RNA–Protein interactions for RNA: ENST00000529006.6

KDM2A-210, Transcript of lysine demethylase 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM2A, Length 6,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-210ENST00000529006 MEX3CQ5U5Q3 659 aaKnown RBP15.19■□□□□ 0.02
KDM2A-210ENST00000529006 USP35Q9P2H5 1018 aa15.19■□□□□ 0.02
KDM2A-210ENST00000529006 SETQ01105 290 aaPredicted RBP15.18■□□□□ 0.02
KDM2A-210ENST00000529006 RCAN3Q9UKA8 241 aa15.18■□□□□ 0.02
KDM2A-210ENST00000529006 CLUAP1Q96AJ1 413 aa15.18■□□□□ 0.02
KDM2A-210ENST00000529006 NGEFQ8N5V2 710 aa15.18■□□□□ 0.02
KDM2A-210ENST00000529006 PCMTD1Q96MG8 357 aaPredicted RBP15.18■□□□□ 0.02
KDM2A-210ENST00000529006 EID1Q9Y6B2 187 aa15.18■□□□□ 0.02
KDM2A-210ENST00000529006 KIF27Q86VH2 1401 aa15.18■□□□□ 0.02
KDM2A-210ENST00000529006 FOXD4L6Q3SYB3 417 aaPredicted RBP15.17■□□□□ 0.02
KDM2A-210ENST00000529006 SAMD1Q6SPF0 538 aaPredicted RBP15.17■□□□□ 0.02
KDM2A-210ENST00000529006 FOXD4L3Q6VB84 417 aaPredicted RBP15.17■□□□□ 0.02
KDM2A-210ENST00000529006 RILPL2Q969X0 211 aa15.17■□□□□ 0.02
KDM2A-210ENST00000529006 NOL10Q9BSC4 688 aaKnown RBP15.17■□□□□ 0.02
KDM2A-210ENST00000529006 HDAC5Q9UQL6 1122 aa15.17■□□□□ 0.02
KDM2A-210ENST00000529006 PKD2Q13563 968 aa15.16■□□□□ 0.02
KDM2A-210ENST00000529006 CHMP4AQ9BY43 222 aa15.16■□□□□ 0.02
KDM2A-210ENST00000529006 FAM184AQ8NB25 1140 aa15.16■□□□□ 0.02
KDM2A-210ENST00000529006 AMOTL1Q8IY63 956 aa15.15■□□□□ 0.02
KDM2A-210ENST00000529006 DHX16O60231 1041 aaKnown RBP15.14■□□□□ 0.01
KDM2A-210ENST00000529006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.14■□□□□ 0.01
KDM2A-210ENST00000529006 TCERG1O14776 1098 aaKnown RBP15.14■□□□□ 0.01
KDM2A-210ENST00000529006 PHF14O94880 888 aa15.14■□□□□ 0.01
KDM2A-210ENST00000529006 MCTP1Q6DN14 999 aa15.14■□□□□ 0.01
KDM2A-210ENST00000529006 SYNE3Q6ZMZ3 975 aa15.13■□□□□ 0.01
KDM2A-210ENST00000529006 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.13■□□□□ 0.013e-6■■■■■ 60.2
KDM2A-210ENST00000529006 KIF3AQ9Y496 699 aa15.12■□□□□ 0.01
KDM2A-210ENST00000529006 ST18O60284 1047 aa15.12■□□□□ 0.01
KDM2A-210ENST00000529006 TERF2IPQ9NYB0 399 aa15.12■□□□□ 0.01
KDM2A-210ENST00000529006 C1orf141Q5JVX7 400 aa15.11■□□□□ 0.01
KDM2A-210ENST00000529006 TPM1P09493 284 aa15.11■□□□□ 0.01
KDM2A-210ENST00000529006 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
KDM2A-210ENST00000529006 EIF3AQ14152 1382 aaKnown RBP15.11■□□□□ 0.01
KDM2A-210ENST00000529006 BAZ1BQ9UIG0 1483 aaKnown RBP15.11■□□□□ 0.01
KDM2A-210ENST00000529006 SYTL4Q96C24 671 aaPredicted RBP15.1■□□□□ 0.01
KDM2A-210ENST00000529006 GOLGA6L19H0YKK7 550 aa15.1■□□□□ 0.01
KDM2A-210ENST00000529006 RBM19Q9Y4C8 960 aaKnown RBP15.1■□□□□ 0.01
KDM2A-210ENST00000529006 CCDC70Q6NSX1 233 aa15.1■□□□□ 0.01
KDM2A-210ENST00000529006 WRNQ14191 1432 aaPredicted RBP eCLIP15.09■□□□□ 0.01
KDM2A-210ENST00000529006 VPS37DQ86XT2 251 aa15.08■□□□□ 0.01
KDM2A-210ENST00000529006 EEA1Q15075 1411 aa15.08■□□□□ 0.01
KDM2A-210ENST00000529006 APPP05067 770 aa15.08■□□□□ 0
KDM2A-210ENST00000529006 ZNF592Q92610 1267 aa15.08■□□□□ 0
KDM2A-210ENST00000529006 CCDC43Q96MW1 224 aaKnown RBP15.08■□□□□ 0
KDM2A-210ENST00000529006 LMOD3Q0VAK6 560 aa15.08■□□□□ 0
KDM2A-210ENST00000529006 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
KDM2A-210ENST00000529006 TRIM29Q14134 588 aa15.07■□□□□ 0
KDM2A-210ENST00000529006 CENPJQ9HC77 1338 aaPredicted RBP15.07■□□□□ 0
KDM2A-210ENST00000529006 BECN2A8MW95 431 aa15.06■□□□□ 0
KDM2A-210ENST00000529006 AEBP2Q6ZN18 517 aaPredicted RBP15.06■□□□□ 0
KDM2A-210ENST00000529006 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
KDM2A-210ENST00000529006 ELL2O00472 640 aaPredicted RBP15.06■□□□□ 0
KDM2A-210ENST00000529006 RALBP1Q15311 655 aa15.06■□□□□ 0
KDM2A-210ENST00000529006 EIF2S2P20042 333 aaKnown RBP15.05■□□□□ -0
KDM2A-210ENST00000529006 FOSBP53539 338 aa15.05■□□□□ -0
KDM2A-210ENST00000529006 NECTIN2Q92692 538 aa15.05■□□□□ -0
KDM2A-210ENST00000529006 KIF3BO15066 747 aa15.04■□□□□ -0
KDM2A-210ENST00000529006 TTC5Q8N0Z6 440 aa15.04■□□□□ -0
KDM2A-210ENST00000529006 CCDC47Q96A33 483 aaKnown RBP15.04■□□□□ -0
KDM2A-210ENST00000529006 ANKRD45Q5TZF3 282 aa15.03■□□□□ -0
KDM2A-210ENST00000529006 ANO2Q9NQ90 1003 aa15.03■□□□□ -0
KDM2A-210ENST00000529006 NFXL1Q6ZNB6 911 aa15.02■□□□□ -0
KDM2A-210ENST00000529006 RRP12Q5JTH9 1297 aaKnown RBP15.02■□□□□ -0
KDM2A-210ENST00000529006 FYB1O15117 783 aa15.02■□□□□ -0
KDM2A-210ENST00000529006 NAP1L1P55209 391 aaKnown RBP15.02□□□□□ -0.01
KDM2A-210ENST00000529006 DIAPH3Q9NSV4 1193 aa15.02□□□□□ -0.01
KDM2A-210ENST00000529006 NUP155O75694 1391 aa15.02□□□□□ -0.01
KDM2A-210ENST00000529006 ARHGAP35Q9NRY4 1499 aa15.02□□□□□ -0.01
KDM2A-210ENST00000529006 CCER2I3L3R5 266 aa15.01□□□□□ -0.01
KDM2A-210ENST00000529006 FHAD1B1AJZ9 1412 aa15.01□□□□□ -0.01
KDM2A-210ENST00000529006 WASHC2CQ9Y4E1 1318 aa15.01□□□□□ -0.01
KDM2A-210ENST00000529006 CT47A1Q5JQC4 288 aaPredicted RBP15.01□□□□□ -0.01
KDM2A-210ENST00000529006 TRAK1Q9UPV9 953 aa15□□□□□ -0.01
KDM2A-210ENST00000529006 GPS2Q13227 327 aa15□□□□□ -0.01
KDM2A-210ENST00000529006 ODF2Q5BJF6 829 aa15□□□□□ -0.01
KDM2A-210ENST00000529006 BCL2L13Q9BXK5 485 aa14.99□□□□□ -0.01
KDM2A-210ENST00000529006 C9orf78Q9NZ63 289 aaPredicted RBP14.99□□□□□ -0.01
KDM2A-210ENST00000529006 IPO7O95373 1038 aaKnown RBP14.99□□□□□ -0.01
KDM2A-210ENST00000529006 RB1CC1Q8TDY2 1594 aa14.99□□□□□ -0.01
KDM2A-210ENST00000529006 ANKRD20A12PQ8NF67 263 aa14.98□□□□□ -0.01
KDM2A-210ENST00000529006 MTMR7Q9Y216 660 aa14.98□□□□□ -0.01
KDM2A-210ENST00000529006 NEXNQ0ZGT2 675 aa14.98□□□□□ -0.01
KDM2A-210ENST00000529006 SETD5Q9C0A6 1442 aa14.98□□□□□ -0.01
KDM2A-210ENST00000529006 TEFQ10587 303 aa14.98□□□□□ -0.01
KDM2A-210ENST00000529006 ZFYVE27Q5T4F4 411 aa14.98□□□□□ -0.01
KDM2A-210ENST00000529006 RBM33Q96EV2 1170 aaKnown RBP14.98□□□□□ -0.01
KDM2A-210ENST00000529006 KDM4AO75164 1064 aa14.97□□□□□ -0.01
KDM2A-210ENST00000529006 CPLX1O14810 134 aa14.97□□□□□ -0.01
KDM2A-210ENST00000529006 LRRFIP1Q32MZ4 808 aaKnown RBP14.97□□□□□ -0.01
KDM2A-210ENST00000529006 ERICH2A1L162 156 aa14.97□□□□□ -0.01
KDM2A-210ENST00000529006 DDX11L8A8MPP1 907 aa14.97□□□□□ -0.01
KDM2A-210ENST00000529006 CALRP27797 417 aaKnown RBP14.97□□□□□ -0.01
KDM2A-210ENST00000529006 ZNF771Q7L3S4 317 aaPredicted RBP14.97□□□□□ -0.01
KDM2A-210ENST00000529006 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
KDM2A-210ENST00000529006 HNRNPMP52272 730 aaKnown RBP eCLIP14.97□□□□□ -0.011e-6■■■■■ 28.1
KDM2A-210ENST00000529006 CPLX2Q6PUV4 134 aaKnown RBP14.97□□□□□ -0.01
KDM2A-210ENST00000529006 DDX49Q9Y6V7 483 aaKnown RBP14.97□□□□□ -0.01
KDM2A-210ENST00000529006 TNIKQ9UKE5 1360 aa14.97□□□□□ -0.01
KDM2A-210ENST00000529006 COG3Q96JB2 828 aa14.96□□□□□ -0.01
KDM2A-210ENST00000529006 BCL11BQ9C0K0 894 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms