RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ASXL2Q76L83 1435 aa13.3□□□□□ -0.28
USP35-201ENST00000526425 WDR7Q9Y4E6 1490 aa13.3□□□□□ -0.28
USP35-201ENST00000526425 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
USP35-201ENST00000526425 KIF3BO15066 747 aa13.29□□□□□ -0.28
USP35-201ENST00000526425 C11orf95C9JLR9 678 aaPredicted RBP13.27□□□□□ -0.29
USP35-201ENST00000526425 SYCP2Q9BX26 1530 aa13.27□□□□□ -0.29
USP35-201ENST00000526425 CCER2I3L3R5 266 aa13.26□□□□□ -0.29
USP35-201ENST00000526425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.26□□□□□ -0.29
USP35-201ENST00000526425 SCAPERQ9BY12 1400 aa13.26□□□□□ -0.29
USP35-201ENST00000526425 PDE4CQ08493 712 aa13.26□□□□□ -0.29
USP35-201ENST00000526425 CCDC184Q52MB2 194 aa13.26□□□□□ -0.29
USP35-201ENST00000526425 ADCY10Q96PN6 1610 aa13.25□□□□□ -0.29
USP35-201ENST00000526425 FAM69CQ0P6D2 419 aa13.25□□□□□ -0.29
USP35-201ENST00000526425 KANK1Q14678 1352 aa13.24□□□□□ -0.29
USP35-201ENST00000526425 FANCAO15360 1455 aa13.24□□□□□ -0.29
USP35-201ENST00000526425 ST20-MTHFSA0A0A6YYL1 179 aa13.24□□□□□ -0.29
USP35-201ENST00000526425 GGT6Q6P531 493 aa13.24□□□□□ -0.29
USP35-201ENST00000526425 KIAA1107Q9UPP5 1409 aa13.24□□□□□ -0.29
USP35-201ENST00000526425 CD109Q6YHK3 1445 aa13.24□□□□□ -0.29
USP35-201ENST00000526425 ZCCHC11Q5TAX3 1644 aaKnown RBP13.23□□□□□ -0.29
USP35-201ENST00000526425 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
USP35-201ENST00000526425 TTC37Q6PGP7 1564 aa13.23□□□□□ -0.29
USP35-201ENST00000526425 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
USP35-201ENST00000526425 ADGRL1O94910 1474 aa13.22□□□□□ -0.29
USP35-201ENST00000526425 ADGRL2O95490 1459 aa13.22□□□□□ -0.29
USP35-201ENST00000526425 MBD5Q9P267 1494 aa13.22□□□□□ -0.29
USP35-201ENST00000526425 CC2D1BQ5T0F9 858 aaKnown RBP13.22□□□□□ -0.29
USP35-201ENST00000526425 NOP58Q9Y2X3 529 aaKnown RBP13.22□□□□□ -0.29
USP35-201ENST00000526425 CDC42BPAQ5VT25 1732 aa13.21□□□□□ -0.29
USP35-201ENST00000526425 KIF7Q2M1P5 1343 aa13.21□□□□□ -0.3
USP35-201ENST00000526425 TRAPPC8Q9Y2L5 1435 aa13.21□□□□□ -0.3
USP35-201ENST00000526425 ARID4BQ4LE39 1312 aaPredicted RBP13.2□□□□□ -0.3
USP35-201ENST00000526425 KDM6BO15054 1643 aa13.2□□□□□ -0.3
USP35-201ENST00000526425 GCC2Q8IWJ2 1684 aa13.19□□□□□ -0.3
USP35-201ENST00000526425 CCDC144AA2RUR9 1427 aa13.19□□□□□ -0.3
USP35-201ENST00000526425 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
USP35-201ENST00000526425 PRKRIP1Q9H875 184 aaPredicted RBP13.19□□□□□ -0.3
USP35-201ENST00000526425 BRPF3Q9ULD4 1205 aa13.19□□□□□ -0.3
USP35-201ENST00000526425 ROCK2O75116 1388 aaKnown RBP13.19□□□□□ -0.3
USP35-201ENST00000526425 USP47Q96K76 1375 aa13.19□□□□□ -0.3
USP35-201ENST00000526425 RAPGEF3O95398 923 aa13.19□□□□□ -0.3
USP35-201ENST00000526425 SAMD9LQ8IVG5 1584 aa13.18□□□□□ -0.3
USP35-201ENST00000526425 PREX2Q70Z35 1606 aa13.18□□□□□ -0.3
USP35-201ENST00000526425 NPM2Q86SE8 214 aaKnown RBP13.18□□□□□ -0.3
USP35-201ENST00000526425 CCDC7Q96M83 1385 aa13.17□□□□□ -0.3
USP35-201ENST00000526425 LAS1LQ9Y4W2 734 aaKnown RBP13.17□□□□□ -0.3
USP35-201ENST00000526425 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
USP35-201ENST00000526425 MYO5CQ9NQX4 1742 aa13.16□□□□□ -0.3
USP35-201ENST00000526425 BCL11BQ9C0K0 894 aaPredicted RBP13.16□□□□□ -0.3
USP35-201ENST00000526425 ARHGEF5Q12774 1597 aa13.15□□□□□ -0.3
USP35-201ENST00000526425 NBPF1Q3BBV0 1214 aa13.15□□□□□ -0.3
USP35-201ENST00000526425 ESF1Q9H501 851 aaKnown RBP13.15□□□□□ -0.31
USP35-201ENST00000526425 NEFMP07197 916 aa13.14□□□□□ -0.31
USP35-201ENST00000526425 PZPP20742 1482 aa13.14□□□□□ -0.31
USP35-201ENST00000526425 NUTM2DQ5VT03 806 aaPredicted RBP13.14□□□□□ -0.31
USP35-201ENST00000526425 RPRD2Q5VT52 1461 aaKnown RBP13.13□□□□□ -0.31
USP35-201ENST00000526425 WASHC2CQ9Y4E1 1318 aa13.13□□□□□ -0.31
USP35-201ENST00000526425 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
USP35-201ENST00000526425 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
USP35-201ENST00000526425 ADGBQ8N7X0 1667 aa13.12□□□□□ -0.31
USP35-201ENST00000526425 B4GALNT3Q6L9W6 998 aa13.12□□□□□ -0.31
USP35-201ENST00000526425 RBM10P98175 930 aaKnown RBP13.11□□□□□ -0.31
USP35-201ENST00000526425 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
USP35-201ENST00000526425 ARHGEF12Q9NZN5 1544 aa13.11□□□□□ -0.31
USP35-201ENST00000526425 DUOX2Q9NRD8 1548 aa13.11□□□□□ -0.31
USP35-201ENST00000526425 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
USP35-201ENST00000526425 MLECQ14165 292 aa13.1□□□□□ -0.31
USP35-201ENST00000526425 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
USP35-201ENST00000526425 TNNT2P45379 298 aaPredicted RBP13.09□□□□□ -0.31
USP35-201ENST00000526425 ERBINQ96RT1 1412 aa13.09□□□□□ -0.31
USP35-201ENST00000526425 CNTLNQ9NXG0 1405 aa13.09□□□□□ -0.31
USP35-201ENST00000526425 ABCC1P33527 1531 aa13.08□□□□□ -0.32
USP35-201ENST00000526425 PDIA4P13667 645 aaKnown RBP13.08□□□□□ -0.32
USP35-201ENST00000526425 SAFB2Q14151 953 aaKnown RBP eCLIP13.08□□□□□ -0.32
USP35-201ENST00000526425 RTEL1-TNFRSF6BF6WH68 1400 aa13.08□□□□□ -0.32
USP35-201ENST00000526425 ZNF518AQ6AHZ1 1483 aa13.08□□□□□ -0.32
USP35-201ENST00000526425 DHX29Q7Z478 1369 aaKnown RBP13.08□□□□□ -0.32
USP35-201ENST00000526425 FAM135AQ9P2D6 1515 aa13.07□□□□□ -0.32
USP35-201ENST00000526425 ANP32AP39687 249 aaKnown RBP13.07□□□□□ -0.32
USP35-201ENST00000526425 DENND4BO75064 1496 aaPredicted RBP13.06□□□□□ -0.32
USP35-201ENST00000526425 ARXQ96QS3 562 aa13.06□□□□□ -0.32
USP35-201ENST00000526425 TMF1P82094 1093 aa13.05□□□□□ -0.32
USP35-201ENST00000526425 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
USP35-201ENST00000526425 KNSTRNQ9Y448 316 aa13.05□□□□□ -0.32
USP35-201ENST00000526425 CROCC2H7BZ55 1655 aa13.05□□□□□ -0.32
USP35-201ENST00000526425 ARAP3Q8WWN8 1544 aa13.04□□□□□ -0.32
USP35-201ENST00000526425 PANK3Q9H999 370 aa13.04□□□□□ -0.32
USP35-201ENST00000526425 NAP1L5Q96NT1 182 aaPredicted RBP13.03□□□□□ -0.32
USP35-201ENST00000526425 ATP7AQ04656 1500 aa13.03□□□□□ -0.32
USP35-201ENST00000526425 WDR43Q15061 677 aaKnown RBP eCLIP13.02□□□□□ -0.32
USP35-201ENST00000526425 ABCA9Q8IUA7 1624 aa13.01□□□□□ -0.33
USP35-201ENST00000526425 HSP90AA2PQ14568 343 aaPredicted RBP13.01□□□□□ -0.33
USP35-201ENST00000526425 A2MP01023 1474 aa13.01□□□□□ -0.33
USP35-201ENST00000526425 STK26Q9P289 416 aa13□□□□□ -0.33
USP35-201ENST00000526425 POGZQ7Z3K3 1410 aa12.99□□□□□ -0.33
USP35-201ENST00000526425 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
USP35-201ENST00000526425 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
USP35-201ENST00000526425 MAST1Q9Y2H9 1570 aa12.99□□□□□ -0.33
USP35-201ENST00000526425 TEX14Q8IWB6 1497 aa12.99□□□□□ -0.33
USP35-201ENST00000526425 FGD1P98174 961 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms