RNA–Protein interactions for RNA: ENST00000531008.5

RPS13-207, Transcript of ribosomal protein S13, humanhuman

TSL 2

Gene RPS13, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-207ENST00000531008 PDE4DQ08499 809 aa10.69□□□□□ -0.7
RPS13-207ENST00000531008 ZNF454Q8N9F8 522 aa10.69□□□□□ -0.7
RPS13-207ENST00000531008 CCDC102AQ96A19 550 aa10.69□□□□□ -0.7
RPS13-207ENST00000531008 NPDC1Q9NQX5 325 aaPredicted RBP10.69□□□□□ -0.7
RPS13-207ENST00000531008 KHSRPQ92945 711 aaKnown RBP eCLIP10.67□□□□□ -0.74e-8■■■□□ 18.3
RPS13-207ENST00000531008 CDHR5Q9HBB8 845 aa10.67□□□□□ -0.7
RPS13-207ENST00000531008 FECHP22830 423 aa10.66□□□□□ -0.7
RPS13-207ENST00000531008 AMHR2Q16671 573 aa10.66□□□□□ -0.7
RPS13-207ENST00000531008 TSR1Q2NL82 804 aaKnown RBP10.66□□□□□ -0.7
RPS13-207ENST00000531008 C6orf132Q5T0Z8 1188 aa10.66□□□□□ -0.7
RPS13-207ENST00000531008 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
RPS13-207ENST00000531008 PPP4R3BQ5MIZ7 849 aa10.64□□□□□ -0.71
RPS13-207ENST00000531008 KDM4CQ9H3R0 1056 aa10.64□□□□□ -0.71
RPS13-207ENST00000531008 RBM27Q9P2N5 1060 aaKnown RBP10.64□□□□□ -0.71
RPS13-207ENST00000531008 LHX6Q9UPM6 363 aa10.63□□□□□ -0.71
RPS13-207ENST00000531008 OTUD5Q96G74 571 aa10.62□□□□□ -0.71
RPS13-207ENST00000531008 GPBP1L1Q9HC44 474 aaPredicted RBP10.62□□□□□ -0.71
RPS13-207ENST00000531008 ADAM33Q9BZ11 813 aa10.61□□□□□ -0.71
RPS13-207ENST00000531008 GTF3C3Q9Y5Q9 886 aa10.61□□□□□ -0.71
RPS13-207ENST00000531008 BCL2L12Q9HB09 334 aa10.6□□□□□ -0.71
RPS13-207ENST00000531008 OATP04181 439 aa10.59□□□□□ -0.71
RPS13-207ENST00000531008 LHX8Q68G74 356 aa10.58□□□□□ -0.72
RPS13-207ENST00000531008 TTC13Q8NBP0 860 aa10.58□□□□□ -0.72
RPS13-207ENST00000531008 ERICH6Q7L0X2 663 aa10.57□□□□□ -0.72
RPS13-207ENST00000531008 PRSS12P56730 875 aa10.56□□□□□ -0.72
RPS13-207ENST00000531008 TTLL12Q14166 644 aaPredicted RBP10.56□□□□□ -0.72
RPS13-207ENST00000531008 PARP9Q8IXQ6 854 aa10.56□□□□□ -0.72
RPS13-207ENST00000531008 PTPREP23469 700 aa10.55□□□□□ -0.72
RPS13-207ENST00000531008 PADI6Q6TGC4 694 aa10.55□□□□□ -0.72
RPS13-207ENST00000531008 DDRGK1Q96HY6 314 aa10.55□□□□□ -0.72
RPS13-207ENST00000531008 CLCN1P35523 988 aa10.54□□□□□ -0.72
RPS13-207ENST00000531008 PPP1R3GB7ZBB8 358 aa10.53□□□□□ -0.72
RPS13-207ENST00000531008 IL27Q8NEV9 243 aa10.53□□□□□ -0.72
RPS13-207ENST00000531008 CDCA7LQ96GN5 454 aa10.53□□□□□ -0.72
RPS13-207ENST00000531008 ADGRG1Q9Y653 693 aa10.53□□□□□ -0.72
RPS13-207ENST00000531008 METTL3Q86U44 580 aaKnown RBP10.52□□□□□ -0.73
RPS13-207ENST00000531008 KCNH8Q96L42 1107 aa10.51□□□□□ -0.73
RPS13-207ENST00000531008 TMUB1Q9BVT8 246 aa10.51□□□□□ -0.73
RPS13-207ENST00000531008 GIGYF2Q6Y7W6 1299 aaKnown RBP10.5□□□□□ -0.73
RPS13-207ENST00000531008 RBM46Q8TBY0 533 aaKnown RBP10.5□□□□□ -0.73
RPS13-207ENST00000531008 PXYLP1Q8TE99 480 aa10.5□□□□□ -0.73
RPS13-207ENST00000531008 GPCPD1Q9NPB8 672 aa10.5□□□□□ -0.73
RPS13-207ENST00000531008 COL9A1P20849 921 aa10.49□□□□□ -0.73
RPS13-207ENST00000531008 FAM117AQ9C073 453 aa10.49□□□□□ -0.73
RPS13-207ENST00000531008 ONECUT3O60422 494 aaPredicted RBP10.48□□□□□ -0.73
RPS13-207ENST00000531008 PHOX2BQ99453 314 aa10.48□□□□□ -0.73
RPS13-207ENST00000531008 MDM2Q00987 491 aaPredicted RBP10.47□□□□□ -0.73
RPS13-207ENST00000531008 FAM161AQ3B820 660 aa10.45□□□□□ -0.74
RPS13-207ENST00000531008 PACS2Q86VP3 889 aa10.45□□□□□ -0.74
RPS13-207ENST00000531008 ERBB3P21860 1342 aa10.44□□□□□ -0.74
RPS13-207ENST00000531008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.44□□□□□ -0.74
RPS13-207ENST00000531008 PLEKHG3A1L390 1219 aa10.44□□□□□ -0.74
RPS13-207ENST00000531008 TRIM6-TRIM34B2RNG4 842 aa10.44□□□□□ -0.74
RPS13-207ENST00000531008 NBPF26B4DH59 902 aa10.44□□□□□ -0.74
RPS13-207ENST00000531008 REPIN1Q9BWE0 567 aaKnown RBP10.44□□□□□ -0.74
RPS13-207ENST00000531008 GOPCQ9HD26 462 aa10.44□□□□□ -0.74
RPS13-207ENST00000531008 KCNK17Q96T54 332 aa10.43□□□□□ -0.74
RPS13-207ENST00000531008 EYA1Q99502 592 aa10.43□□□□□ -0.74
RPS13-207ENST00000531008 FAM198AQ9UFP1 575 aa10.43□□□□□ -0.74
RPS13-207ENST00000531008 TSKSQ9UJT2 592 aa10.43□□□□□ -0.74
RPS13-207ENST00000531008 MS4A1P11836 297 aa10.42□□□□□ -0.74
RPS13-207ENST00000531008 SSTR3P32745 418 aaPredicted RBP10.42□□□□□ -0.74
RPS13-207ENST00000531008 FAM217BQ9NTX9 383 aaPredicted RBP10.42□□□□□ -0.74
RPS13-207ENST00000531008 ST18O60284 1047 aa10.41□□□□□ -0.74
RPS13-207ENST00000531008 PBX2P40425 430 aa10.41□□□□□ -0.74
RPS13-207ENST00000531008 ARHGAP33O14559 1287 aa10.4□□□□□ -0.74
RPS13-207ENST00000531008 TATDN2Q93075 761 aa10.4□□□□□ -0.74
RPS13-207ENST00000531008 SLC4A5Q9BY07 1137 aa10.4□□□□□ -0.74
RPS13-207ENST00000531008 RCCD1A6NED2 376 aa10.39□□□□□ -0.75
RPS13-207ENST00000531008 EMP3P54852 163 aa10.39□□□□□ -0.75
RPS13-207ENST00000531008 VARS2Q5ST30 1063 aaKnown RBP10.39□□□□□ -0.75
RPS13-207ENST00000531008 NUDT18Q6ZVK8 323 aa10.39□□□□□ -0.75
RPS13-207ENST00000531008 RSPH6AQ9H0K4 717 aa10.39□□□□□ -0.75
RPS13-207ENST00000531008 DNAJB2P25686 324 aa10.38□□□□□ -0.75
RPS13-207ENST00000531008 ZBED2Q9BTP6 218 aa10.38□□□□□ -0.75
RPS13-207ENST00000531008 PNMA3Q9UL41 463 aa10.38□□□□□ -0.75
RPS13-207ENST00000531008 SULF1Q8IWU6 871 aa10.36□□□□□ -0.75
RPS13-207ENST00000531008 BEGAINQ9BUH8 593 aa10.36□□□□□ -0.75
RPS13-207ENST00000531008 DIXDC1Q155Q3 683 aa10.35□□□□□ -0.75
RPS13-207ENST00000531008 PROX2Q3B8N5 592 aa10.35□□□□□ -0.75
RPS13-207ENST00000531008 SH3D19Q5HYK7 790 aa10.35□□□□□ -0.75
RPS13-207ENST00000531008 ZNF687Q8N1G0 1237 aa10.35□□□□□ -0.75
RPS13-207ENST00000531008 NLRP7Q8WX94 980 aa10.35□□□□□ -0.75
RPS13-207ENST00000531008 TIMELESSQ9UNS1 1208 aa10.35□□□□□ -0.75
RPS13-207ENST00000531008 PSEN2P49810 448 aa10.34□□□□□ -0.75
RPS13-207ENST00000531008 TMEM134Q9H6X4 195 aa10.34□□□□□ -0.75
RPS13-207ENST00000531008 KIAA1468Q9P260 1216 aa10.34□□□□□ -0.75
RPS13-207ENST00000531008 RABGEF1Q9UJ41 708 aa10.34□□□□□ -0.75
RPS13-207ENST00000531008 PCMTD1Q96MG8 357 aaPredicted RBP10.33□□□□□ -0.76
RPS13-207ENST00000531008 MARVELD3Q96A59 401 aa10.32□□□□□ -0.76
RPS13-207ENST00000531008 FAM205CA6NFA0 338 aa10.31□□□□□ -0.76
RPS13-207ENST00000531008 C3orf80F5H4A9 247 aa10.31□□□□□ -0.76
RPS13-207ENST00000531008 SKIV2LQ15477 1246 aaKnown RBP10.31□□□□□ -0.76
RPS13-207ENST00000531008 POTEEQ6S8J3 1075 aa10.31□□□□□ -0.76
RPS13-207ENST00000531008 C14orf37Q86TY3 774 aa10.31□□□□□ -0.76
RPS13-207ENST00000531008 FAM163AQ96GL9 167 aaPredicted RBP10.31□□□□□ -0.76
RPS13-207ENST00000531008 RSPH4AQ5TD94 716 aa10.29□□□□□ -0.76
RPS13-207ENST00000531008 TK2O00142 265 aa10.28□□□□□ -0.76
RPS13-207ENST00000531008 SMAPO00193 183 aa10.28□□□□□ -0.76
RPS13-207ENST00000531008 CD46P15529 392 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms