RNA–Protein interactions for RNA: ENST00000531613.1

PCDHA8-202, Transcript of protocadherin alpha 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA8, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-202ENST00000531613 ATAD2BQ9ULI0 1458 aa21.85■■□□□ 1.09
PCDHA8-202ENST00000531613 MSNP26038 577 aaKnown RBP21.84■■□□□ 1.09
PCDHA8-202ENST00000531613 PTMSP20962 102 aa21.84■■□□□ 1.09
PCDHA8-202ENST00000531613 TRIM6-TRIM34B2RNG4 842 aa21.84■■□□□ 1.09
PCDHA8-202ENST00000531613 ST20-MTHFSA0A0A6YYL1 179 aa21.83■■□□□ 1.08
PCDHA8-202ENST00000531613 RBM19Q9Y4C8 960 aaKnown RBP21.83■■□□□ 1.08
PCDHA8-202ENST00000531613 KIF15Q9NS87 1388 aa21.81■■□□□ 1.08
PCDHA8-202ENST00000531613 RTN4Q9NQC3 1192 aaKnown RBP21.8■■□□□ 1.08
PCDHA8-202ENST00000531613 MFAP1P55081 439 aaKnown RBP21.79■■□□□ 1.08
PCDHA8-202ENST00000531613 SLKQ9H2G2 1235 aaPredicted RBP21.79■■□□□ 1.08
PCDHA8-202ENST00000531613 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
PCDHA8-202ENST00000531613 GTF2E1P29083 439 aaPredicted RBP21.78■■□□□ 1.08
PCDHA8-202ENST00000531613 PANK3Q9H999 370 aa21.78■■□□□ 1.08
PCDHA8-202ENST00000531613 MYBBP1AQ9BQG0 1328 aaKnown RBP21.78■■□□□ 1.08
PCDHA8-202ENST00000531613 COG3Q96JB2 828 aa21.77■■□□□ 1.08
PCDHA8-202ENST00000531613 EVC2Q86UK5 1308 aa21.77■■□□□ 1.08
PCDHA8-202ENST00000531613 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.07
PCDHA8-202ENST00000531613 CGNL1Q0VF96 1302 aa21.76■■□□□ 1.07
PCDHA8-202ENST00000531613 CCDC34Q96HJ3 373 aa21.76■■□□□ 1.07
PCDHA8-202ENST00000531613 SYAP1Q96A49 352 aaPredicted RBP21.75■■□□□ 1.07
PCDHA8-202ENST00000531613 G3V3G9 751 aa21.75■■□□□ 1.07
PCDHA8-202ENST00000531613 DCAF8Q5TAQ9 597 aa21.75■■□□□ 1.07
PCDHA8-202ENST00000531613 HSP90B1P14625 803 aaKnown RBP21.74■■□□□ 1.07
PCDHA8-202ENST00000531613 RRP7AQ9Y3A4 280 aaKnown RBP21.73■■□□□ 1.07
PCDHA8-202ENST00000531613 OSCARQ8IYS5 282 aa21.73■■□□□ 1.07
PCDHA8-202ENST00000531613 FRAT2O75474 233 aaPredicted RBP21.71■■□□□ 1.07
PCDHA8-202ENST00000531613 C1orf141Q5JVX7 400 aa21.71■■□□□ 1.07
PCDHA8-202ENST00000531613 KIAA2012Q0VF49 1180 aa21.7■■□□□ 1.06
PCDHA8-202ENST00000531613 MINK1Q8N4C8 1332 aaPredicted RBP21.68■■□□□ 1.06
PCDHA8-202ENST00000531613 TEFQ10587 303 aa21.68■■□□□ 1.06
PCDHA8-202ENST00000531613 ELL2O00472 640 aaPredicted RBP21.67■■□□□ 1.06
PCDHA8-202ENST00000531613 GZF1Q9H116 711 aaPredicted RBP21.67■■□□□ 1.06
PCDHA8-202ENST00000531613 TOMM22Q9NS69 142 aa21.67■■□□□ 1.06
PCDHA8-202ENST00000531613 TPM4P67936 248 aa21.66■■□□□ 1.06
PCDHA8-202ENST00000531613 DHX57Q6P158 1386 aaKnown RBP21.66■■□□□ 1.06
PCDHA8-202ENST00000531613 CSPP1Q1MSJ5 1256 aa21.66■■□□□ 1.06
PCDHA8-202ENST00000531613 KIF3AQ9Y496 699 aa21.65■■□□□ 1.06
PCDHA8-202ENST00000531613 NCBP3Q53F19 620 aaKnown RBP21.65■■□□□ 1.06
PCDHA8-202ENST00000531613 EVA1CP58658 441 aa21.65■■□□□ 1.06
PCDHA8-202ENST00000531613 E9PSI1 815 aa21.64■■□□□ 1.06
PCDHA8-202ENST00000531613 USP47Q96K76 1375 aa21.64■■□□□ 1.06
PCDHA8-202ENST00000531613 ST18O60284 1047 aa21.64■■□□□ 1.06
PCDHA8-202ENST00000531613 DEKP35659 375 aaKnown RBP21.64■■□□□ 1.05
PCDHA8-202ENST00000531613 SMARCA4P51532 1647 aa21.64■■□□□ 1.05
PCDHA8-202ENST00000531613 RASSF8Q8NHQ8 419 aa21.63■■□□□ 1.05
PCDHA8-202ENST00000531613 NOL8Q76FK4 1167 aaKnown RBP21.63■■□□□ 1.05
PCDHA8-202ENST00000531613 ZKSCAN2Q63HK3 967 aa21.62■■□□□ 1.05
PCDHA8-202ENST00000531613 KIF16BQ96L93 1317 aa21.62■■□□□ 1.05
PCDHA8-202ENST00000531613 PRKRIP1Q9H875 184 aaPredicted RBP21.62■■□□□ 1.05
PCDHA8-202ENST00000531613 BCL2L13Q9BXK5 485 aa21.61■■□□□ 1.05
PCDHA8-202ENST00000531613 TTC5Q8N0Z6 440 aa21.6■■□□□ 1.05
PCDHA8-202ENST00000531613 NEXNQ0ZGT2 675 aa21.59■■□□□ 1.05
PCDHA8-202ENST00000531613 MYOM3Q5VTT5 1437 aa21.59■■□□□ 1.05
PCDHA8-202ENST00000531613 GAPVD1Q14C86 1478 aa21.59■■□□□ 1.05
PCDHA8-202ENST00000531613 RUSC2Q8N2Y8 1516 aa21.59■■□□□ 1.05
PCDHA8-202ENST00000531613 DIAPH1O60610 1272 aaKnown RBP21.57■■□□□ 1.04
PCDHA8-202ENST00000531613 IPO9Q96P70 1041 aaKnown RBP21.57■■□□□ 1.04
PCDHA8-202ENST00000531613 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.57■■□□□ 1.04
PCDHA8-202ENST00000531613 CENPQQ7L2Z9 268 aaPredicted RBP21.57■■□□□ 1.04
PCDHA8-202ENST00000531613 ANKRD45Q5TZF3 282 aa21.56■■□□□ 1.04
PCDHA8-202ENST00000531613 RILPL2Q969X0 211 aa21.56■■□□□ 1.04
PCDHA8-202ENST00000531613 FOXD4L1Q9NU39 408 aa21.55■■□□□ 1.04
PCDHA8-202ENST00000531613 APAF1O14727 1248 aa21.55■■□□□ 1.04
PCDHA8-202ENST00000531613 NGEFQ8N5V2 710 aa21.55■■□□□ 1.04
PCDHA8-202ENST00000531613 PSME1Q06323 249 aa21.54■■□□□ 1.04
PCDHA8-202ENST00000531613 SF3A1Q15459 793 aaKnown RBP21.54■■□□□ 1.04
PCDHA8-202ENST00000531613 CHMP4CQ96CF2 233 aa21.54■■□□□ 1.04
PCDHA8-202ENST00000531613 STAC3Q96MF2 364 aa21.54■■□□□ 1.04
PCDHA8-202ENST00000531613 FAM69CQ0P6D2 419 aa21.54■■□□□ 1.04
PCDHA8-202ENST00000531613 GOLGA6L3A6NEY3 463 aa21.53■■□□□ 1.04
PCDHA8-202ENST00000531613 IGF1RP08069 1367 aa21.53■■□□□ 1.04
PCDHA8-202ENST00000531613 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.04
PCDHA8-202ENST00000531613 MARCH6O60337 910 aa21.52■■□□□ 1.04
PCDHA8-202ENST00000531613 EIF2S2P20042 333 aaKnown RBP21.52■■□□□ 1.04
PCDHA8-202ENST00000531613 LRRFIP1Q32MZ4 808 aaKnown RBP21.52■■□□□ 1.04
PCDHA8-202ENST00000531613 C9orf78Q9NZ63 289 aaPredicted RBP21.52■■□□□ 1.04
PCDHA8-202ENST00000531613 ZBED9Q6R2W3 1325 aa21.5■■□□□ 1.03
PCDHA8-202ENST00000531613 PHF14O94880 888 aa21.49■■□□□ 1.03
PCDHA8-202ENST00000531613 COG6Q9Y2V7 657 aa21.49■■□□□ 1.03
PCDHA8-202ENST00000531613 API5Q9BZZ5 524 aaKnown RBP21.49■■□□□ 1.03
PCDHA8-202ENST00000531613 PLIN1O60240 522 aa21.49■■□□□ 1.03
PCDHA8-202ENST00000531613 RRP1P56182 461 aaKnown RBP21.49■■□□□ 1.03
PCDHA8-202ENST00000531613 DIAPH3Q9NSV4 1193 aa21.49■■□□□ 1.03
PCDHA8-202ENST00000531613 NOC3LQ8WTT2 800 aaKnown RBP21.48■■□□□ 1.03
PCDHA8-202ENST00000531613 RIPK4P57078 832 aa21.48■■□□□ 1.03
PCDHA8-202ENST00000531613 DDX19BQ9UMR2 479 aa21.48■■□□□ 1.03
PCDHA8-202ENST00000531613 DDX58O95786 925 aaKnown RBP21.48■■□□□ 1.03
PCDHA8-202ENST00000531613 H3BQV1 296 aa21.47■■□□□ 1.03
PCDHA8-202ENST00000531613 IFFO2Q5TF58 517 aa21.47■■□□□ 1.03
PCDHA8-202ENST00000531613 MSH5O43196 834 aa21.47■■□□□ 1.03
PCDHA8-202ENST00000531613 FAM161AQ3B820 660 aa21.47■■□□□ 1.03
PCDHA8-202ENST00000531613 VPS53Q5VIR6 699 aa21.47■■□□□ 1.03
PCDHA8-202ENST00000531613 FAM184AQ8NB25 1140 aa21.47■■□□□ 1.03
PCDHA8-202ENST00000531613 AKAP17AQ02040 695 aaKnown RBP21.46■■□□□ 1.03
PCDHA8-202ENST00000531613 CREBRFQ8IUR6 639 aa21.46■■□□□ 1.03
PCDHA8-202ENST00000531613 RUFY2Q8WXA3 655 aa21.46■■□□□ 1.03
PCDHA8-202ENST00000531613 ATP6V1DQ9Y5K8 247 aa21.45■■□□□ 1.02
PCDHA8-202ENST00000531613 CPLX2Q6PUV4 134 aaKnown RBP21.44■■□□□ 1.02
PCDHA8-202ENST00000531613 RAD54L2Q9Y4B4 1467 aa21.44■■□□□ 1.02
PCDHA8-202ENST00000531613 SYNE3Q6ZMZ3 975 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms