RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
CLNS1A-205ENST00000526009 SPATA31D1Q6ZQQ2 1576 aa12.41□□□□□ -0.42
CLNS1A-205ENST00000526009 TRAPPC8Q9Y2L5 1435 aa12.39□□□□□ -0.43
CLNS1A-205ENST00000526009 NUBP1P53384 320 aa12.39□□□□□ -0.43
CLNS1A-205ENST00000526009 CIZ1Q9ULV3 898 aaPredicted RBP12.39□□□□□ -0.43
CLNS1A-205ENST00000526009 MYO5CQ9NQX4 1742 aa12.39□□□□□ -0.43
CLNS1A-205ENST00000526009 FMN1Q68DA7 1419 aa12.38□□□□□ -0.43
CLNS1A-205ENST00000526009 ARHGAP5Q13017 1502 aa12.38□□□□□ -0.43
CLNS1A-205ENST00000526009 LTBP4Q8N2S1 1624 aa12.38□□□□□ -0.43
CLNS1A-205ENST00000526009 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
CLNS1A-205ENST00000526009 KDM5CP41229 1560 aa12.38□□□□□ -0.43
CLNS1A-205ENST00000526009 IQSEC2Q5JU85 1478 aa12.37□□□□□ -0.43
CLNS1A-205ENST00000526009 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
CLNS1A-205ENST00000526009 REREQ9P2R6 1566 aa12.36□□□□□ -0.43
CLNS1A-205ENST00000526009 MLH3Q9UHC1 1453 aa12.36□□□□□ -0.43
CLNS1A-205ENST00000526009 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
CLNS1A-205ENST00000526009 CLIP1P30622 1438 aa12.36□□□□□ -0.43
CLNS1A-205ENST00000526009 C3P01024 1663 aa12.35□□□□□ -0.43
CLNS1A-205ENST00000526009 DIP2CQ9Y2E4 1556 aa12.35□□□□□ -0.43
CLNS1A-205ENST00000526009 RASEFQ8IZ41 740 aa12.35□□□□□ -0.43
CLNS1A-205ENST00000526009 KIF14Q15058 1648 aa12.35□□□□□ -0.43
CLNS1A-205ENST00000526009 NCOA1Q15788 1441 aa12.35□□□□□ -0.43
CLNS1A-205ENST00000526009 AGLP35573 1532 aa12.34□□□□□ -0.43
CLNS1A-205ENST00000526009 CNTLNQ9NXG0 1405 aa12.34□□□□□ -0.43
CLNS1A-205ENST00000526009 UBAP1LF5GYI3 381 aa12.33□□□□□ -0.44
CLNS1A-205ENST00000526009 HAX1O00165 279 aa12.33□□□□□ -0.44
CLNS1A-205ENST00000526009 FAM212AQ96EL1 285 aa12.33□□□□□ -0.44
CLNS1A-205ENST00000526009 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
CLNS1A-205ENST00000526009 ABCA6Q8N139 1617 aa12.32□□□□□ -0.44
CLNS1A-205ENST00000526009 GSE1Q14687 1217 aa12.31□□□□□ -0.44
CLNS1A-205ENST00000526009 ARHGAP35Q9NRY4 1499 aa12.31□□□□□ -0.44
CLNS1A-205ENST00000526009 NCKAP5LQ9HCH0 1330 aa12.31□□□□□ -0.44
CLNS1A-205ENST00000526009 ZMYM3Q14202 1370 aa12.3□□□□□ -0.44
CLNS1A-205ENST00000526009 NPATQ14207 1427 aa12.3□□□□□ -0.44
CLNS1A-205ENST00000526009 ZNF335Q9H4Z2 1342 aaPredicted RBP12.3□□□□□ -0.44
CLNS1A-205ENST00000526009 CAMSAP1Q5T5Y3 1602 aa12.29□□□□□ -0.44
CLNS1A-205ENST00000526009 PAK3O75914 559 aaPredicted RBP12.28□□□□□ -0.44
CLNS1A-205ENST00000526009 PKD2Q13563 968 aa12.28□□□□□ -0.44
CLNS1A-205ENST00000526009 CDC42BPBQ9Y5S2 1711 aa12.28□□□□□ -0.44
CLNS1A-205ENST00000526009 ABCC1P33527 1531 aa12.27□□□□□ -0.44
CLNS1A-205ENST00000526009 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
CLNS1A-205ENST00000526009 ZNF777Q9ULD5 760 aaPredicted RBP12.26□□□□□ -0.45
CLNS1A-205ENST00000526009 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
CLNS1A-205ENST00000526009 SPAG9O60271 1321 aaKnown RBP12.25□□□□□ -0.45
CLNS1A-205ENST00000526009 PREX2Q70Z35 1606 aa12.24□□□□□ -0.45
CLNS1A-205ENST00000526009 ITSN2Q9NZM3 1697 aa12.23□□□□□ -0.45
CLNS1A-205ENST00000526009 PLA2R1Q13018 1463 aa12.23□□□□□ -0.45
CLNS1A-205ENST00000526009 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
CLNS1A-205ENST00000526009 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
CLNS1A-205ENST00000526009 ECM2O94769 699 aaPredicted RBP12.23□□□□□ -0.45
CLNS1A-205ENST00000526009 HNRNPMP52272 730 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLNS1A-205ENST00000526009 MROH2AA6NES4 1674 aa12.22□□□□□ -0.45
CLNS1A-205ENST00000526009 GGT6Q6P531 493 aa12.22□□□□□ -0.45
CLNS1A-205ENST00000526009 ZRANB1Q9UGI0 708 aa12.22□□□□□ -0.45
CLNS1A-205ENST00000526009 CCDC18Q5T9S5 1454 aa12.21□□□□□ -0.45
CLNS1A-205ENST00000526009 LRRIQ1Q96JM4 1722 aa12.21□□□□□ -0.45
CLNS1A-205ENST00000526009 HSPA1LP34931 641 aa12.21□□□□□ -0.45
CLNS1A-205ENST00000526009 SAMD9LQ8IVG5 1584 aa12.21□□□□□ -0.46
CLNS1A-205ENST00000526009 TCOF1Q13428 1488 aaKnown RBP12.21□□□□□ -0.46
CLNS1A-205ENST00000526009 TOM1O60784 492 aa12.2□□□□□ -0.46
CLNS1A-205ENST00000526009 PIP4K2BP78356 416 aa12.2□□□□□ -0.46
CLNS1A-205ENST00000526009 PTPRKQ15262 1439 aa12.2□□□□□ -0.46
CLNS1A-205ENST00000526009 CASKIN1Q8WXD9 1431 aa12.2□□□□□ -0.46
CLNS1A-205ENST00000526009 CEP170BQ9Y4F5 1589 aaPredicted RBP12.19□□□□□ -0.46
CLNS1A-205ENST00000526009 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
CLNS1A-205ENST00000526009 SUPT6HQ7KZ85 1726 aaKnown RBP12.18□□□□□ -0.46
CLNS1A-205ENST00000526009 PYGBP11216 843 aa12.18□□□□□ -0.46
CLNS1A-205ENST00000526009 A2MP01023 1474 aa12.18□□□□□ -0.46
CLNS1A-205ENST00000526009 CDC42BPAQ5VT25 1732 aa12.17□□□□□ -0.46
CLNS1A-205ENST00000526009 SYCP2Q9BX26 1530 aa12.17□□□□□ -0.46
CLNS1A-205ENST00000526009 GPATCH8Q9UKJ3 1502 aaKnown RBP12.17□□□□□ -0.46
CLNS1A-205ENST00000526009 CLTCQ00610 1675 aaKnown RBP12.17□□□□□ -0.46
CLNS1A-205ENST00000526009 CFDP1Q9UEE9 299 aaPredicted RBP12.17□□□□□ -0.46
CLNS1A-205ENST00000526009 MYO3AQ8NEV4 1616 aa12.17□□□□□ -0.46
CLNS1A-205ENST00000526009 KIAA1107Q9UPP5 1409 aa12.17□□□□□ -0.46
CLNS1A-205ENST00000526009 ZNF142P52746 1687 aaPredicted RBP12.16□□□□□ -0.46
CLNS1A-205ENST00000526009 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
CLNS1A-205ENST00000526009 CCDC61Q9Y6R9 512 aa12.15□□□□□ -0.46
CLNS1A-205ENST00000526009 PLEKHH2Q8IVE3 1493 aa12.14□□□□□ -0.47
CLNS1A-205ENST00000526009 PLXNC1O60486 1568 aa12.14□□□□□ -0.47
CLNS1A-205ENST00000526009 EVX2Q03828 476 aa12.14□□□□□ -0.47
CLNS1A-205ENST00000526009 A2ML1A8K2U0 1454 aa12.14□□□□□ -0.47
CLNS1A-205ENST00000526009 MED1Q15648 1581 aaPredicted RBP12.13□□□□□ -0.47
CLNS1A-205ENST00000526009 CPS1P31327 1500 aa12.13□□□□□ -0.47
CLNS1A-205ENST00000526009 SHANK2Q9UPX8 1470 aa12.13□□□□□ -0.47
CLNS1A-205ENST00000526009 ANKLE2Q86XL3 938 aa12.12□□□□□ -0.47
CLNS1A-205ENST00000526009 CCNB3Q8WWL7 1395 aa12.12□□□□□ -0.47
CLNS1A-205ENST00000526009 DNMT1P26358 1616 aaKnown RBP12.11□□□□□ -0.47
CLNS1A-205ENST00000526009 INO80Q9ULG1 1556 aaPredicted RBP12.11□□□□□ -0.47
CLNS1A-205ENST00000526009 FYCO1Q9BQS8 1478 aa12.11□□□□□ -0.47
CLNS1A-205ENST00000526009 FBXO31Q5XUX0 539 aaPredicted RBP12.11□□□□□ -0.47
CLNS1A-205ENST00000526009 TNRQ92752 1358 aa12.1□□□□□ -0.47
CLNS1A-205ENST00000526009 THEMISQ8N1K5 641 aaPredicted RBP12.1□□□□□ -0.47
CLNS1A-205ENST00000526009 KIF3BO15066 747 aa12.09□□□□□ -0.47
CLNS1A-205ENST00000526009 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
CLNS1A-205ENST00000526009 ZNF644Q9H582 1327 aaPredicted RBP12.09□□□□□ -0.47
CLNS1A-205ENST00000526009 DHX29Q7Z478 1369 aaKnown RBP12.08□□□□□ -0.48
CLNS1A-205ENST00000526009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLNS1A-205ENST00000526009 RGL2O15211 777 aa12.08□□□□□ -0.48
CLNS1A-205ENST00000526009 CHRM1P11229 460 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms