RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 TYW1BQ6NUM6 668 aa16.98■□□□□ 0.31
CCDC90B-217ENST00000530253 CAMK2BQ13554 666 aa16.97■□□□□ 0.31
CCDC90B-217ENST00000530253 PCDHGA10Q9Y5H3 936 aa16.97■□□□□ 0.31
CCDC90B-217ENST00000530253 UNC13AQ9UPW8 1703 aa16.96■□□□□ 0.3
CCDC90B-217ENST00000530253 PTPN5P54829 565 aa16.93■□□□□ 0.3
CCDC90B-217ENST00000530253 THSD4Q6ZMP0 1018 aa16.93■□□□□ 0.3
CCDC90B-217ENST00000530253 WNT2BQ93097 391 aa16.93■□□□□ 0.3
CCDC90B-217ENST00000530253 SCRIBQ14160 1630 aa16.92■□□□□ 0.3
CCDC90B-217ENST00000530253 EPAS1Q99814 870 aa16.91■□□□□ 0.3
CCDC90B-217ENST00000530253 RABGEF1Q9UJ41 708 aa16.89■□□□□ 0.29
CCDC90B-217ENST00000530253 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.88■□□□□ 0.29
CCDC90B-217ENST00000530253 AMER1Q5JTC6 1135 aaPredicted RBP16.87■□□□□ 0.29
CCDC90B-217ENST00000530253 BICRAQ9NZM4 1560 aa16.86■□□□□ 0.29
CCDC90B-217ENST00000530253 DPYSL4O14531 572 aa16.86■□□□□ 0.29
CCDC90B-217ENST00000530253 SPRYD3Q8NCJ5 442 aa16.85■□□□□ 0.29
CCDC90B-217ENST00000530253 ONECUT3O60422 494 aaPredicted RBP16.81■□□□□ 0.28
CCDC90B-217ENST00000530253 COL9A1P20849 921 aa16.81■□□□□ 0.28
CCDC90B-217ENST00000530253 IFFO2Q5TF58 517 aa16.81■□□□□ 0.28
CCDC90B-217ENST00000530253 LAPTM4BQ86VI4 370 aa16.81■□□□□ 0.28
CCDC90B-217ENST00000530253 ANKK1Q8NFD2 765 aa16.81■□□□□ 0.28
CCDC90B-217ENST00000530253 PROX2Q3B8N5 592 aa16.8■□□□□ 0.28
CCDC90B-217ENST00000530253 C6orf132Q5T0Z8 1188 aa16.78■□□□□ 0.28
CCDC90B-217ENST00000530253 SPDYE16A6NNV3 312 aaPredicted RBP16.74■□□□□ 0.27
CCDC90B-217ENST00000530253 PDIA6Q15084 440 aa16.73■□□□□ 0.27
CCDC90B-217ENST00000530253 RGS20O76081 388 aa16.72■□□□□ 0.27
CCDC90B-217ENST00000530253 KIAA1468Q9P260 1216 aa16.72■□□□□ 0.27
CCDC90B-217ENST00000530253 DDX12PQ92771 950 aa16.71■□□□□ 0.27
CCDC90B-217ENST00000530253 TRIM6-TRIM34B2RNG4 842 aa16.69■□□□□ 0.26
CCDC90B-217ENST00000530253 NYAP1Q6ZVC0 841 aa16.69■□□□□ 0.26
CCDC90B-217ENST00000530253 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-217ENST00000530253 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
CCDC90B-217ENST00000530253 EN1Q05925 392 aaPredicted RBP16.67■□□□□ 0.26
CCDC90B-217ENST00000530253 NBR1Q14596 966 aa16.67■□□□□ 0.26
CCDC90B-217ENST00000530253 WDR70Q9NW82 654 aa16.67■□□□□ 0.26
CCDC90B-217ENST00000530253 SOWAHBA6NEL2 793 aa16.66■□□□□ 0.26
CCDC90B-217ENST00000530253 E2F4Q16254 413 aa16.66■□□□□ 0.26
CCDC90B-217ENST00000530253 ZFRQ96KR1 1074 aaKnown RBP16.66■□□□□ 0.26
CCDC90B-217ENST00000530253 MAP3K7O43318 606 aa16.64■□□□□ 0.25
CCDC90B-217ENST00000530253 FAM98CQ17RN3 349 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-217ENST00000530253 A0A0G2JS52 829 aa16.62■□□□□ 0.25
CCDC90B-217ENST00000530253 ARIH1Q9Y4X5 557 aaPredicted RBP16.62■□□□□ 0.25
CCDC90B-217ENST00000530253 BCAMP50895 628 aa16.61■□□□□ 0.25
CCDC90B-217ENST00000530253 PAXIP1Q6ZW49 1069 aaPredicted RBP16.61■□□□□ 0.25
CCDC90B-217ENST00000530253 CFAP44Q96MT7 982 aa16.61■□□□□ 0.25
CCDC90B-217ENST00000530253 PACS2Q86VP3 889 aa16.6■□□□□ 0.25
CCDC90B-217ENST00000530253 SEPT9Q9UHD8 586 aaPredicted RBP16.6■□□□□ 0.25
CCDC90B-217ENST00000530253 CERKQ8TCT0 537 aa16.58■□□□□ 0.24
CCDC90B-217ENST00000530253 ITGBL1O95965 494 aaPredicted RBP16.57■□□□□ 0.24
CCDC90B-217ENST00000530253 RTN4Q9NQC3 1192 aaKnown RBP16.57■□□□□ 0.24
CCDC90B-217ENST00000530253 LRCH3Q96II8 777 aa16.55■□□□□ 0.24
CCDC90B-217ENST00000530253 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.55■□□□□ 0.24
CCDC90B-217ENST00000530253 TSR1Q2NL82 804 aaKnown RBP16.54■□□□□ 0.24
CCDC90B-217ENST00000530253 TSR3Q9UJK0 312 aaKnown RBP16.52■□□□□ 0.24
CCDC90B-217ENST00000530253 WBP1LQ9NX94 342 aa16.5■□□□□ 0.23
CCDC90B-217ENST00000530253 TSKSQ9UJT2 592 aa16.49■□□□□ 0.23
CCDC90B-217ENST00000530253 GRXCR2A6NFK2 248 aa16.47■□□□□ 0.23
CCDC90B-217ENST00000530253 PRSS12P56730 875 aa16.47■□□□□ 0.23
CCDC90B-217ENST00000530253 CDCA7LQ96GN5 454 aa16.47■□□□□ 0.23
CCDC90B-217ENST00000530253 HPS5Q9UPZ3 1129 aa16.47■□□□□ 0.23
CCDC90B-217ENST00000530253 KCNC4Q03721 635 aa16.45■□□□□ 0.22
CCDC90B-217ENST00000530253 NBPF26B4DH59 902 aa16.44■□□□□ 0.22
CCDC90B-217ENST00000530253 IRX2Q9BZI1 471 aaPredicted RBP16.41■□□□□ 0.22
CCDC90B-217ENST00000530253 RBM27Q9P2N5 1060 aaKnown RBP16.41■□□□□ 0.22
CCDC90B-217ENST00000530253 PPP4CP60510 307 aa16.39■□□□□ 0.21
CCDC90B-217ENST00000530253 OSBPP22059 807 aa16.37■□□□□ 0.21
CCDC90B-217ENST00000530253 EIF4G1Q04637 1599 aaKnown RBP16.36■□□□□ 0.21
CCDC90B-217ENST00000530253 TATDN2Q93075 761 aa16.36■□□□□ 0.21
CCDC90B-217ENST00000530253 HDGFP51858 240 aaKnown RBP16.35■□□□□ 0.21
CCDC90B-217ENST00000530253 PNMA3Q9UL41 463 aa16.35■□□□□ 0.21
CCDC90B-217ENST00000530253 PRIM1P49642 420 aaKnown RBP16.34■□□□□ 0.21
CCDC90B-217ENST00000530253 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
CCDC90B-217ENST00000530253 SMAPO00193 183 aa16.32■□□□□ 0.2
CCDC90B-217ENST00000530253 CC2D2AQ9P2K1 1620 aa16.31■□□□□ 0.2
CCDC90B-217ENST00000530253 CECR2Q9BXF3 1484 aa16.31■□□□□ 0.2
CCDC90B-217ENST00000530253 NECTIN2Q92692 538 aa16.31■□□□□ 0.2
CCDC90B-217ENST00000530253 FAM198AQ9UFP1 575 aa16.31■□□□□ 0.2
CCDC90B-217ENST00000530253 CDHR5Q9HBB8 845 aa16.3■□□□□ 0.2
CCDC90B-217ENST00000530253 NUDT18Q6ZVK8 323 aa16.26■□□□□ 0.19
CCDC90B-217ENST00000530253 ARHGEF1Q92888 912 aaKnown RBP16.25■□□□□ 0.19
CCDC90B-217ENST00000530253 SLC4A3P48751 1232 aa16.23■□□□□ 0.19
CCDC90B-217ENST00000530253 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
CCDC90B-217ENST00000530253 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.19
CCDC90B-217ENST00000530253 RNF40O75150 1001 aa16.21■□□□□ 0.19
CCDC90B-217ENST00000530253 TTC13Q8NBP0 860 aa16.21■□□□□ 0.19
CCDC90B-217ENST00000530253 IL21Q9HBE4 155 aa16.2■□□□□ 0.18
CCDC90B-217ENST00000530253 C3orf80F5H4A9 247 aa16.19■□□□□ 0.18
CCDC90B-217ENST00000530253 TJAP1Q5JTD0 557 aa16.19■□□□□ 0.18
CCDC90B-217ENST00000530253 PADI6Q6TGC4 694 aa16.19■□□□□ 0.18
CCDC90B-217ENST00000530253 SLF2Q8IX21 1173 aa16.18■□□□□ 0.18
CCDC90B-217ENST00000530253 MROH2BQ7Z745 1585 aa16.17■□□□□ 0.18
CCDC90B-217ENST00000530253 MTRQ99707 1265 aa16.16■□□□□ 0.18
CCDC90B-217ENST00000530253 NPDC1Q9NQX5 325 aaPredicted RBP16.16■□□□□ 0.18
CCDC90B-217ENST00000530253 TSHZ2Q9NRE2 1034 aa16.14■□□□□ 0.17
CCDC90B-217ENST00000530253 LAPTM4AQ15012 233 aa16.12■□□□□ 0.17
CCDC90B-217ENST00000530253 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
CCDC90B-217ENST00000530253 KCNV2Q8TDN2 545 aa16.12■□□□□ 0.17
CCDC90B-217ENST00000530253 SWT1Q5T5J6 900 aaKnown RBP16.11■□□□□ 0.17
CCDC90B-217ENST00000530253 PRR14Q9BWN1 585 aa16.1■□□□□ 0.17
CCDC90B-217ENST00000530253 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
CCDC90B-217ENST00000530253 APLP1P51693 650 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms