RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 PKD2Q13563 968 aa18.15■□□□□ 0.5
LRRK1-207ENST00000531270 PCMTD1Q96MG8 357 aaPredicted RBP18.15■□□□□ 0.5
LRRK1-207ENST00000531270 TRIM34Q9BYJ4 488 aa18.15■□□□□ 0.5
LRRK1-207ENST00000531270 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.14■□□□□ 0.49
LRRK1-207ENST00000531270 ROCK2O75116 1388 aaKnown RBP18.14■□□□□ 0.49
LRRK1-207ENST00000531270 FBXW7Q969H0 707 aa18.14■□□□□ 0.49
LRRK1-207ENST00000531270 HDAC5Q9UQL6 1122 aa18.14■□□□□ 0.49
LRRK1-207ENST00000531270 FAM184AQ8NB25 1140 aa18.14■□□□□ 0.49
LRRK1-207ENST00000531270 TPM2P07951 284 aa18.13■□□□□ 0.49
LRRK1-207ENST00000531270 NGEFQ8N5V2 710 aa18.13■□□□□ 0.49
LRRK1-207ENST00000531270 MCTP1Q6DN14 999 aa18.12■□□□□ 0.49
LRRK1-207ENST00000531270 CHMP4AQ9BY43 222 aa18.12■□□□□ 0.49
LRRK1-207ENST00000531270 PHF14O94880 888 aa18.12■□□□□ 0.49
LRRK1-207ENST00000531270 ST18O60284 1047 aa18.11■□□□□ 0.49
LRRK1-207ENST00000531270 SAMD1Q6SPF0 538 aaPredicted RBP18.11■□□□□ 0.49
LRRK1-207ENST00000531270 KIF3AQ9Y496 699 aa18.11■□□□□ 0.49
LRRK1-207ENST00000531270 ZNF592Q92610 1267 aa18.1■□□□□ 0.49
LRRK1-207ENST00000531270 DHX16O60231 1041 aaKnown RBP18.09■□□□□ 0.49
LRRK1-207ENST00000531270 GOLGA6L19H0YKK7 550 aa18.09■□□□□ 0.49
LRRK1-207ENST00000531270 KLHL34Q8N239 644 aa18.09■□□□□ 0.49
LRRK1-207ENST00000531270 MYO15BQ96JP2 1530 aa18.09■□□□□ 0.49
LRRK1-207ENST00000531270 CWC22Q9HCG8 908 aaKnown RBP18.08■□□□□ 0.49
LRRK1-207ENST00000531270 BECN2A8MW95 431 aa18.08■□□□□ 0.48
LRRK1-207ENST00000531270 TPM1P09493 284 aa18.08■□□□□ 0.48
LRRK1-207ENST00000531270 ELL2O00472 640 aaPredicted RBP18.07■□□□□ 0.48
LRRK1-207ENST00000531270 SYNE3Q6ZMZ3 975 aa18.07■□□□□ 0.48
LRRK1-207ENST00000531270 RRP7AQ9Y3A4 280 aaKnown RBP18.07■□□□□ 0.48
LRRK1-207ENST00000531270 NOL10Q9BSC4 688 aaKnown RBP18.06■□□□□ 0.48
LRRK1-207ENST00000531270 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
LRRK1-207ENST00000531270 EVA1CP58658 441 aa18.06■□□□□ 0.48
LRRK1-207ENST00000531270 EID1Q9Y6B2 187 aa18.06■□□□□ 0.48
LRRK1-207ENST00000531270 CCDC70Q6NSX1 233 aa18.06■□□□□ 0.48
LRRK1-207ENST00000531270 TERF2IPQ9NYB0 399 aa18.06■□□□□ 0.48
LRRK1-207ENST00000531270 CENPJQ9HC77 1338 aaPredicted RBP18.05■□□□□ 0.48
LRRK1-207ENST00000531270 AMOTL1Q8IY63 956 aa18.04■□□□□ 0.48
LRRK1-207ENST00000531270 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.04■□□□□ 0.48
LRRK1-207ENST00000531270 CCER2I3L3R5 266 aa18.04■□□□□ 0.48
LRRK1-207ENST00000531270 APPP05067 770 aa18.03■□□□□ 0.48
LRRK1-207ENST00000531270 RALBP1Q15311 655 aa18.03■□□□□ 0.48
LRRK1-207ENST00000531270 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
LRRK1-207ENST00000531270 ANKRD45Q5TZF3 282 aa18.01■□□□□ 0.47
LRRK1-207ENST00000531270 TRIM29Q14134 588 aa18.01■□□□□ 0.47
LRRK1-207ENST00000531270 C1orf141Q5JVX7 400 aa18.01■□□□□ 0.47
LRRK1-207ENST00000531270 SYTL4Q96C24 671 aaPredicted RBP18■□□□□ 0.47
LRRK1-207ENST00000531270 BCL2L13Q9BXK5 485 aa18■□□□□ 0.47
LRRK1-207ENST00000531270 EEA1Q15075 1411 aa18■□□□□ 0.47
LRRK1-207ENST00000531270 DDX49Q9Y6V7 483 aaKnown RBP18■□□□□ 0.47
LRRK1-207ENST00000531270 FOSBP53539 338 aa17.99■□□□□ 0.47
LRRK1-207ENST00000531270 CCDC43Q96MW1 224 aaKnown RBP17.99■□□□□ 0.47
LRRK1-207ENST00000531270 RRP12Q5JTH9 1297 aaKnown RBP17.99■□□□□ 0.47
LRRK1-207ENST00000531270 EIF2S2P20042 333 aaKnown RBP17.99■□□□□ 0.47
LRRK1-207ENST00000531270 SLC4A3P48751 1232 aa17.99■□□□□ 0.47
LRRK1-207ENST00000531270 VPS37DQ86XT2 251 aa17.99■□□□□ 0.47
LRRK1-207ENST00000531270 NECTIN2Q92692 538 aa17.99■□□□□ 0.47
LRRK1-207ENST00000531270 GPS2Q13227 327 aa17.99■□□□□ 0.47
LRRK1-207ENST00000531270 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
LRRK1-207ENST00000531270 IPO9Q96P70 1041 aaKnown RBP17.98■□□□□ 0.47
LRRK1-207ENST00000531270 ZNF771Q7L3S4 317 aaPredicted RBP17.98■□□□□ 0.47
LRRK1-207ENST00000531270 IPO7O95373 1038 aaKnown RBP17.97■□□□□ 0.47
LRRK1-207ENST00000531270 DIAPH3Q9NSV4 1193 aa17.97■□□□□ 0.47
LRRK1-207ENST00000531270 EIF3AQ14152 1382 aaKnown RBP17.97■□□□□ 0.47
LRRK1-207ENST00000531270 KIF3BO15066 747 aa17.97■□□□□ 0.47
LRRK1-207ENST00000531270 MEX3CQ5U5Q3 659 aaKnown RBP17.97■□□□□ 0.47
LRRK1-207ENST00000531270 NAP1L1P55209 391 aaKnown RBP17.97■□□□□ 0.47
LRRK1-207ENST00000531270 BCL11BQ9C0K0 894 aaPredicted RBP17.97■□□□□ 0.47
LRRK1-207ENST00000531270 CCDC47Q96A33 483 aaKnown RBP17.96■□□□□ 0.47
LRRK1-207ENST00000531270 HSP90AA2PQ14568 343 aaPredicted RBP17.96■□□□□ 0.47
LRRK1-207ENST00000531270 CALRP27797 417 aaKnown RBP17.96■□□□□ 0.47
LRRK1-207ENST00000531270 ANO2Q9NQ90 1003 aa17.96■□□□□ 0.47
LRRK1-207ENST00000531270 DDX11L8A8MPP1 907 aa17.96■□□□□ 0.46
LRRK1-207ENST00000531270 NUP155O75694 1391 aa17.95■□□□□ 0.46
LRRK1-207ENST00000531270 NFXL1Q6ZNB6 911 aa17.95■□□□□ 0.46
LRRK1-207ENST00000531270 TTC5Q8N0Z6 440 aa17.95■□□□□ 0.46
LRRK1-207ENST00000531270 CT47A1Q5JQC4 288 aaPredicted RBP17.94■□□□□ 0.46
LRRK1-207ENST00000531270 TRAK1Q9UPV9 953 aa17.94■□□□□ 0.46
LRRK1-207ENST00000531270 HOMER1Q86YM7 354 aa17.94■□□□□ 0.46
LRRK1-207ENST00000531270 CPLX1O14810 134 aa17.94■□□□□ 0.46
LRRK1-207ENST00000531270 CPLX2Q6PUV4 134 aaKnown RBP17.93■□□□□ 0.46
LRRK1-207ENST00000531270 ANKRD20A12PQ8NF67 263 aa17.93■□□□□ 0.46
LRRK1-207ENST00000531270 ATP6V1DQ9Y5K8 247 aa17.92■□□□□ 0.46
LRRK1-207ENST00000531270 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
LRRK1-207ENST00000531270 C9orf78Q9NZ63 289 aaPredicted RBP17.92■□□□□ 0.46
LRRK1-207ENST00000531270 ODF2Q5BJF6 829 aa17.92■□□□□ 0.46
LRRK1-207ENST00000531270 FYB1O15117 783 aa17.92■□□□□ 0.46
LRRK1-207ENST00000531270 ZFYVE27Q5T4F4 411 aa17.91■□□□□ 0.46
LRRK1-207ENST00000531270 TEFQ10587 303 aa17.91■□□□□ 0.46
LRRK1-207ENST00000531270 BICD2Q8TD16 824 aa17.91■□□□□ 0.46
LRRK1-207ENST00000531270 MTMR7Q9Y216 660 aa17.91■□□□□ 0.46
LRRK1-207ENST00000531270 NEXNQ0ZGT2 675 aa17.9■□□□□ 0.46
LRRK1-207ENST00000531270 KDM4AO75164 1064 aa17.9■□□□□ 0.46
LRRK1-207ENST00000531270 WASHC2CQ9Y4E1 1318 aa17.9■□□□□ 0.46
LRRK1-207ENST00000531270 MPHOSPH9Q99550 1183 aa17.9■□□□□ 0.46
LRRK1-207ENST00000531270 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.45
LRRK1-207ENST00000531270 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.45
LRRK1-207ENST00000531270 CHMP4CQ96CF2 233 aa17.89■□□□□ 0.45
LRRK1-207ENST00000531270 PLIN1O60240 522 aa17.88■□□□□ 0.45
LRRK1-207ENST00000531270 IFIT2P09913 472 aaKnown RBP17.88■□□□□ 0.45
LRRK1-207ENST00000531270 PHF23Q9BUL5 403 aaPredicted RBP17.88■□□□□ 0.45
LRRK1-207ENST00000531270 LRRFIP1Q32MZ4 808 aaKnown RBP17.88■□□□□ 0.45
LRRK1-207ENST00000531270 ERICH2A1L162 156 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms