RNA–Protein interactions for RNA: ENST00000526539.2

SLC38A6-209, Transcript of solute carrier family 38 member 6, humanhuman

TSL 4

Gene SLC38A6, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-209ENST00000526539 RB1CC1Q8TDY2 1594 aa13.29□□□□□ -0.28
SLC38A6-209ENST00000526539 GRXCR2A6NFK2 248 aa13.29□□□□□ -0.28
SLC38A6-209ENST00000526539 NBR1Q14596 966 aa13.29□□□□□ -0.28
SLC38A6-209ENST00000526539 PTPREP23469 700 aa13.27□□□□□ -0.29
SLC38A6-209ENST00000526539 MLLT3P42568 568 aaPredicted RBP13.26□□□□□ -0.29
SLC38A6-209ENST00000526539 DMRTA1Q5VZB9 504 aa13.26□□□□□ -0.29
SLC38A6-209ENST00000526539 ANKRD13DQ6ZTN6 518 aa13.26□□□□□ -0.29
SLC38A6-209ENST00000526539 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
SLC38A6-209ENST00000526539 SEMA3EO15041 775 aa13.25□□□□□ -0.29
SLC38A6-209ENST00000526539 RBM33Q96EV2 1170 aaKnown RBP13.25□□□□□ -0.29
SLC38A6-209ENST00000526539 OSBPP22059 807 aa13.24□□□□□ -0.29
SLC38A6-209ENST00000526539 PRIM1P49642 420 aaKnown RBP13.24□□□□□ -0.29
SLC38A6-209ENST00000526539 EN1Q05925 392 aaPredicted RBP13.24□□□□□ -0.29
SLC38A6-209ENST00000526539 C6orf132Q5T0Z8 1188 aa13.22□□□□□ -0.29
SLC38A6-209ENST00000526539 SPNS2Q8IVW8 549 aa13.22□□□□□ -0.29
SLC38A6-209ENST00000526539 MAP3K7O43318 606 aa13.2□□□□□ -0.3
SLC38A6-209ENST00000526539 COL9A1P20849 921 aa13.19□□□□□ -0.3
SLC38A6-209ENST00000526539 TSR1Q2NL82 804 aaKnown RBP13.19□□□□□ -0.3
SLC38A6-209ENST00000526539 PPP1R3GB7ZBB8 358 aa13.18□□□□□ -0.3
SLC38A6-209ENST00000526539 TK2O00142 265 aa13.18□□□□□ -0.3
SLC38A6-209ENST00000526539 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
SLC38A6-209ENST00000526539 ADGRD1Q6QNK2 874 aa13.18□□□□□ -0.3
SLC38A6-209ENST00000526539 TESPA1A2RU30 521 aaPredicted RBP13.17□□□□□ -0.3
SLC38A6-209ENST00000526539 ZBED2Q9BTP6 218 aa13.16□□□□□ -0.3
SLC38A6-209ENST00000526539 SLC4A5Q9BY07 1137 aa13.16□□□□□ -0.3
SLC38A6-209ENST00000526539 VPS9D1Q9Y2B5 631 aa13.15□□□□□ -0.3
SLC38A6-209ENST00000526539 PLSCR2Q9NRY7 297 aa13.14□□□□□ -0.31
SLC38A6-209ENST00000526539 HRO43593 1189 aa13.11□□□□□ -0.31
SLC38A6-209ENST00000526539 CDHR5Q9HBB8 845 aa13.11□□□□□ -0.31
SLC38A6-209ENST00000526539 MMRN1Q13201 1228 aa13.09□□□□□ -0.31
SLC38A6-209ENST00000526539 PROX2Q3B8N5 592 aa13.09□□□□□ -0.31
SLC38A6-209ENST00000526539 SMYD5Q6GMV2 418 aa13.08□□□□□ -0.32
SLC38A6-209ENST00000526539 CERKQ8TCT0 537 aa13.07□□□□□ -0.32
SLC38A6-209ENST00000526539 NPDC1Q9NQX5 325 aaPredicted RBP13.05□□□□□ -0.32
SLC38A6-209ENST00000526539 MYT1LQ9UL68 1186 aa13.05□□□□□ -0.32
SLC38A6-209ENST00000526539 BHMG1C9JSJ3 638 aaPredicted RBP13.04□□□□□ -0.32
SLC38A6-209ENST00000526539 TRIM6-TRIM34B2RNG4 842 aa13.03□□□□□ -0.32
SLC38A6-209ENST00000526539 ONECUT3O60422 494 aaPredicted RBP13.03□□□□□ -0.32
SLC38A6-209ENST00000526539 RBM26Q5T8P6 1007 aaKnown RBP13.03□□□□□ -0.32
SLC38A6-209ENST00000526539 RABGEF1Q9UJ41 708 aa13.03□□□□□ -0.32
SLC38A6-209ENST00000526539 PRSS12P56730 875 aa13.02□□□□□ -0.33
SLC38A6-209ENST00000526539 NUTM2FA1L443 756 aa13.01□□□□□ -0.33
SLC38A6-209ENST00000526539 CDCA7LQ96GN5 454 aa13.01□□□□□ -0.33
SLC38A6-209ENST00000526539 KIAA1468Q9P260 1216 aa13.01□□□□□ -0.33
SLC38A6-209ENST00000526539 TSKSQ9UJT2 592 aa13.01□□□□□ -0.33
SLC38A6-209ENST00000526539 PTGDRQ13258 359 aa13□□□□□ -0.33
SLC38A6-209ENST00000526539 STAC3Q96MF2 364 aa13□□□□□ -0.33
SLC38A6-209ENST00000526539 RNF166Q96A37 237 aaPredicted RBP12.99□□□□□ -0.33
SLC38A6-209ENST00000526539 NBPF3Q9H094 633 aa12.98□□□□□ -0.33
SLC38A6-209ENST00000526539 RBM27Q9P2N5 1060 aaKnown RBP12.98□□□□□ -0.33
SLC38A6-209ENST00000526539 FAM198AQ9UFP1 575 aa12.98□□□□□ -0.33
SLC38A6-209ENST00000526539 PACS2Q86VP3 889 aa12.96□□□□□ -0.33
SLC38A6-209ENST00000526539 MRPL50Q8N5N7 158 aaKnown RBP12.96□□□□□ -0.33
SLC38A6-209ENST00000526539 TULP1O00294 542 aaPredicted RBP12.95□□□□□ -0.34
SLC38A6-209ENST00000526539 PADI6Q6TGC4 694 aa12.95□□□□□ -0.34
SLC38A6-209ENST00000526539 TTC13Q8NBP0 860 aa12.95□□□□□ -0.34
SLC38A6-209ENST00000526539 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
SLC38A6-209ENST00000526539 FCHSD2O94868 740 aa12.94□□□□□ -0.34
SLC38A6-209ENST00000526539 SCRIBQ14160 1630 aa12.93□□□□□ -0.34
SLC38A6-209ENST00000526539 LAPTM4BQ86VI4 370 aa12.92□□□□□ -0.34
SLC38A6-209ENST00000526539 C3orf80F5H4A9 247 aa12.91□□□□□ -0.34
SLC38A6-209ENST00000526539 GPR37O15354 613 aa12.91□□□□□ -0.34
SLC38A6-209ENST00000526539 SEPT9Q9UHD8 586 aaPredicted RBP12.91□□□□□ -0.34
SLC38A6-209ENST00000526539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
SLC38A6-209ENST00000526539 GPIHBP1Q8IV16 184 aa12.89□□□□□ -0.35
SLC38A6-209ENST00000526539 TATDN2Q93075 761 aa12.89□□□□□ -0.35
SLC38A6-209ENST00000526539 GOLGA8CPA6NN73 597 aa12.88□□□□□ -0.35
SLC38A6-209ENST00000526539 NBPF26B4DH59 902 aa12.88□□□□□ -0.35
SLC38A6-209ENST00000526539 HIC1Q14526 733 aa12.88□□□□□ -0.35
SLC38A6-209ENST00000526539 KCTD12Q96CX2 325 aaKnown RBP12.88□□□□□ -0.35
SLC38A6-209ENST00000526539 SMAPO00193 183 aa12.87□□□□□ -0.35
SLC38A6-209ENST00000526539 FAM98CQ17RN3 349 aaKnown RBP12.87□□□□□ -0.35
SLC38A6-209ENST00000526539 PNMA3Q9UL41 463 aa12.87□□□□□ -0.35
SLC38A6-209ENST00000526539 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
SLC38A6-209ENST00000526539 WNT2BQ93097 391 aa12.85□□□□□ -0.35
SLC38A6-209ENST00000526539 ZFRQ96KR1 1074 aaKnown RBP12.85□□□□□ -0.35
SLC38A6-209ENST00000526539 GNPATO15228 680 aa12.84□□□□□ -0.35
SLC38A6-209ENST00000526539 LMOD2Q6P5Q4 547 aa12.83□□□□□ -0.36
SLC38A6-209ENST00000526539 ADGRG1Q9Y653 693 aa12.82□□□□□ -0.36
SLC38A6-209ENST00000526539 FECHP22830 423 aa12.81□□□□□ -0.36
SLC38A6-209ENST00000526539 THSD4Q6ZMP0 1018 aa12.81□□□□□ -0.36
SLC38A6-209ENST00000526539 ANKK1Q8NFD2 765 aa12.81□□□□□ -0.36
SLC38A6-209ENST00000526539 EYA1Q99502 592 aa12.81□□□□□ -0.36
SLC38A6-209ENST00000526539 FAM161AQ3B820 660 aa12.79□□□□□ -0.36
SLC38A6-209ENST00000526539 HCSTQ9UBK5 93 aa12.78□□□□□ -0.36
SLC38A6-209ENST00000526539 SOWAHBA6NEL2 793 aa12.77□□□□□ -0.37
SLC38A6-209ENST00000526539 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
SLC38A6-209ENST00000526539 BCAMP50895 628 aa12.76□□□□□ -0.37
SLC38A6-209ENST00000526539 RBM46Q8TBY0 533 aaKnown RBP12.76□□□□□ -0.37
SLC38A6-209ENST00000526539 BCANQ96GW7 911 aa12.76□□□□□ -0.37
SLC38A6-209ENST00000526539 PTPN5P54829 565 aa12.74□□□□□ -0.37
SLC38A6-209ENST00000526539 SAMD7Q7Z3H4 446 aa12.74□□□□□ -0.37
SLC38A6-209ENST00000526539 LRCH3Q96II8 777 aa12.74□□□□□ -0.37
SLC38A6-209ENST00000526539 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.74□□□□□ -0.37
SLC38A6-209ENST00000526539 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
SLC38A6-209ENST00000526539 OATP04181 439 aa12.72□□□□□ -0.37
SLC38A6-209ENST00000526539 PXYLP1Q8TE99 480 aa12.71□□□□□ -0.37
SLC38A6-209ENST00000526539 METTL3Q86U44 580 aaKnown RBP12.7□□□□□ -0.38
SLC38A6-209ENST00000526539 RCCD1A6NED2 376 aa12.69□□□□□ -0.38
SLC38A6-209ENST00000526539 DNAJB2P25686 324 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms