.91□□□□□ -0.18
PTP4A2-213ENST00000532001 MIER1Q8N108 512 aa13.91□□□□□ -0.18
PTP4A2-213ENST00000532001 INO80Q9ULG1 1556 aaPredicted RBP13.9□□□□□ -0.18
PTP4A2-213ENST00000532001 SETD1BQ9UPS6 1966 aaKnown RBP13.9□□□□□ -0.18
PTP4A2-213ENST00000532001 TIAM1Q13009 1591 aa13.89□□□□□ -0.19
PTP4A2-213ENST00000532001 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
PTP4A2-213ENST00000532001 MLECQ14165 292 aa13.89□□□□□ -0.19
PTP4A2-213ENST00000532001 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
PTP4A2-213ENST00000532001 MTUS2Q5JR59 1369 aa13.88□□□□□ -0.19
PTP4A2-213ENST00000532001 C3P01024 1663 aa13.88□□□□□ -0.19
PTP4A2-213ENST00000532001 CCNB3Q8WWL7 1395 aa13.87□□□□□ -0.19
PTP4A2-213ENST00000532001 ATP7AQ04656 1500 aa13.87□□□□□ -0.19
PTP4A2-213ENST00000532001 PLXNC1O60486 1568 aa13.87□□□□□ -0.19
PTP4A2-213ENST00000532001 MROH2AA6NES4 1674 aa13.86□□□□□ -0.19
PTP4A2-213ENST00000532001 CNTLNQ9NXG0 1405 aa13.85□□□□□ -0.19
PTP4A2-213ENST00000532001 GABBR2O75899 941 aa13.85□□□□□ -0.19
PTP4A2-213ENST00000532001 PLCD3Q8N3E9 789 aa13.85□□□□□ -0.19
PTP4A2-213ENST00000532001 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
PTP4A2-213ENST00000532001 ADGBQ8N7X0 1667 aa13.83□□□□□ -0.2
PTP4A2-213ENST00000532001 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
PTP4A2-213ENST00000532001 CFDP1Q9UEE9 299 aaPredicted RBP13.83□□□□□ -0.2
PTP4A2-213ENST00000532001 MYT1LQ9UL68 1186 aa13.83□□□□□ -0.2
PTP4A2-213ENST00000532001 SUPT6HQ7KZ85 1726 aaKnown RBP13.83□□□□□ -0.2
PTP4A2-213ENST00000532001 SPAG9O60271 1321 aaKnown RBP13.83□□□□□ -0.2
PTP4A2-213ENST00000532001 MBD5Q9P267 1494 aa13.81□□□□□ -0.2
PTP4A2-213ENST00000532001 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
PTP4A2-213ENST00000532001 HSPA2P54652 639 aa13.81□□□□□ -0.2
PTP4A2-213ENST00000532001 ZNF777Q9ULD5 760 aaPredicted RBP13.81□□□□□ -0.2
PTP4A2-213ENST00000532001 UHRF1BP1Q6BDS2 1440 aa13.81□□□□□ -0.2
PTP4A2-213ENST00000532001 STRCQ7RTU9 1775 aa13.8□□□□□ -0.2
PTP4A2-213ENST00000532001 A2MP01023 1474 aa13.8□□□□□ -0.2
PTP4A2-213ENST00000532001 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
PTP4A2-213ENST00000532001 CLCN6P51797 869 aa13.79□□□□□ -0.2
PTP4A2-213ENST00000532001 HNRNPMP52272 730 aaKnown RBP eCLIP13.79□□□□□ -0.2
PTP4A2-213ENST00000532001 VPS8Q8N3P4 1428 aa13.79□□□□□ -0.2
PTP4A2-213ENST00000532001 CEBPAP49715 358 aaPredicted RBP13.78□□□□□ -0.2
PTP4A2-213ENST00000532001 FBXO41Q8TF61 875 aa13.78□□□□□ -0.2
PTP4A2-213ENST00000532001 RTEL1-TNFRSF6BF6WH68 1400 aa13.78□□□□□ -0.2
PTP4A2-213ENST00000532001 NPATQ14207 1427 aa13.78□□□□□ -0.2
PTP4A2-213ENST00000532001 MAP3K1Q13233 1512 aa13.77□□□□□ -0.21
PTP4A2-213ENST00000532001 CLTCQ00610 1675 aaKnown RBP13.76□□□□□ -0.21
PTP4A2-213ENST00000532001 ARHGEF5Q12774 1597 aa13.76□□□□□ -0.21
PTP4A2-213ENST00000532001 ZBTB47Q9UFB7 747 aaPredicted RBP13.76□□□□□ -0.21
PTP4A2-213ENST00000532001 FAM135AQ9P2D6 1515 aa13.75□□□□□ -0.21
PTP4A2-213ENST00000532001 CAMSAP2Q08AD1 1489 aa13.75□□□□□ -0.21
PTP4A2-213ENST00000532001 CCDC141Q6ZP82 1450 aa13.75□□□□□ -0.21
PTP4A2-213ENST00000532001 ESF1Q9H501 851 aaKnown RBP13.75□□□□□ -0.21
PTP4A2-213ENST00000532001 LRRC9Q6ZRR7 1453 aa13.74□□□□□ -0.21
PTP4A2-213ENST00000532001 ZNF142P52746 1687 aaPredicted RBP13.74□□□□□ -0.21
PTP4A2-213ENST00000532001 ZNF644Q9H582 1327 aaPredicted RBP13.73□□□□□ -0.21
PTP4A2-213ENST00000532001 PTPRTO14522 1441 aa13.72□□□□□ -0.21
PTP4A2-213ENST00000532001 MYO3AQ8NEV4 1616 aa13.72□□□□□ -0.21
PTP4A2-213ENST00000532001 ZMYM3Q14202 1370 aa13.71□□□□□ -0.21
PTP4A2-213ENST00000532001 VASPP50552 380 aaPredicted RBP13.71□□□□□ -0.21
PTP4A2-213ENST00000532001 DHX29Q7Z478 1369 aaKnown RBP13.71□□□□□ -0.22
PTP4A2-213ENST00000532001 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
PTP4A2-213ENST00000532001 NCOA1Q15788 1441 aa13.7□□□□□ -0.22
PTP4A2-213ENST00000532001 MAST1Q9Y2H9 1570 aa13.7□□□□□ -0.22
PTP4A2-213ENST00000532001 PTPRKQ15262 1439 aa13.69□□□□□ -0.22
PTP4A2-213ENST00000532001 PHF12Q96QT6 1004 aa13.68□□□□□ -0.22
PTP4A2-213ENST00000532001 CEP170BQ9Y4F5 1589 aaPredicted RBP13.67□□□□□ -0.22
PTP4A2-213ENST00000532001 RASEFQ8IZ41 740 aa13.67□□□□□ -0.22
PTP4A2-213ENST00000532001 TSPYL2Q9H2G4 693 aaPredicted RBP13.67□□□□□ -0.22
PTP4A2-213ENST00000532001 CAMSAP1Q5T5Y3 1602 aa13.67□□□□□ -0.22
PTP4A2-213ENST00000532001 MIA2Q96PC5 1412 aa13.66□□□□□ -0.22
PTP4A2-213ENST00000532001 KDM5DQ9BY66 1539 aa13.66□□□□□ -0.22
PTP4A2-213ENST00000532001 RNF17Q9BXT8 1623 aaKnown RBP13.66□□□□□ -0.22
PTP4A2-213ENST00000532001 LOC105371045A0A1W2PR82 267 aa13.66□□□□□ -0.22
PTP4A2-213ENST00000532001 CERKQ8TCT0 537 aa13.66□□□□□ -0.22
PTP4A2-213ENST00000532001 PLA2R1Q13018 1463 aa13.66□□□□□ -0.22
PTP4A2-213ENST00000532001 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
PTP4A2-213ENST00000532001 EIF2AK4Q9P2K8 1649 aaKnown RBP13.65□□□□□ -0.22
PTP4A2-213ENST00000532001 CCDC61Q9Y6R9 512 aa13.65□□□□□ -0.22
PTP4A2-213ENST00000532001 NUBP1P53384 320 aa13.64□□□□□ -0.23
PTP4A2-213ENST00000532001 ZC3H13Q5T200 1668 aaKnown RBP13.63□□□□□ -0.23
PTP4A2-213ENST00000532001 PZPP20742 1482 aa13.63□□□□□ -0.23
PTP4A2-213ENST00000532001 GGT6Q6P531 493 aa13.63□□□□□ -0.23
PTP4A2-213ENST00000532001 LTBP4Q8N2S1 1624 aa13.63□□□□□ -0.23
PTP4A2-213ENST00000532001 TCOF1Q13428 1488 aaKnown RBP13.62□□□□□ -0.23
PTP4A2-213ENST00000532001 IQSEC2Q5JU85 1478 aa13.62□□□□□ -0.23
PTP4A2-213ENST00000532001 CROCC2H7BZ55 1655 aa13.62□□□□□ -0.23
PTP4A2-213ENST00000532001 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
PTP4A2-213ENST00000532001 GALR2O43603 387 aaPredicted RBP13.61□□□□□ -0.23
PTP4A2-213ENST00000532001 DNMT1P26358 1616 aaKnown RBP13.61□□□□□ -0.23
PTP4A2-213ENST00000532001 TSPY4P0CV99 314 aa13.6□□□□□ -0.23
PTP4A2-213ENST00000532001 TSPY10P0CW01 314 aa13.6□□□□□ -0.23
PTP4A2-213ENST00000532001 KANK4Q5T7N3 995 aaPredicted RBP13.6□□□□□ -0.23
PTP4A2-213ENST00000532001 SHANK2Q9UPX8 1470 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms